BAC Information

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BAC

Clone NameB6Ng01-131A12
Chromosome2 (Build37)
Map Location 50,550,889 - 50,743,171
singlet/doubletdoublet
Overlap genenone
Upstream geneKif5c, 2310010M24Rik, Lypd6, 2010311D03Rik, LOC666781
Downstream geneLOC227885, Rnd3, LOC666802, LOC666810, LOC100041614, Tas2r134, LOC433426, Ppia-ps2_635.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131A12.bB6Ng01-131A12.g
ACCDH932192DH932193
length1,2441,088
definitionDH932192|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A12, 5' end.DH932193|Mus musculus domesticus DNA, BAC clone: B6Ng01-131A12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,550,889 - 50,552,175)(50,742,076 - 50,743,171)
sequence
gaattctcctagactggagttctaaggggtccccagtggtcttccaccac
caaagagctatctctacctccatgtctcgagggcacatttaagttagcaa
gttctaaatttaagctccaagatcttattcttgtcttatttccttgggtg
gagttaaaagcttactcctccttctatatcctttccactgtatatttata
ttgaatcagctgtatggtcatctagcctatctgtctgctttgtctttcca
tcaataacttcctgttgattgatactggcgaaggcattatggcttattta
aatagattgtttttttaaatatatatatagtttcttttctatccagattt
actctatgcattgttaccaaccgtgcctttgaatgattacaaaatccttc
cagtctcctgtctattcctattcttcggaacgcgattccaaagtgcacac
acaggcatttgcttctactcttcagcatgtttctgtttagtcaaatagta
ctctgtgctgtctcaaatttaaatgtcttctttccagtcacttctgtcat
ttcttcctctgaatttttattcttataactttctcaattattttgctgtc
ccttcttcttcatatgggctttttttttttgatatttcatccagactgat
gtagctttcagtgttttatgtaagtgtaagtttatattcacatggaaatt
tgcctactaacctttccaataagctttaaaacactttgattcctattatt
gtgtcttattcatatttttattctttgagaaatctttcataatatcatgc
acgcagacattcaggaagaatttgttcaaggcagtaacattttaagggtt
ttttttttatcaatgatcatgtggttacaaattatagaactccatatcaa
acataagaagcaaagagctttctggatcacaatgtagcatagagttgaaa
agcaagctacttctctcttttcagttgggataaatgcagctgtatctttg
ttcctttgatcgcagatccttagcttcttctgtgatcgtctgaatgccat
gtggaacttatatccccacctggagtatagaatctgttcaaccaagcaga
aaaacctggacgtctgaatacaactccctctctagaaactgccttaccct
aatcatggactactctcgtccaaatgaggggtgcgaagccttgcactagt
cccatacagattccggacaacttcttggaaaggcaataagatag
gaattccaatgatcccaaaatagaacggaacacagccacactaagaactc
cttcaggtgcatattcctcaggagttcaggcagtggcttcttttcaaggt
gcccctgacacaggtaacagtgaggagtcagtcctcagggctcaagacat
agagctgatctggtgactcttcaagcattgtgtctctgaggttcattccc
tctccacaaaggacttgacagcaatggaagaaatgctagctggaacggtt
ttgaattcagccaaggacagggctcttttgccctgttttcttaataaaca
ttgcatttaacgaacatctctaattttgattatttttatgtatgtgatgg
atcaacacacatccttgattcttacagatattaactgtccctgaggcatt
aggtatacctttcctcagcatcctgttttcttgctattaccttaagtacc
gcacacctcatcagcccatcctaattaagggtgaaagtaaaataataatt
attttacccatggagtccttgtgcaaatccaagctttcttggaagaacaa
atagagcaagtcttccagagcacacaaataaagttctagagccacaagga
tgcaacggtatctcaggatgcttacgtaagggtaagaatttccgaccttc
tccagaggtccaccctatctgaaagcattctttaagtatccaaggtgact
cacatctccttgctgagtggctttgtcttcatcactggtaaccatgccaa
gcctgatgcccccttttcttcttttgacaggcttacattctctgcttggt
taaactatatccaccgacattcactgcctttgcactgacacaaaagagca
tccttataggaaataattccccagaagtataccttagggatgactcccat
cacttgaagctgtgtgctctccatcacagctatagccagagcatcctgta
gagagggcctactgaagttgggacataggatctcaactcactggcacttg
caactgtttttaactcactgtggccaattgaaacggacctcagctgatca
gaaaacctaagtagatttcatttctaggcattttgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_50550889_50552175
seq2: B6Ng01-131A12.b_49_1292

seq1  GAATTCTCCTAGACTGGAGTTCTAAGGGGTCCCCAGTGGTCTTCCACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAGACTGGAGTTCTAAGGGGTCCCCAGTGGTCTTCCACCAC  50

seq1  CAAAGAGCTATCTCTACCTCCATGTCTCGAGGGCACATTTAAGTTAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGCTATCTCTACCTCCATGTCTCGAGGGCACATTTAAGTTAGCAA  100

seq1  GTTCTAAATTTAAGCTCCAAGATCTTATTCTTGTCTTATTTCCTTGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAAATTTAAGCTCCAAGATCTTATTCTTGTCTTATTTCCTTGGGTG  150

seq1  GAGTTAAAAGCTTACTCCTCCTTCTATATCCTTTCCACTGTATATTTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAAAGCTTACTCCTCCTTCTATATCCTTTCCACTGTATATTTATA  200

seq1  TTGAATCAGCTGTATGGTCATCTAGCCTATCTGTCTGCTTTGTCTTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCAGCTGTATGGTCATCTAGCCTATCTGTCTGCTTTGTCTTTCCA  250

seq1  TCAATAACTTCCTGTTGATTGATACTGGCGAAGGCATTATGGCTTATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAACTTCCTGTTGATTGATACTGGCGAAGGCATTATGGCTTATTTA  300

seq1  AATAGATTGTTTTTTTAAATATATATATAGTTTCTTTTCTATCCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTGTTTTTTTAAATATATATATAGTTTCTTTTCTATCCAGATTT  350

seq1  ACTCTATGCATTGTTACCAACCGTGCCTTTGAATGATTACAAAATCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTATGCATTGTTACCAACCGTGCCTTTGAATGATTACAAAATCCTTC  400

seq1  CAGTCTCCTGTCTATTCCTATTCTTCGGAACGCGATTCCAAAGTGCACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCCTGTCTATTCCTATTCTTCGGAACGCGATTCCAAAGTGCACAC  450

seq1  ACAGGCATTTGCTTCTACTCTTCAGCATGTTTCTGTTTAGTCAAATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCATTTGCTTCTACTCTTCAGCATGTTTCTGTTTAGTCAAATAGTA  500

seq1  CTCTGTGCTGTCTCAAATTTAAATGTCTTCTTTCCAGTCACTTCTGTCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCTGTCTCAAATTTAAATGTCTTCTTTCCAGTCACTTCTGTCAT  550

seq1  TTCTTCCTCTGAATTTTTATTCTTATAACTTTCTCAATTATTTTGCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCTGAATTTTTATTCTTATAACTTTCTCAATTATTTTGCTGTC  600

seq1  CCTTCTTCTTCATATGGGCTTTTTTTTTTTGATATTTCATCCAGACTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCTTCATATGGGCTTTTTTTTTTTGATATTTCATCCAGACTGAT  650

seq1  GTAGCTTTCAGTGTTTTATGTAAGTGTAAGTTTATATTCACATGGAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTTCAGTGTTTTATGTAAGTGTAAGTTTATATTCACATGGAAATT  700

seq1  TGCCTACTAACCTTTCCAATAAGCTTTAAAACACTTTGATTCCTATTATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACTAACCTTTCCAATAAGCTTTAAAACACTTTGATTCCTATTATT  750

seq1  GTGTCTTATTCATATTTTTATTCTTTGAGAAATCTTTCATAATATCATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTATTCATATTTTTATTCTTTGAGAAATCTTTCATAATATCATGC  800

seq1  ACGCAGACATTCAGGAAGAATTTGTTCAAGGCAGTAACATTTTAAGGGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGACATTCAGGAAGAATTTGTTCAAGGCAGTAACATTTTAAGGGTT  850

seq1  TTTTTTTTATCAATGATCATGTGGTTACAAATTATAGAACTCCATATCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATCAATGATCATGTGGTTACAAATTATAGAACTCCATATCAA  900

seq1  ACATAAGAAGCAAAGAGCTTTCTGGATCACAATGTAGCATAGAGTTGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGAAGCAAAGAGCTTTCTGGATCACAATGTAGCATAGAGTTGAAA  950

seq1  AGCAAGCCTACTTCTCTCTTTTCAG-TGGGATAAATGCAGCTGTATCTTT  999
      |||||| |||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCAAG-CTACTTCTCTCTTTTCAGTTGGGATAAATGCAGCTGTATCTTT  999

seq1  GTTCCTTTGATTCGCAGATCCTTAGCTTC-TCTGTGATCGTCTGAATGCC  1048
      |||||||||| |||||||||||||||||| ||||||||||||||||||||
seq2  GTTCCTTTGA-TCGCAGATCCTTAGCTTCTTCTGTGATCGTCTGAATGCC  1048

seq1  ATGTGGACCTTATACATCCCCCAACCT-GAGTAATAGTATTCTGTTCAAA  1097
      ||||||| |||||  ||||||  |||| |||| |||| | ||||||||| 
seq2  ATGTGGAACTTAT--ATCCCC--ACCTGGAGT-ATAG-AATCTGTTCAA-  1091

seq1  CCCCAAGCAGAAAACACCT-GACGTCTGAGTACCAAGCCACCTTCTCAGA  1146
        |||||||||||| |||| ||||||||| ||| |   | || ||||  |
seq2  --CCAAGCAGAAAA-ACCTGGACGTCTGAATACAA---CTCCCTCTC-TA  1134

seq1  GAAATCTGGCTTAACGCCTCAGTCCATGTGACTACATCTGGCTCCCAAAA  1196
      |||| ||| ||||   ||| |   |||| |||||| ||| | |||  |||
seq2  GAAA-CTGCCTTA--CCCTAA--TCATG-GACTAC-TCTCG-TCC--AAA  1174

seq1  TATTGAGTGGGGTGCAGAGGCTCATGCACATCTAGTCTCTCATTACAGAT  1246
      |     | |||||||  || ||  ||||   ||||||   |  |||||||
seq2  T-----GAGGGGTGCGAAGCCT--TGCA---CTAGTC---CCATACAGAT  1211

seq1  ATCTGAAGCAAACTTCTTGAGAAGAAAGGAAAATAAGATAG  1287
        | ||    |||||||||    ||||||  ||||||||||
seq2  TCCGGA---CAACTTCTTG----GAAAGG-CAATAAGATAG  1244

seq1: chr2_50742076_50743171
seq2: B6Ng01-131A12.g_71_1158 (reverse)

seq1  CTTCAAAATGCCTTAGAAATGAAATCTACTTAAGTTCTCCTGATCAGCTG  50
      |||||||||||| ||||||||||||||||||| ||| | |||||||||||
seq2  CTTCAAAATGCC-TAGAAATGAAATCTACTTAGGTT-TTCTGATCAGCTG  48

seq1  AGGTTCCGTTTCCATTTGACACAGTGAGTTAAAAAACAGTTGCCAGGTGC  100
      ||| |||||||| ||| | ||||||||||| ||||||||||| || ||| 
seq2  AGG-TCCGTTTCAATTGGCCACAGTGAGTT-AAAAACAGTTG-CAAGTG-  94

seq1  CCAGTGAGTTGAGATTCCTATGTCCCAACTTCAGTAGGCCCTCTTCTACA  150
      |||||||||||||| |||||||||||||||||||||||||||| ||||||
seq2  CCAGTGAGTTGAGA-TCCTATGTCCCAACTTCAGTAGGCCCTC-TCTACA  142

seq1  GGATGCTCTGGCTATTAGCTGTGATGGAGAGCACACAGCTTCAAGTGATG  200
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGATGCTCTGGCTA-TAGCTGTGATGGAGAGCACACAGCTTCAAGTGATG  191

seq1  GGAGTCATCCCTAAGGTATACTTCTGGGGAATTATTTCCTATAAGGATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCATCCCTAAGGTATACTTCTGGGGAATTATTTCCTATAAGGATGC  241

seq1  TCTTTTGTGTCAGTGCAAAGGCAGTGAATGTCGGTGGATATAGTTTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTGTCAGTGCAAAGGCAGTGAATGTCGGTGGATATAGTTTAACC  291

seq1  AAGCAGAGAATGTAAGCCTGTCAAAAGAAGAAAAGGGGGCATCAGGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAGAATGTAAGCCTGTCAAAAGAAGAAAAGGGGGCATCAGGCTTG  341

seq1  GCATGGTTACCAGTGATGAAGACAAAGCCACTCAGCAAGGAGATGTGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTTACCAGTGATGAAGACAAAGCCACTCAGCAAGGAGATGTGAGT  391

seq1  CACCTTGGATACTT-AAGAATGCTTTCAGATAGGGTGGACCTCTGGAGAA  449
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CACCTTGGATACTTAAAGAATGCTTTCAGATAGGGTGGACCTCTGGAGAA  441

seq1  GGTCGGAAATTCTTACCCTTACGTAAGCATCCTGAGATACCGTTGCATCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGGAAATTCTTACCCTTACGTAAGCATCCTGAGATACCGTTGCATCC  491

seq1  TTGTGGCTCTAGAACTTTATTTGTGTGCTCTGGAAGACTTGCTCTATTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCTCTAGAACTTTATTTGTGTGCTCTGGAAGACTTGCTCTATTTG  541

seq1  TTCTTCCAAGAAAGCTTGGATTTGCACAAGGACTCCATGGGTAAAATAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCAAGAAAGCTTGGATTTGCACAAGGACTCCATGGGTAAAATAAT  591

seq1  TATTATTTTACTTTCACCCTTAATTAGGATGGGCTGATGAGGTGTGCGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTTTACTTTCACCCTTAATTAGGATGGGCTGATGAGGTGTGCGGT  641

seq1  ACTTAAGGTAATAGCAAGAAAACAGGATGCTGAGGAAAGGTATACCTAAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAGGTAATAGCAAGAAAACAGGATGCTGAGGAAAGGTATACCTAAT  691

seq1  GCCTCAGGGACAGTTAATATCTGTAAGAATCAAGGATGTGTGTTGATCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGGACAGTTAATATCTGTAAGAATCAAGGATGTGTGTTGATCCA  741

seq1  TCACATACATAAAAATAATCAAAATTAGAGATGTTCGTTAAATGCAATGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACATAAAAATAATCAAAATTAGAGATGTTCGTTAAATGCAATGT  791

seq1  TTATTAAGAAAACAGGGCAAAAGAGCCCTGTCCTTGGCTGAATTCAAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGAAAACAGGGCAAAAGAGCCCTGTCCTTGGCTGAATTCAAAAC  841

seq1  CGTTCCAGCTAGCATTTCTTCCATTGCTGTCAAGTCCTTTGTGGAGAGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCAGCTAGCATTTCTTCCATTGCTGTCAAGTCCTTTGTGGAGAGGG  891

seq1  AATGAACCTCAGAGACACAATGCTTGAAGAGTCACCAGATCAGCTCTATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACCTCAGAGACACAATGCTTGAAGAGTCACCAGATCAGCTCTATG  941

seq1  TCTTGAGCCCTGAGGACTGACTCCTCACTGTTACCTGTGTCAGGGGCACC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGCCCTGAGGACTGACTCCTCACTGTTACCTGTGTCAGGGGCACC  991

seq1  TTGAAAAGAAGCCACTGCCTGAACTCCTGAGGAATATGCACCTGAAGGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAGAAGCCACTGCCTGAACTCCTGAGGAATATGCACCTGAAGGAG  1041

seq1  TTCTTAGTGTGGCTGTGTTCCGTTCTATTTTGGGATCATTGGAATTC  1096
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGTGTGGCTGTGTTCCGTTCTATTTTGGGATCATTGGAATTC  1088