BAC Information

Click to search

BAC

Clone NameB6Ng01-130N05
Chromosome2 (Build37)
Map Location 76,487,449 - 76,643,559
singlet/doubletdoublet
Overlap geneDfnb59, Fkbp7, Plekha3, Ttn
Upstream geneLOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1, Pde11a, Cyct, Drbp1, Osbpl6, Prkra
Downstream gene2610301F02Rik, Sestd1, LOC623706, LOC667906, Zfp533
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130N05.bB6Ng01-130N05.g
ACCDH932041DH932042
length1,1581,055
definitionDH932041|Mus musculus domesticus DNA, BAC clone: B6Ng01-130N05, 5' end.DH932042|Mus musculus domesticus DNA, BAC clone: B6Ng01-130N05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,487,449 - 76,488,615)(76,642,476 - 76,643,559)
sequence
gaattctactggggcttaggttaagcctattctcgcttttatttctgtat
aatatacacgggttacaatccaataatgctattacacttatgtgttaatg
aatatcgtattgtaacaaccacagagacactcaaaatatatcaaccacct
atggccagacagtataggtttgtttctagaatttaatttaatggattcac
aaaatttccttgaaaataagccaaaactttatgtaactattttataggta
gagtaattggatagcaatgagcaacaaaaaggaggtaaaattcagcagga
ctcttatcagttgatgtagtctgagctattagtttcagagttagaacctt
ccatagtagtttttaatatgtaatgtaatagtaactaaaaagccttcaag
accctatagagatctgcacccaattgtttttctctatagtctgtgaattg
atatgtggtactaaacatatagtttcacaagcatacaaaaatctggatga
gagacatgcctgtgttaggatctgtacactgtgaagcttcaaaaagtact
tttctgctgccaaaattcacctgctggacttgtgaaagaattcctcttgg
atgatggccactgcagatcatatccaggcctaatgttagattagagccca
cttgcaccgtttgctgtgagcctccttccaactggctcattgctgggggg
aaagccctttcaactgtggtctcctcaaggactttggtagtttgaattag
ttttctctatatattttagttctgtaggctgccattccgagttagacttg
cttttagtgtatcatttacactaccatctattattcattacccgagttca
tgaagggaggtgctgttgtgaattgcacaccagcaaactacttggtgagc
gtgggctttatagttctaacctgcgtaactgtatttaacatcaaggaagg
cttagtttggtgtctgattctcttcttcaaaatgggttcgttgcctgagg
gtcgcagttgatgacatctgatattaatatgttgctgctgctaccagggc
tcgttaagcaagttgagaatgaaaggagattaagtcttgtccaagctcag
cgagcctgacaagtacccacccctgagattggtggtgaaaagaagcgggg
tttctgtt
gaattctttattagaaaagaaaagtgactcttcattctaatgcaaaaact
ctactaaagtagacttaaaggtagattcctgaaaaccttgcatttgattt
acccagaggggaaaatctattatcattaaattcttgcctagagttagaac
gggtggggccacaggatctgagggctgctctgagtccctgtacttaggaa
tgttaatccgcccttgtatctcccagaataggaatccttttaggaacttg
ttcttgtaccccttaaatgtctcttttcaaaaggaatttgggaacaaatg
taaagttacaagttcacttattacattttatagattttgtttaaattaag
tctattaagcacaaacttgttcttgtcagtttaattcaggccttatatcc
atactctgtaaaatctttaacctctccaccaacagacagacagaaagaca
aaacagcatgcagacatgggtactggaagacagcattttagaaataaact
ataattttccttcacttttgttttttatcccttttggccaagtaaaattg
ctaaattctcagtggctattagtaattttgatagcttggtaatgccttct
gtgttcctccagtactccctattataaactaatattttaaagaattactg
ttcataatattattacatattctaccaaaaatatttggcattcattttgt
tgatttgttttatctatctattgtatttcccttttttgtttgcttttcat
ttgactaaactgactatattttacctaagccatttattgaaaacccagtt
tattcttggcaacacactcaatgacacaggaatatattatattttgtata
ttgattttatatacatatttaaaatgtataacatatatggctcagaatat
tcagatgcaaatcaatgcattaaagatataatacctgtggcatgtgttag
aacaagttattcaaatgttaagccaagttccaatcaagcgacttttgaat
gtccattcagcctctggctcgtaagaagcgctgtgacaaggctaagtcta
actac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_76487449_76488615
seq2: B6Ng01-130N05.b_48_1205

seq1  GAATTCTACTGGGGCTTAGGTTAAGCCTATTCTCGCTTTTATTTCTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGGGGCTTAGGTTAAGCCTATTCTCGCTTTTATTTCTGTAT  50

seq1  AATATACACGGGTTACAATCCAATAATGCTATTACACTTATGTGTTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACACGGGTTACAATCCAATAATGCTATTACACTTATGTGTTAATG  100

seq1  AATATCGTATTGTAACAACCACAGAGACACTCAAAATATATCAACCACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCGTATTGTAACAACCACAGAGACACTCAAAATATATCAACCACCT  150

seq1  ATGGCCAGACAGTATAGGTTTGTTTCTAGAATTTAATTTAATGGATTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCAGACAGTATAGGTTTGTTTCTAGAATTTAATTTAATGGATTCAC  200

seq1  AAAATTTCCTTGAAAATAAGCCAAAACTTTATGTAACTATTTTATAGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTCCTTGAAAATAAGCCAAAACTTTATGTAACTATTTTATAGGTA  250

seq1  GAGTAATTGGATAGCAATGAGCAACAAAAAGGAGGTAAAATTCAGCAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAATTGGATAGCAATGAGCAACAAAAAGGAGGTAAAATTCAGCAGGA  300

seq1  CTCTTATCAGTTGATGTAGTCTGAGCTATTAGTTTCAGAGTTAGAACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCAGTTGATGTAGTCTGAGCTATTAGTTTCAGAGTTAGAACCTT  350

seq1  CCATAGTAGTTTTTAATATGTAATGTAATAGTAACTAAAAAGCCTTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTAGTTTTTAATATGTAATGTAATAGTAACTAAAAAGCCTTCAAG  400

seq1  ACCCTATAGAGATCTGCACCCAATTGTTTTTCTCTATAGTCTGTGAATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATAGAGATCTGCACCCAATTGTTTTTCTCTATAGTCTGTGAATTG  450

seq1  ATATGTGGTACTAAACATATAGTTTCACAAGCATACAAAAATCTGGATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGGTACTAAACATATAGTTTCACAAGCATACAAAAATCTGGATGA  500

seq1  GAGACATGCCTGTGTTAGGATCTGTACACTGTGAAGCTTCAAAAAGTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATGCCTGTGTTAGGATCTGTACACTGTGAAGCTTCAAAAAGTACT  550

seq1  TTTCTGCTGCCAAAATTCACCTGCTGGACTTGTGAAAGAATTCCTCTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTGCCAAAATTCACCTGCTGGACTTGTGAAAGAATTCCTCTTGG  600

seq1  ATGATGGCCACTGCAGATCATATCCAGGCCTAATGTTAGATTAGAGCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGCCACTGCAGATCATATCCAGGCCTAATGTTAGATTAGAGCCCA  650

seq1  CTTGCACCGTTTGCTGTGAGCCTCCTTCCAACTGGCTCATTGCTGGGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCACCGTTTGCTGTGAGCCTCCTTCCAACTGGCTCATTGCTGGGGGG  700

seq1  AAAGCCCTTTCAACTGTGGTCTCCTCAAGGACTTTGGTAGTTTGAATTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCTTTCAACTGTGGTCTCCTCAAGGACTTTGGTAGTTTGAATTAG  750

seq1  TTTTCTCTATATATTTTAGTTCTGTAGGCTGCCATTCCGAGTTAGACTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCTATATATTTTAGTTCTGTAGGCTGCCATTCCGAGTTAGACTTG  800

seq1  CTTTTAGTGTATCATTTACACTACCATCTATTATTCATTACCCGAGTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTGTATCATTTACACTACCATCTATTATTCATTACCCGAGTTCA  850

seq1  TGAAGGGAGGTGCTGTTGTGAATTGCACACCAGCAAACTACTTGGTGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGAGGTGCTGTTGTGAATTGCACACCAGCAAACTACTTGGTGAGC  900

seq1  GTGGGCTTTATAGTTCTAACCTGCGTAACTGTATTTAACATCAAGGAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCTTTATAGTTCTAACCTGCGTAACTGTATTTAACATCAAGGAAGG  950

seq1  CTTAGTTTGGTGTCTGATTCTCTTCTTCAAAAATGGGTTCGTTGCCTGAG  1000
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTAGTTTGGTGTCTGATTCTCTTCTTC-AAAATGGGTTCGTTGCCTGAG  999

seq1  GGTCGCAGTTGATGACATCTTGATATTAATATGTTTGCTGCTGCTACCAA  1050
      ||||||||||||||||||| ||||||||||||| |||||||||||||| |
seq2  GGTCGCAGTTGATGACATC-TGATATTAATATG-TTGCTGCTGCTACC-A  1046

seq1  GAGCTTCGTTAAGCAAGTTGGAGATGGAGGGAGATTAGTCCCTGTCCCAA  1100
      | || |||||||||||||||   ||| | ||||||||   | ||| ||||
seq2  GGGC-TCGTTAAGCAAGTTGAGAATGAAAGGAGATTAAGTCTTGT-CCAA  1094

seq1  GCCTCAGCGAAGCTGACAAGTACCAACCCCTGAGTCTGGTGGTGAAAAAG  1150
      | ||||||||  |||||||||||| |||||||||  |||||||| |||||
seq2  G-CTCAGCGAGCCTGACAAGTACCCACCCCTGAGATTGGTGGTG-AAAAG  1142

seq1  AAGCGGTGTTTTCTGTT  1167
      |||||| | ||||||||
seq2  AAGCGG-GGTTTCTGTT  1158

seq1: chr2_76642476_76643559
seq2: B6Ng01-130N05.g_68_1122 (reverse)

seq1  GTAGTTAAGACTTAGCCTAGTACACAGCTGCTACTTATCTGAGGACAGAG  50
      |||||| ||||||||||| || |||||| ||| ||||   || | |||| 
seq2  GTAGTT-AGACTTAGCCTTGT-CACAGC-GCTTCTTA--CGA-GCCAGA-  43

seq1  GGCTGAATGGGACATTTCAAAAATGTCTGACTTTGAATTTTGAACTTTGG  100
      |||||||| ||||| ||||||| |  |     ||||  || |||| ||||
seq2  GGCTGAAT-GGACA-TTCAAAAGTCGC-----TTGA--TTGGAAC-TTGG  83

seq1  CTTATAACTATTTAAAATAAACTTGTTTCTAACACATG-CACAAGTATTT  149
      ||  |||| |||| ||   |||||| |||||||||||| |||| ||||| 
seq2  CT--TAAC-ATTTGAA--TAACTTG-TTCTAACACATGCCACAGGTATT-  126

seq1  AATATCTATTAATGCATTGATTTGCCATCTGAATTATTCTGAGACATATA  199
       |||||| |||||||||||||||| |||||||| ||||||||| ||||||
seq2  -ATATCT-TTAATGCATTGATTTG-CATCTGAA-TATTCTGAGCCATATA  172

seq1  TGTTATACATTATAAATATGTATATAAATATACAATATACATATATATAT  249
      ||||||||||| |||||||||||||||| || ||||||||| | ||||| 
seq2  TGTTATACATTTTAAATATGTATATAAA-AT-CAATATACA-AAATATAA  219

seq1  AATATT-CTGTGTCATTGAGTGTGTTGCCAAGAATATACTGGGTTTTCAA  298
       ||||| ||||||||||||||||||||||||||||| |||||||||||||
seq2  TATATTCCTGTGTCATTGAGTGTGTTGCCAAGAATAAACTGGGTTTTCAA  269

seq1  TAAATGGCTTAGGTAAAATATAGTCAGTTTAGTCAAATGAAAAGCAAACA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGCTTAGGTAAAATATAGTCAGTTTAGTCAAATGAAAAGCAAACA  319

seq1  AAAAAAGGAAATACAATAGATAGATAAAACAAATCAACAAAATGAATGCC  398
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGGAAATACAATAGATAGATAAAACAAATCAACAAAATGAATGCC  369

seq1  AAATATTTTTGGTAGAATATGTAATAATATTATGAACAGTAATTCTTTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTTGGTAGAATATGTAATAATATTATGAACAGTAATTCTTTAA  419

seq1  AATATTAGTTTATAATAGGGAGTACTGGAGGAACACAGAAGGCATTACCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGTTTATAATAGGGAGTACTGGAGGAACACAGAAGGCATTACCA  469

seq1  AGCTATCAAAATTACTAATAGCCACTGAGAATTTAGCAATTTTACTTGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATCAAAATTACTAATAGCCACTGAGAATTTAGCAATTTTACTTGGC  519

seq1  CAAAAGGGATAAAAAACAAAAGTGAAGGAAAATTATAGTTTATTTCTAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGGGATAAAAAACAAAAGTGAAGGAAAATTATAGTTTATTTCTAAA  569

seq1  ATGCTGTCTTCCAGTACCCATGTCTGCATGCTGTTTTGTCTTTCTGTCTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTCTTCCAGTACCCATGTCTGCATGCTGTTTTGTCTTTCTGTCTG  619

seq1  TCTGTTGGTGGAGAGGTTAAAGATTTTACAGAGTATGGATATAAGGCCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGTGGAGAGGTTAAAGATTTTACAGAGTATGGATATAAGGCCTG  669

seq1  AATTAAACTGACAAGAACAAGTTTGTGCTTAATAGACTTAATTTAAACAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAACTGACAAGAACAAGTTTGTGCTTAATAGACTTAATTTAAACAA  719

seq1  AATCTATAAAATGTAATAAGTGAACTTGTAACTTTACATTTGTTCCCAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATAAAATGTAATAAGTGAACTTGTAACTTTACATTTGTTCCCAAA  769

seq1  TTCCTTTTGAAAAGAGACATTTAAGGGGTACAAGAACAAGTTCCTAAAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTGAAAAGAGACATTTAAGGGGTACAAGAACAAGTTCCTAAAAG  819

seq1  GATTCCTATTCTGGGAGATACAAGGGCGGATTAACATTCCTAAGTACAGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTATTCTGGGAGATACAAGGGCGGATTAACATTCCTAAGTACAGG  869

seq1  GACTCAGAGCAGCCCTCAGATCCTGTGGCCCCACCCGTTCTAACTCTAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAGCAGCCCTCAGATCCTGTGGCCCCACCCGTTCTAACTCTAGG  919

seq1  CAAGAATTTAATGATAATAGATTTTCCCCTCTGGGTAAATCAAATGCAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTTAATGATAATAGATTTTCCCCTCTGGGTAAATCAAATGCAAG  969

seq1  GTTTTCAGGAATCTACCTTTAAGTCTACTTTAGTAGAGTTTTTGCATTAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGGAATCTACCTTTAAGTCTACTTTAGTAGAGTTTTTGCATTAG  1019

seq1  AATGAAGAGTCACTTTTCTTTTCTAATAAAGAATTC  1084
      ||||||||||||||||||||||||||||||||||||
seq2  AATGAAGAGTCACTTTTCTTTTCTAATAAAGAATTC  1055