BAC Information

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BAC

Clone NameB6Ng01-132F18
Chromosome2 (Build37)
Map Location 59,596,889 - 59,714,031
singlet/doubletdoublet
Overlap geneTanc1, Wdsub1
Upstream geneUpp2, BC062650, Pkp4, LOC625354, 2310032F03Rik, LOC100038999, LOC100039016
Downstream geneBaz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1, Itgb6, Rbms1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132F18.bB6Ng01-132F18.g
ACCDH933180DH933181
length1,165980
definitionDH933180|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F18, 5' end.DH933181|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,712,861 - 59,714,031)(59,596,889 - 59,597,878)
sequence
gaattcctgattaaactcttggttttcagtagagacattggatagggcgg
ttaggcttgttcattttcactgcctttgttagaggagagactctgcctct
gccctctctagtcttgtcatcagatctgaggtatctgtagcaacagagga
gccacaagagtaaattacttaccctggtggatgtcagttgaatgataata
gttacaaattaactaacccccccctcacccataggaagcctttcaaatct
ggtatgtgtatcatagggttcagtcccctcatgctgctagctgtgatgct
agaggcagccctggcacagcaagaagacagagtggcttccacagtcccct
tattccagagccctcagtgattcaagtagaatgaaggtcaaatttcaaat
cccaaacacaatacatcagtatccgtctagcatgtcgaacctaaccctga
ttggagtggggaaactcagtcccggctttacactgtctcgccacgcagtt
tttccatctcttgtattgaatttgtttttcaagctatctccctctgagcc
ctttacctagtggacactagagcttgccagtcaagattgcttgattagat
gaaatcttttcttttttaaccttttaacattttatttatgtttaataggt
tttattttaacgaacccattcttccattaaagtctctgcctgattgagct
aaacatttttgatgattgttttgtgctatttattcccaggatggcttata
acagacaggaaccatttcacccaattttgtggtaccttctccacatcttt
aaggcatgcacttgttgaaaaagaacattgcaaagagacacactaactag
gcaaggaacttttcacttttgccaaagggtctgcagtgacgtaagccagg
agagcaagcacctccggggtgggacgacccttgtacctccaggagggtgt
gcgtgcatgtgaagcaccgtgtaaaatggcgactgttgctgtcaggcagc
agctgtggaagagcttccaccgacttctggagatgccaactttgatttgt
taattttgctaactgtgtaaattttccagcgatcagctggattgaatagg
acttaatttatgtaattccaggtttctcttggtcaagtcaatgtaatcca
tattattattctgtg
gaattctgacctcgctgggtttgggagacatgcaatgccagccagttgac
cttggttttttgttttgtttttgttttatacaaacacattacccctccag
aatagttaagagcaggctttggctgagaatcggagactttcactagacaa
actcacttaagagcacatggtgactttggaaagctttttaaaagttaaac
atctgtgatttttctatagagggagctttggattagggacaaagaaaaga
aaatccaaactgattgaagcctcttttctttttgccataaaagtcaatgc
atcacaccccacacacttctaagtcaaagtatacgtataacatatgttaa
tgcttgtggcgttcaatagatgcattaatagtttgcgtttgttgtttatt
tgttgagacagagtttctctgtatagctttggctgttctggaattcactc
tgtagaccaggctggctttgaactcatagagatccgcttgcctctgcctc
ccacgtgctgggatcaaatgtgtgcatcgccgccaccacctggctaggtt
ttgctatttttttaatcagccccaagactttgtttgttcttgtctgggat
ttgattggtccacagaatgttctaaacccgcagtgtgtttccctgcacaa
acatgagagtaaaactcttagcctgtaaaagcttgttttttcctccgggt
aagcataagcgtctaattacttccaacactgtaagacactcatccatgga
aagagcactcagtcagatttccactgtagaatgcctatggccggctccct
tctgcctcccccatggtggggatggagaaccccttcctttataaccactg
tgtgcattctgtgtctgctgaggcacaggaagaagtagggtaggctggat
agtggggtgtataatgcttactgaaatgactgaatgcaaagctggatggt
aaacggagatggtttggatgcattggactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_59712861_59714031
seq2: B6Ng01-132F18.b_48_1212 (reverse)

seq1  CACAGAATAATAATAATTGATTTTCCATTTGATTTGACCAAGAGGAAAAC  50
      |||||||||||||| || ||  || || |||| |||||||||| |||| |
seq2  CACAGAATAATAAT-ATGGA--TTACA-TTGACTTGACCAAGA-GAAACC  45

seq1  TTGAATTACATAAATGTAAAGTCCTA-TCAATCCAGCTGATCTGCTGGAA  99
      | ||||||||||||  | |||||||| ||||||||||||||| |||||||
seq2  TGGAATTACATAAA--TTAAGTCCTATTCAATCCAGCTGATC-GCTGGAA  92

seq1  AATATTACACAGTTTAGCAAAATTAACCAAATC-AAGTTGGCATCT-CAG  147
      ||| |||||||| ||||||||||||| |||||| |||||||||||| |||
seq2  AAT-TTACACAG-TTAGCAAAATTAA-CAAATCAAAGTTGGCATCTCCAG  139

seq1  AAGTCGGTGGAAGCTCTTCCACAGCTGCTGCCTGACAGC-ACAGTCGCCA  196
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGTCGGTGGAAGCTCTTCCACAGCTGCTGCCTGACAGCAACAGTCGCCA  189

seq1  TTTTACACGGTGGCTTCACATGCACGCACACCCTCCTGGAGGTAC-AGGG  245
      ||||||||||| ||||||||||||||||||||||||||||||||| ||||
seq2  TTTTACACGGT-GCTTCACATGCACGCACACCCTCCTGGAGGTACAAGGG  238

seq1  TCGTCCCA-CCCGGAGGTGCTTGCTCTCCTGGCTTACGTCACTGCAGACC  294
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCCACCCCGGAGGTGCTTGCTCTCCTGGCTTACGTCACTGCAGACC  288

seq1  CTTTGGCAAAAGTGAAAAGTTCCTTGCCTAGTTAGTGTGTCTCTTTGCAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCAAAAGTGAAAAGTTCCTTGCCTAGTTAGTGTGTCTCTTTGCAA  338

seq1  TGTTCTTTTTCAACAAGTGCATGCCTTAAAGATGTGGAGAAGGTACCACA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTTTCAACAAGTGCATGCCTTAAAGATGTGGAGAAGGTACCACA  388

seq1  AAATTGGGTGAAATGGTTCCTGTCTGTTATAAGCCATCCTGGGAATAAAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGGTGAAATGGTTCCTGTCTGTTATAAGCCATCCTGGGAATAAAT  438

seq1  AGCACAAAACAATCATCAAAAATGTTTAGCTCAATCAGGCAGAGACTTTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAAACAATCATCAAAAATGTTTAGCTCAATCAGGCAGAGACTTTA  488

seq1  ATGGAAGAATGGGTTCGTTAAAATAAAACCTATTAAACATAAATAAAATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGAATGGGTTCGTTAAAATAAAACCTATTAAACATAAATAAAATG  538

seq1  TTAAAAGGTTAAAAAAGAAAAGATTTCATCTAATCAAGCAATCTTGACTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGTTAAAAAAGAAAAGATTTCATCTAATCAAGCAATCTTGACTG  588

seq1  GCAAGCTCTAGTGTCCACTAGGTAAAGGGCTCAGAGGGAGATAGCTTGAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTCTAGTGTCCACTAGGTAAAGGGCTCAGAGGGAGATAGCTTGAA  638

seq1  AAACAAATTCAATACAAGAGATGGAAAAACTGCGTGGCGAGACAGTGTAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATTCAATACAAGAGATGGAAAAACTGCGTGGCGAGACAGTGTAA  688

seq1  AGCCGGGACTGAGTTTCCCCACTCCAATCAGGGTTAGGTTCGACATGCTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGGACTGAGTTTCCCCACTCCAATCAGGGTTAGGTTCGACATGCTA  738

seq1  GACGGATACTGATGTATTGTGTTTGGGATTTGAAATTTGACCTTCATTCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGATACTGATGTATTGTGTTTGGGATTTGAAATTTGACCTTCATTCT  788

seq1  ACTTGAATCACTGAGGGCTCTGGAATAAGGGGACTGTGGAAGCCACTCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAATCACTGAGGGCTCTGGAATAAGGGGACTGTGGAAGCCACTCTG  838

seq1  TCTTCTTGCTGTGCCAGGGCTGCCTCTAGCATCACAGCTAGCAGCATGAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGCTGTGCCAGGGCTGCCTCTAGCATCACAGCTAGCAGCATGAG  888

seq1  GGGACTGAACCCTATGATACACATACCAGATTTGAAAGGCTTCCTATGGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGAACCCTATGATACACATACCAGATTTGAAAGGCTTCCTATGGG  938

seq1  TGAGGGGGGGGTTAGTTAATTTGTAACTATTATCATTCAACTGACATCCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGGGGGTTAGTTAATTTGTAACTATTATCATTCAACTGACATCCA  988

seq1  CCAGGGTAAGTAATTTACTCTTGTGGCTCCTCTGTTGCTACAGATACCTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTAAGTAATTTACTCTTGTGGCTCCTCTGTTGCTACAGATACCTC  1038

seq1  AGATCTGATGACAAGACTAGAGAGGGCAGAGGCAGAGTCTCTCCTCTAAC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGATGACAAGACTAGAGAGGGCAGAGGCAGAGTCTCTCCTCTAAC  1088

seq1  AAAGGCAGTGAAAATGAACAAGCCTAACCGCCCTATCCAATGTCTCTACT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGTGAAAATGAACAAGCCTAACCGCCCTATCCAATGTCTCTACT  1138

seq1  GAAAACCAAGAGTTTAATCAGGAATTC  1171
      |||||||||||||||||||||||||||
seq2  GAAAACCAAGAGTTTAATCAGGAATTC  1165

seq1: chr2_59596889_59597878
seq2: B6Ng01-132F18.g_66_1045

seq1  GAATTCTGACCTCGCTGGGTTTGGGAGACATGCAATGCCAGCCAGTTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACCTCGCTGGGTTTGGGAGACATGCAATGCCAGCCAGTTGAC  50

seq1  CTTGGTTTTTTGTTTTGTTTTTGTTTTATACAAACACATTACCCCTCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTTTTTGTTTTGTTTTTGTTTTATACAAACACATTACCCCTCCAG  100

seq1  AATAGTTAAGAGCAGGCTTTGGCTGAGAATCGGAGACTTTCACTAGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTAAGAGCAGGCTTTGGCTGAGAATCGGAGACTTTCACTAGACAA  150

seq1  ACTCACTTAAGAGCACATGGTGACTTTGGAAAGCTTTTTAAAAGTTAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTAAGAGCACATGGTGACTTTGGAAAGCTTTTTAAAAGTTAAAC  200

seq1  ATCTGTGATTTTTCTATAGAGGGAGCTTTGGATTAGGGACAAAGAAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGATTTTTCTATAGAGGGAGCTTTGGATTAGGGACAAAGAAAAGA  250

seq1  AAATCCAAACTGATTGAAGCCTCTTTTCTTTTTGCCATAAAAGTCAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCAAACTGATTGAAGCCTCTTTTCTTTTTGCCATAAAAGTCAATGC  300

seq1  ATCACACCCCACACACTTCTAAGTCAAAGTATACGTATAACATATGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACCCCACACACTTCTAAGTCAAAGTATACGTATAACATATGTTAA  350

seq1  TGCTTGTGGCGTTCAATAGATGCATTAATAGTTTGCGTTTGTTGTTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTGGCGTTCAATAGATGCATTAATAGTTTGCGTTTGTTGTTTATT  400

seq1  TGTTGAGACAGAGTTTCTCTGTATAGCTTTGGCTGTTCTGGAATTCACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGACAGAGTTTCTCTGTATAGCTTTGGCTGTTCTGGAATTCACTC  450

seq1  TGTAGACCAGGCTGGCTTTGAACTCATAGAGATCCGCTTGCCTCTGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCAGGCTGGCTTTGAACTCATAGAGATCCGCTTGCCTCTGCCTC  500

seq1  CCACGTGCTGGGATCAAATGTGTGCATCGCCGCCACCACCTGGCTAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTGCTGGGATCAAATGTGTGCATCGCCGCCACCACCTGGCTAGGTT  550

seq1  TTGCTATTTTTTTAATCAGCCCCAAGACTTTGTTTGTTCTTGTCTGGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTTTTTTAATCAGCCCCAAGACTTTGTTTGTTCTTGTCTGGGAT  600

seq1  TTGATTGGTCCACAGAATGTTCTAAACCCGCAGTGTGTTTCCCTGCACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGGTCCACAGAATGTTCTAAACCCGCAGTGTGTTTCCCTGCACAA  650

seq1  ACATGAGAGTAAAACTCTTAGCCTGTAAAAGCTTGTTTTTTCCTCCGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGAGTAAAACTCTTAGCCTGTAAAAGCTTGTTTTTTCCTCCGGGT  700

seq1  AAGCATAAGCGTCTAATTACTTCCAACACTGTAAGACACTCATCCATGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAAGCGTCTAATTACTTCCAACACTGTAAGACACTCATCCATGGA  750

seq1  AAGAGCACTCAGTCAGATTTCCACTGTAGAATGCCTATGGCCGGCTCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACTCAGTCAGATTTCCACTGTAGAATGCCTATGGCCGGCTCCCT  800

seq1  TCTGCCTCCCCCATGGTGGGGATGGAGAACCCCTTCCTTTCATAACCACT  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TCTGCCTCCCCCATGGTGGGGATGGAGAACCCCTTCCTTT-ATAACCACT  849

seq1  GTGTGCATTCTGTGTCTGCTGAGGCACAGGAAGAAGTAGGGTAGGCTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCATTCTGTGTCTGCTGAGGCACAGGAAGAAGTAGGGTAGGCTGGA  899

seq1  TAGTGGGGTGTATAATGCTAACTGAAAATGAACTGAAATGCAAAAGCTGG  950
      ||||||||||||||||||| |||| ||||| |||| ||||| |||||| |
seq2  TAGTGGGGTGTATAATGCTTACTG-AAATG-ACTG-AATGC-AAAGCT-G  944

seq1  GATGGGTAAACGGGAGATGGTTTTGGGATGCACTGGACTG  990
      ||| ||||||| |||||||||||  ||||||| |||||||
seq2  GAT-GGTAAAC-GGAGATGGTTT--GGATGCATTGGACTG  980