BAC Information

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BAC

Clone NameB6Ng01-131K20
Chromosome2 (Build37)
Map Location 134,315,859 - 134,458,801
singlet/doubletdoublet
Overlap geneHao1, Txndc13
Upstream geneBmp2
Downstream geneLOC627897, LOC433478, Plcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131K20.bB6Ng01-131K20.g
ACCDH932674DH932675
length1,1551,098
definitionDH932674|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K20, 5' end.DH932675|Mus musculus domesticus DNA, BAC clone: B6Ng01-131K20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,315,859 - 134,317,022)(134,457,686 - 134,458,801)
sequence
gaattctttctctggcccgtatcaagaatgcatatgacacatggatacat
gactgacatgctctagggatgcaaaaattctctcacttagttgaatttct
gttgcttatcaaattcaaattgaggtttactgaagaatcaaaggaatttt
aaacatcagaatctatgttcaagaaagccatactcttttaatattatcat
attatcatttctgtttcttattgtaaatcaagtaatttcacaatagcact
ttgtggtcataaaggctcatttgtactttcagaacaatgtacaaaatcaa
tgttctttcttcaaatgtgctggttttaaagttcctaagttaatgacgat
agaaacttagcatcttaagctatatagtgaaacagtaaaaagcaatgcaa
agaatatgtcaccctaatggtggggcactagcaagaaccccaaagcctgg
gagacagctcctggcccacatttcatcattgcatgaccctggtgttcaga
gagatgtctaggacatgtaagtaacctctgtaaaatcaaagaccaagcac
acaacactgcccctcccaagcttctagcatcctcccagtgaaactgttaa
aatgttcttattagttgaatatcatattagtaactgtcgctgtgagatat
caaatgaccaagataattatttatttcactaaactgtttccatgttgtga
cctgagcctgaatatgaacatttctaagattttgatatctgtaatttttc
ttcccaattcatagaccatggaacactcagccatgatgaatatagaatag
gaaaccatgctgactcttacattggggaagagtactagagctctctggct
tatgttttgattttgatcaacagtcaaaaacttcaagggtcaaagaacat
gagatgtattgaaattaataagataaatatttgaaagtatgaaaatgctt
cttggaattaaagtaataaaattaaattctgaatgatgtcttattccctt
ctcgtgtagctggtacttttactggttttcctttattggacaggtggaaa
tcccagaaagaagcatgaacatccagcatcctaaaaggttgtagcagaag
atggctagtcggtccatatgggaggagaggcccttgggccttgcaagatt
atatg
gaattccatataactgggaggagtgaatggatattccacccctcattctg
tgaggaaacataagtaaggcagcaagcccagctagggtagtaagtattat
gtgaatacagatttattttataaaaatgatgaaaacagattgtcagtgct
tcagtgtatcaaatttcaagtgacccaagagatagaaaattcaaacagat
gatttacatagatgcttgatttttgttggtatcgttcagcaagagaggta
ggtagaaataagtgttagaagaatgtatgttattttctcctgatatgttc
tttctctacactaagtacaggtagccttctaaatataattgatttacaag
ttacatttataggatagagagctgttttgcagccattgtgagtcgagttt
gctgcattttgttgtttgtataatgtctctatcaggccatgattgtgatg
agtgaaaatctttccctctgtgagaacactacctactttcctcatctgag
ttatcttcaggaactaccagggttcctcaaagaagtttcttagtaactat
ttgctgagcgaaggagacctttattctgtttacctttacatatagataat
gacatcatatgtgctttatgtttagtaaagagttacagaaacaatgaaaa
taagtatgattcatgtacaatacttggaaattgtataaatacacaaaatt
atgtaaaataattaggatattaaacctttaaaaatattcattaatggaat
ggaatagtacaagtatcttttacattattttatttttccattttatgagc
tagggcatcactgtagtttttagactagaatgaaacttgatatatagccc
taggcattcctcagatttgtagtgctgggattaccagcctcactgggcct
ggtttacattttaaacttgtttgttgtttgcttgttttttctgagacagg
gatctctatgtaattaaccctgggctgtctggggctcaaaccacagagat
tacttgctcttgcctccagtgctgaaataaggcttgtttacaggcctgga
ctactattttgtttttaagtcctatagttaaaaatattctaaggactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_134315859_134317022
seq2: B6Ng01-131K20.b_44_1198

seq1  GAATTCTTTCTCTGGCCCGTATCAAGAATGCATATGACACATGGATACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCTGGCCCGTATCAAGAATGCATATGACACATGGATACAT  50

seq1  GACTGACATGCTCTAGGGATGCAAAAATTCTCTCACTTAGTTGAATTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGACATGCTCTAGGGATGCAAAAATTCTCTCACTTAGTTGAATTTCT  100

seq1  GTTGCTTATCAAATTCAAATTGAGGTTTACTGAAGAATCAAAGGAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTATCAAATTCAAATTGAGGTTTACTGAAGAATCAAAGGAATTTT  150

seq1  AAACATCAGAATCTATGTTCAAGAAAGCCATACTCTTTTAATATTATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCAGAATCTATGTTCAAGAAAGCCATACTCTTTTAATATTATCAT  200

seq1  ATTATCATTTCTGTTTCTTATTGTAAATCAAGTAATTTCACAATAGCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCATTTCTGTTTCTTATTGTAAATCAAGTAATTTCACAATAGCACT  250

seq1  TTGTGGTCATAAAGGCTCATTTGTACTTTCAGAACAATGTACAAAATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTCATAAAGGCTCATTTGTACTTTCAGAACAATGTACAAAATCAA  300

seq1  TGTTCTTTCTTCAAATGTGCTGGTTTTAAAGTTCCTAAGTTAATGACGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTCTTCAAATGTGCTGGTTTTAAAGTTCCTAAGTTAATGACGAT  350

seq1  AGAAACTTAGCATCTTAAGCTATATAGTGAAACAGTAAAAAGCAATGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTAGCATCTTAAGCTATATAGTGAAACAGTAAAAAGCAATGCAA  400

seq1  AGAATATGTCACCCTAATGGTGGGGCACTAGCAAGAACCCCAAAGCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATGTCACCCTAATGGTGGGGCACTAGCAAGAACCCCAAAGCCTGG  450

seq1  GAGACAGCTCCTGGCCCACATTTCATCATTGCATGACCCTGGTGTTCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGCTCCTGGCCCACATTTCATCATTGCATGACCCTGGTGTTCAGA  500

seq1  GAGATGTCTAGGACATGTAAGTAACCTCTGTAAAATCAAAGACCAAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTCTAGGACATGTAAGTAACCTCTGTAAAATCAAAGACCAAGCAC  550

seq1  ACAACACTGCCCCTCCCAAGCTTCTAGCATCCTCCCAGTGAAACTGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACACTGCCCCTCCCAAGCTTCTAGCATCCTCCCAGTGAAACTGTTAA  600

seq1  AATGTTCTTATTAGTTGAATATCATATTAGTAACTGTCGCTGTGAGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCTTATTAGTTGAATATCATATTAGTAACTGTCGCTGTGAGATAT  650

seq1  CAAATGACCAAGATAATTATTTATTTCACTAAACTGTTTCCATGTTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGACCAAGATAATTATTTATTTCACTAAACTGTTTCCATGTTGTGA  700

seq1  CCTGAGCCTGAATATGAACATTTCTAAGATTTTGATATCTGTAATTTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCCTGAATATGAACATTTCTAAGATTTTGATATCTGTAATTTTTC  750

seq1  TTCCCAATTCATAGACCATGGAACACTCAGCCATGATGAATATAGAATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAATTCATAGACCATGGAACACTCAGCCATGATGAATATAGAATAG  800

seq1  GAAACCATGCTGACTCTTACATTGGGGAAGAGTACTAGAGCTCCCTGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAACCATGCTGACTCTTACATTGGGGAAGAGTACTAGAGCTCTCTGGCT  850

seq1  TATG-TTTGATTTCTGATCAACAGTCAAAAACTTCAAGGGTCAAAAGAAC  899
      |||| |||||||| |||||||||||||||||||||||||||| |||||||
seq2  TATGTTTTGATTT-TGATCAACAGTCAAAAACTTCAAGGGTC-AAAGAAC  898

seq1  ATGAGATGTATTGAAATTAATAAGATAAATTATTTGAAAGTAATGAAAAT  949
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  ATGAGATGTATTGAAATTAATAAGATAAA-TATTTGAAAGT-ATGAAAAT  946

seq1  GCTCTTTGAAATTAAAGTAATAAAATTAAATTCTTGAATGATGTCTTATT  999
      |||  ||| |||||||||||||||||||||||| ||||||||||||||||
seq2  GCTTCTTGGAATTAAAGTAATAAAATTAAATTC-TGAATGATGTCTTATT  995

seq1  CCCTTCTCGTTGTAGCTGGTACTTTTACTGTTTTCCTTTTATTGGACAAG  1049
      ||||||||| |||||||||||||||||||| ||| | |||||||||| ||
seq2  CCCTTCTCG-TGTAGCTGGTACTTTTACTGGTTTTCCTTTATTGGAC-AG  1043

seq1  TTGAAAATCACAGAAAG-AGCATGAACATCCAGCAT-CAAAAAGGCGTAT  1097
       || ||||| ||||||| |||||||||||||||||| | ||||||    |
seq2  GTGGAAATCCCAGAAAGAAGCATGAACATCCAGCATCCTAAAAGG---TT  1090

seq1  GTAGCAGAAGATGGCCTAGTCGG-CCATCATTGGGAGGAGAGGCCCTT-G  1145
      |||||||||||||| |||||||| ||||   ||||||||||||||||| |
seq2  GTAGCAGAAGATGG-CTAGTCGGTCCAT--ATGGGAGGAGAGGCCCTTGG  1137

seq1  GTCTTGCAAAGATTATATG  1164
      | ||||| |||||||||||
seq2  GCCTTGC-AAGATTATATG  1155

seq1: chr2_134457686_134458801
seq2: B6Ng01-131K20.g_70_1167 (reverse)

seq1  GAGTCCCTTAGAATAATTTTTTAAAACTATAAAGAACATTTAAAAACAAA  50
      |||| |||||||||| ||||    ||||||  || ||  |||||||||||
seq2  GAGT-CCTTAGAATATTTTT----AACTAT--AGGAC--TTAAAAACAAA  41

seq1  AATAAGTAGTCCAGGCATGGTAGAACAAGCCTTTAATTCCAGCACTTGGG  100
      |   |||||||||||| | ||| ||||||||||  ||| |||||||  ||
seq2  A--TAGTAGTCCAGGCCT-GTA-AACAAGCCTT--ATTTCAGCACT--GG  83

seq1  AGGCAGAGGCAGGTAATCTCTGTGGGTTTGAGGCCCCAGGACAG-CCAGG  149
      |||||   ||| ||||||||||| ||||||| |||||| ||||| |||||
seq2  AGGCAAGAGCAAGTAATCTCTGT-GGTTTGA-GCCCCA-GACAGCCCAGG  130

seq1  GTTTATTACATAGAGAATCCCTGTCTCAGAAAAAAACAAGCAAACAAACA  199
      ||| ||||||||||| ||||||||||||| ||||||||||||||| ||||
seq2  GTTAATTACATAGAG-ATCCCTGTCTCAG-AAAAAACAAGCAAAC-AACA  177

seq1  AACAAGTTTAAAATGTAAACCAGGCCCAGTGAGGCTGGTAATCCCAGCAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTTAAAATGTAAACCAGGCCCAGTGAGGCTGGTAATCCCAGCAC  227

seq1  TACAAATCTGAGGAATGCCTA-GGCTATATATCAAGTTTCATTCTAGTCT  298
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TACAAATCTGAGGAATGCCTAGGGCTATATATCAAGTTTCATTCTAGTCT  277

seq1  -AAAACTACAGTGATGCCCTAGCTCATAAAATGG-AAAATAAAATAATGT  346
       ||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAAAACTACAGTGATGCCCTAGCTCATAAAATGGAAAAATAAAATAATGT  327

seq1  -AAAGATACTTGTACTATTCCATTCCATTAATGAATATTTTTAAAGGTTT  395
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATACTTGTACTATTCCATTCCATTAATGAATATTTTTAAAGGTTT  377

seq1  AATATCCTAATTATTTTACATAATTTTGTGTATTTATACAATTTCCAAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCCTAATTATTTTACATAATTTTGTGTATTTATACAATTTCCAAGT  427

seq1  ATTGTACATGAATCATACTTATTTTCATTGTTTCTGTAACTCTTTACTAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACATGAATCATACTTATTTTCATTGTTTCTGTAACTCTTTACTAA  477

seq1  ACATAAAGCACATATGATGTCATTATCTATATGTAAAGGTAAACAGAATA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGCACATATGATGTCATTATCTATATGTAAAGGTAAACAGAATA  527

seq1  AAGGTCTCCTTCGCTCAGCAAATAGTTACTAAGAAACTTCTTTGAGGAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCCTTCGCTCAGCAAATAGTTACTAAGAAACTTCTTTGAGGAAC  577

seq1  CCTGGTAGTTCCTGAAGATAACTCAGATGAGGAAAGTAGGTAGTGTTCTC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTAGTTCCTGAAGATAACTCAGATGAGGAAAGTAGGTAGTGTTCTC  627

seq1  ACAGAGGGAAAGATTTTCACTCATCACAATCATGGCCTGATAGAGACATT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGGAAAGATTTTCACTCATCACAATCATGGCCTGATAGAGACATT  677

seq1  ATACAAACAACAAAATGCAGCAAACTCGACTCACAATGGCTGCAAAACAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAACAACAAAATGCAGCAAACTCGACTCACAATGGCTGCAAAACAG  727

seq1  CTCTCTATCCTATAAATGTAACTTGTAAATCAATTATATTTAGAAGGCTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTATCCTATAAATGTAACTTGTAAATCAATTATATTTAGAAGGCTA  777

seq1  CCTGTACTTAGTGTAGAGAAAGAACATATCAGGAGAAAATAACATACATT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTTAGTGTAGAGAAAGAACATATCAGGAGAAAATAACATACATT  827

seq1  CTTCTAACACTTATTTCTACCTACCTCTCTTGCTGAACGATACCAACAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAACACTTATTTCTACCTACCTCTCTTGCTGAACGATACCAACAAA  877

seq1  AATCAAGCATCTATGTAAATCATCTGTTTGAATTTTCTATCTCTTGGGTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGCATCTATGTAAATCATCTGTTTGAATTTTCTATCTCTTGGGTC  927

seq1  ACTTGAAATTTGATACACTGAAGCACTGACAATCTGTTTTCATCATTTTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATTTGATACACTGAAGCACTGACAATCTGTTTTCATCATTTTT  977

seq1  ATAAAATAAATCTGTATTCACATAATACTTACTACCCTAGCTGGGCTTGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAATCTGTATTCACATAATACTTACTACCCTAGCTGGGCTTGC  1027

seq1  TGCCTTACTTATGTTTCCTCACAGAATGAGGGGTGGAATATCCATTCACT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTACTTATGTTTCCTCACAGAATGAGGGGTGGAATATCCATTCACT  1077

seq1  CCTCCCAGTTATATGGAATTC  1116
      |||||||||||||||||||||
seq2  CCTCCCAGTTATATGGAATTC  1098