BAC Information

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BAC

Clone NameB6Ng01-131L20
Chromosome2 (Build37)
Map Location 108,804,300 - 108,804,831
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043078, LOC668790, LOC623003, LOC100043423, LOC623031
Downstream geneMett5d1, Kif18a, Bdnf, LOC100043427, Lin7c, Lgr4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131L20.bB6Ng01-131L20.g
ACCDH932720DH932721
length1,171527
definitionDH932720|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L20, 5' end.DH932721|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgaatagtattccattgtgtaaatgtacc
acattttctgtatccattcctctgttgaggaacatctgggttctttccac
cttctggctattataagtaaggctgctatgaacatagtggattatgtgtc
cttattacatgttggagcatcttctgggtatatacccaggagtagtatag
ctgggtcctcaggtagtactgtgtccaattttcagaggaaccaccaaact
gatttccagagtggttgtaccagcttgcaatcccaccaacaatcgagcaa
tattcctttttctccacatcctcaccagcgtctgctgtcacctgagtttt
gatcttagccattctggctggtgtgaagtgggatctcagggttgttgtga
tttgcatttccctgatgactaaggatgttgtacaattctttaggtgcttc
tcagccatttggtattccttggttgagaattctgagtgcccttgcatttg
gagcatagatgttcagaattgagagttcttcttggtagaatttcctttga
tgagtatgaagtatcttccttatcttttttttgatgacttttggtttaaa
gtcaattttatctgatattagaatggctactcctgcttgtttcttgggac
catttgcttggaaaattgttttctagtcctctactctgaggtagtgtttg
tctttgatactgaggtaaatttcctgtatgcagcaaaatgctggtacttg
tttctgtatccagtctgttagtctatgtctttttattggggaattgagtc
cattgatgttaagagatattcaggaatagtgattgtttctccctgttatt
attgatgttatttttgtttgtgtgggtatcttctattgggtttcttgaaa
gattactttcttgctttttcaagtgtagtttccctccttgtgttggcatt
ttccttctattatcttttgtagactgtatttgtgaaagatattgtgtaaa
ttttgttgtcatgaatatcttggtttctcatcatggtatgagatgttgct
gggatagatttctgtgtgtattcgttctcagacttgatgaattctctagg
attctacttttttatctctgtgagagcctgtcaattctggacgtcgcgat
ttaagttactggaacctcact
tccatggcagctttccagaatgggtaaactaaacctgtggcagaatagag
aggtaaaaatttgtacatggaagagggcaagtaagactctgcagtttctg
caaagacataaacaatctgatgctctgcagtatgtgaggagactcacagc
atggagccatgaaaagaatggggctgggatcaagactagatttagaatgc
aaaatttcacagttcctggagacaggcttccattgcctgttgggagattt
acactaaccccacacatgctatggaaacaagctgaactacactgtggcta
cagtcattgtgcttttctttttttggggggggggtatttatttcatttac
atttccaatgctatcccaaaagccccacacatgctcccccacccactccc
cgacccaccaattcccacttcttggccctgttgttaccctgtactgaggc
atataaagtttgcaagacgaatgggcctctttttccactgatggccaact
aggccattttcttgattcatttgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_108804300_108804831
seq2: B6Ng01-131L20.g_71_603

seq1  GAATTCTCCATGGCAGCTTTCCAGAATGGGTAAACTAAACCTGTGGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGGCAGCTTTCCAGAATGGGTAAACTAAACCTGTGGCAGA  50

seq1  ATAGAGAGGTAAAAATTTGTACATGGAAGAGGGCAAGTAAGACTCTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGAGGTAAAAATTTGTACATGGAAGAGGGCAAGTAAGACTCTGCAG  100

seq1  TTTCTGCAAAGACATAAACAATCTGATGCTCTGCAGTATGTGAGGAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCAAAGACATAAACAATCTGATGCTCTGCAGTATGTGAGGAGACT  150

seq1  CACAGCATGGAGCCATGAAAAGAATGGGGCTGGGATCAAGACTAGATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATGGAGCCATGAAAAGAATGGGGCTGGGATCAAGACTAGATTTA  200

seq1  GAATGCAAAATTTCACAGTTCCTGGAGACAGGCTTCCATTGCCTGTTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCAAAATTTCACAGTTCCTGGAGACAGGCTTCCATTGCCTGTTGGG  250

seq1  AGATTTACACTAACCCCACACATGCTATGGAAACAAGCTGAACTACACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACACTAACCCCACACATGCTATGGAAACAAGCTGAACTACACTG  300

seq1  TGGCTACAGTCATTGTGCTTTTCTTTTTTTGGGGGGGGGGTATTTATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACAGTCATTGTGCTTTTCTTTTTTTGGGGGGGGGGTATTTATTTC  350

seq1  ATTTACATTTCCAATGCTATCCCAAAAGCCCCACACATGCTCCCCCACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACATTTCCAATGCTATCCCAAAAGCCCCACACATGCTCCCCCACCC  400

seq1  ACTCCCCGACCCACCAATTCCCACTTCTTGGCCCTGTTGTTACCCTGTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCGACCCACCAATTCCCACTTCTTGGCCCTGTTGTTACCCTGTAC  450

seq1  TGAGGCATATAAAGTTTGCAAGACGAATGGGCCTCTTTTTCCACTGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCATATAAAGTTTGCAAGACGAATGGGCCTCTTTTTCCACTGATGG  500

seq1  CCAACTAGGCCATTTTC-TGATTCATATGCAGC  532
      ||||||||||||||||| |||||||| ||||||
seq2  CCAACTAGGCCATTTTCTTGATTCATTTGCAGC  533