BAC Information

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BAC

Clone NameB6Ng01-132B10
Chromosome2 (Build37)
Map Location 155,584,801 - 155,686,343
singlet/doubletdoublet
Overlap geneMmp24, Itgb4bp, 5530400B04Rik, 2410003P15Rik
Upstream geneLOC435692, Raly, Eif2s2, a, Ahcy, Itch, LOC100043877, LOC668931, Dynlrb1, Map1lc3a, Cdc91l1, Trp53inp2, Ncoa6, LOC668938, Ggtl3, Acss2, Gss, Myh7b, Trpc4ap, Edem2, Procr
Downstream geneGdf5, Cep250, Ergic3, Fer1l4, Spag4, Cpne1, Rbm12, Nfs1, 2010100O12Rik, Rbm39, Phf20, Scand1, LOC632394, LOC628707, LOC669792, 2900097C17Rik, LOC668941, Epb4.1l1, 0610011L14Rik, Dlgap4, Myl9, LOC433546, Tgif2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132B10.bB6Ng01-132B10.g
ACCDH932981DH932982
length1,087776
definitionDH932981|Mus musculus domesticus DNA, BAC clone: B6Ng01-132B10, 5' end.DH932982|Mus musculus domesticus DNA, BAC clone: B6Ng01-132B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(155,584,801 - 155,585,906)(155,685,568 - 155,686,343)
sequence
gaattccacgaggattctccgtgcctttgcatcatatcagaaacagaagg
caaaggatcagaagcaggggacgagaggaagaaggcttgctccctctctc
cctccagtctccacagagagaagggtgactggaattcaggggacactgct
gagtagtttccatgactgtataactgtgggccagtcagtcactgctgctc
tgtgggaaggagcctgtagtttctgagatatctgcccgctctgatcgtca
ggattctagctcctacctccagatggctgacatttgggtaaatccttaag
ggtctttgacattccatccatcttcagagaataacctcaggatgcttgcc
ttaggtctgacctctcacagccaaaccggaagcccagttggagtttacat
cagaaataaacaaatctgggacacttttaaacaaatgacttttaagagca
tcctaaaaacctccttctgggtggcctggtccataatcctccattttttt
atttatctgagtaccctgcagctgtcttcagacacacactagaaaagtac
attggattatattacagatggttgtgagccaccaggtggttgctgggaat
tgaactcaggacctctagaagagcagtcagtgctcttaaccactgagcca
tctctccagcccccttcctttttcttaaggaacaaggtctcactatgtac
ctcttggcttggcctgtcctttgctctgtagaacatgctggcctcaaact
cagagctccacctgtatttgcgttctgaatgccgggattaaagagaacca
ggacaccagcgtgtatcccatgttcccagtgtattgcgctgttggtgggg
tgtatcttacaataagcaccctgctcacaggtaagggaatgcagaagtgg
atagaacaggacccctgaaacagtcctaatctagagggagagcacacaaa
cagcagagagcaaagtgattatagctgcttccagggaggatctcagaagc
cacacgggcgtggactgcatcggagcttgagaaacacgatttcaatggta
gaaggagcaccatgcttgtctctgttagacagagaag
gaattcagggaacggtgactttgaatggatgatgaactcagggtcaccag
tattgggacattcctcagtctctcaggcagtcagcttttgggtcagccat
tgtgactgtagcacattaaggtatgagttctggtggagattagaggagac
gatggcctgtatgggtgtgggaaggatgattaagcaagacttagtctcca
cacgaggttctgaaggatgtttggcagtttcttgaacctgtcaagctaag
taacagtctgtagcccatgttgtatggtgatggactttgtcctgtatccc
agagaagagcagcaccatggcccttgcccccagtggacgaccacgtggtg
cccaagttttaacccttgatgtttggtgaagtgccgcagactgcaggtgt
ctgatgagtttaatcggcatctcatgagtctcacggggaattatgtttct
acagcaatccctttgtggtaccagcagctctgtgtccccactcctgcagc
ctcccaggctccttgttcctcacagacatccccttgtcttgcctttcacc
aaaagctcttctaagcagcccttgagatgttccctaacataggagggcag
tgttcccgcctattcgtctgtctggtgcccccaatattccatccctcacc
tctgcacatcttgttcctctgttggaagggcctcctctccagtctctccc
tgtcctggcagactcctttcccaagtccacttaaggatgttttaaagtgt
gtgtgtgtgtgtgtgtgtgtgtgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_155584801_155585906
seq2: B6Ng01-132B10.b_48_1134

seq1  GAATTCCACGAGGATTCTCCGTGCCTTTGCATCATATCAGAAACAGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGAGGATTCTCCGTGCCTTTGCATCATATCAGAAACAGAAGG  50

seq1  CAAAGGATCAGAAGCAGGGGACGAGAGGAAGAAGGCTTGCTCCCTCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGATCAGAAGCAGGGGACGAGAGGAAGAAGGCTTGCTCCCTCTCTC  100

seq1  CCTCCAGTCTCCACAGAGAGAAGGGTGACTGGAATTCAGGGGACACTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGTCTCCACAGAGAGAAGGGTGACTGGAATTCAGGGGACACTGCT  150

seq1  GAGTAGTTTCCATGACTGTATAACTGTGGGCCAGTCAGTCACTGCTGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGTTTCCATGACTGTATAACTGTGGGCCAGTCAGTCACTGCTGCTC  200

seq1  TGTGGGAAGGAGCCTGTAGTTTCTGAGATATCTGCCCGCTCTGATCGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAAGGAGCCTGTAGTTTCTGAGATATCTGCCCGCTCTGATCGTCA  250

seq1  GGATTCTAGCTCCTACCTCCAGATGGCTGACATTTGGGTAAATCCTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTAGCTCCTACCTCCAGATGGCTGACATTTGGGTAAATCCTTAAG  300

seq1  GGTCTTTGACATTCCATCCATCTTCAGAGAATAACCTCAGGATGCTTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTGACATTCCATCCATCTTCAGAGAATAACCTCAGGATGCTTGCC  350

seq1  TTAGGTCTGACCTCTCACAGCCAAACCGGAAGCCCAGTTGGAGTTTACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTCTGACCTCTCACAGCCAAACCGGAAGCCCAGTTGGAGTTTACAT  400

seq1  CAGAAATAAACAAATCTGGGACACTTTTAAACAAATGACTTTTAAGAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATAAACAAATCTGGGACACTTTTAAACAAATGACTTTTAAGAGCA  450

seq1  TCCTAAAAACCTCCTTCTGGGTGGCCTGGTCCATAATCCTCCATTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAAACCTCCTTCTGGGTGGCCTGGTCCATAATCCTCCATTTTTTT  500

seq1  ATTTATCTGAGTACCCTGCAGCTGTCTTCAGACACACACTAGAAAAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTGAGTACCCTGCAGCTGTCTTCAGACACACACTAGAAAAGTAC  550

seq1  ATTGGATTATATTACAGATGGTTGTGAGCCACCAGGTGGTTGCTGGGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATTATATTACAGATGGTTGTGAGCCACCAGGTGGTTGCTGGGAAT  600

seq1  TGAACTCAGGACCTCTAGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAGGACCTCTAGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCA  650

seq1  TCTCTCCAGCCCCCTTCCTTTTTCTTAAGGAACAAGGTCTCACTATGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGCCCCCTTCCTTTTTCTTAAGGAACAAGGTCTCACTATGTAC  700

seq1  CTC-TGGCTTGGCCTGTCCTTTGCTCTGTAGAACATGCTGGCCTCAAACT  749
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGCTTGGCCTGTCCTTTGCTCTGTAGAACATGCTGGCCTCAAACT  750

seq1  CAGAGCTCCACCTGTATTTGCGTTCTGAATGCCGGGATTAAAGAGAACCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCTCCACCTGTATTTGCGTTCTGAATGCCGGGATTAAAGAGAACCA  800

seq1  GGACACCAGCGTGTATCCCATGTTCCCAGTGTATTGCGCTGTTGGTGGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCAGCGTGTATCCCATGTTCCCAGTGTATTGCGCTGTTGGTGGGG  850

seq1  TGTATCTTACAATAAGCACCCTGCTCACAGGTAAAGGGAAGGCAGAAGTG  899
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  TGTATCTTACAATAAGCACCCTGCTCACAGGT-AAGGGAATGCAGAAGTG  899

seq1  GATAGAACAGGACCCCCTGGAAACAGTCCTAATCTAGAGGGAGAAGCACA  949
      ||||||||||||||||   |||||||||||||||||||||||| ||||||
seq2  GATAGAACAGGACCCC--TGAAACAGTCCTAATCTAGAGGGAG-AGCACA  946

seq1  CAAAACAGCAGAGAGCAAAAGTGATTATAGCTGCCTTCCCAGGGAGGAAT  999
      | |||||||||||||| |||||||||||||||||  | ||||||||| ||
seq2  C-AAACAGCAGAGAGC-AAAGTGATTATAGCTGC--TTCCAGGGAGG-AT  991

seq1  CTCAGGAAGCCACACGGGCCGTGGACTGCATCGGAGCTTGAAGAAACACG  1049
      |||| ||||||||||||| ||||||||||||||||||||| |||||||||
seq2  CTCA-GAAGCCACACGGG-CGTGGACTGCATCGGAGCTTG-AGAAACACG  1038

seq1  ATTTCCACAGGGGAAGAAGGAGCATCCATTGCTTGTCTCTGTCTAGAACA  1099
      ||||   ||  || |||||||||| ||| ||||||||||||| ||||   
seq2  ATTT---CAATGGTAGAAGGAGCA-CCA-TGCTTGTCTCTGT-TAGA--C  1080

seq1  AGAGAAG  1106
      |||||||
seq2  AGAGAAG  1087

seq1: chr2_155685568_155686343
seq2: B6Ng01-132B10.g_66_840 (reverse)

seq1  CACACACACACACACACACACACACACACTTTAAAACATCCTTAAGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACTTTAAAACATCCTTAAGTGGA  50

seq1  CTTGGGGAAAGGAGTCTGCCAGGACAGGGAGAGACTGGAGAGGAGGCCCT  100
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTT-GGGAAAGGAGTCTGCCAGGACAGGGAGAGACTGGAGAGGAGGCCCT  99

seq1  TCCAACAGAGGAACAAGATGTGCAGAGGTGAGGGATGGAATATTGGGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAGAGGAACAAGATGTGCAGAGGTGAGGGATGGAATATTGGGGGC  149

seq1  ACCAGACAGACGAATAGGCGGGAACACTGCCCTCCTATGTTAGGGAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACAGACGAATAGGCGGGAACACTGCCCTCCTATGTTAGGGAACAT  199

seq1  CTCAAGGGCTGCTTAGAAGAGCTTTTGGTGAAAGGCAAGACAAGGGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGGCTGCTTAGAAGAGCTTTTGGTGAAAGGCAAGACAAGGGGATG  249

seq1  TCTGTGAGGAACAAGGAGCCTGGGAGGCTGCAGGAGTGGGGACACAGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGGAACAAGGAGCCTGGGAGGCTGCAGGAGTGGGGACACAGAGC  299

seq1  TGCTGGTACCACAAAGGGATTGCTGTAGAAACATAATTCCCCGTGAGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTACCACAAAGGGATTGCTGTAGAAACATAATTCCCCGTGAGACT  349

seq1  CATGAGATGCCGATTAAACTCATCAGACACCTGCAGTCTGCGGCACTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATGCCGATTAAACTCATCAGACACCTGCAGTCTGCGGCACTTCA  399

seq1  CCAAACATCAAGGGTTAAAACTTGGGCACCACGTGGTCGTCCACTGGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACATCAAGGGTTAAAACTTGGGCACCACGTGGTCGTCCACTGGGGG  449

seq1  CAAGGGCCATGGTGCTGCTCTTCTCTGGGATACAGGACAAAGTCCATCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCCATGGTGCTGCTCTTCTCTGGGATACAGGACAAAGTCCATCAC  499

seq1  CATACAACATGGGCTACAGACTGTTACTTAGCTTGACAGGTTCAAGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAACATGGGCTACAGACTGTTACTTAGCTTGACAGGTTCAAGAAAC  549

seq1  TGCCAAACATCCTTCAGAACCTCGTGTGGAGACTAAGTCTTGCTTAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAACATCCTTCAGAACCTCGTGTGGAGACTAAGTCTTGCTTAATCA  599

seq1  TCCTTCCCACACCCATACAGGCCATCGTCTCCTCTAATCTCCACCAGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCACACCCATACAGGCCATCGTCTCCTCTAATCTCCACCAGAAC  649

seq1  TCATACCTTAATGTGCTACAGTCACAATGGCTGACCCAAAAGCTGACTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTTAATGTGCTACAGTCACAATGGCTGACCCAAAAGCTGACTGC  699

seq1  CTGAGAGACTGAGGAATGTCCCAATACTGGTGACCCTGAGTTCATCATCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGACTGAGGAATGTCCCAATACTGGTGACCCTGAGTTCATCATCC  749

seq1  ATTCAAAGTCACCGTTCCCTGAATTC  776
      ||||||||||||||||||||||||||
seq2  ATTCAAAGTCACCGTTCCCTGAATTC  775