BAC Information

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BAC

Clone NameB6Ng01-132J18
Chromosome2 (Build37)
Map Location 89,164,718 - 89,165,897
singlet/doubletsinglet
Overlap geneOlfr1232
Upstream geneOlfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1, Olfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231
Downstream geneOlfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924, Olfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132J18.bB6Ng01-132J18.g
ACCDH933369DH933370
length1,161951
definitionDH933369|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J18, 5' end.DH933370|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttgtgctatttttcttagaagatactcctagacaaacactta
tgcgtcctatctgtatccttccccaggcttattggcataaagtggcactt
aacccaagaagaaaatgggtaggtcagaatgggtcaaccaattgttaact
atcaagatataaagaagtgattcagattttatagcaaactgcaaaggact
ccaataaaataatggaataacactagacagaaaccaatggtagttttctt
aagatttttcttctgttaatcctaaactctggcagtcactgaagccaata
tcataactgatatttcattctctttatataggttaacaaattttcataca
aatacctttgatataatgaatttctttcagaatatttgaaataatgaaat
taatagccaaatgcaattgaaaatttggattatattctttttattaatag
attctaaggaaacgtagaattcaattcttttaaatttacacctataatta
tttccaactgaaaggacatgcccactataaaagaaaaagcaatattttct
aacccccaaaatgatgcctcttcttgagaactgcattaactcattatagg
caataatacactatttttttgtctgcaacaattttgattccctttactct
ttatataaattttgataaaatgtaacttccatttatctttcatctgaaac
cattaccaatttcttccacaatttccttatggcatttttcatgtccttat
tcctaaaagtgtaaatgataggattaagcaagggggatagcatggtgtaa
aataatgctaccattttgtcaaaggagaaagcactgtgaggccttgcata
tataaatatacatgggacaaagaacaagaccacaacagcaacgtgggacc
cacaagtagacagagctttccatcgcccttcagaactctgggatctcaaa
gacagcaagataaagccataggagacagcaacaaacaagactataataca
gatcaaccactgttggccatcacaaaaagccaaagatgtgagtgtcgtgc
agcaagcttcagtaatggaaataagtcgcacatgaaatgattaatgacat
gggtccacaaatgtactgcaaggagaaaattgccagagaattaacaatcc
tctgtccaggc
gaattccaagctgggtgtctcattcactcagtctccttcttcattttttt
gtccctgcagttctgggtcagtgtttttgactatgagatggcaatcccat
ccctcaatttgatgccctgtctttttatttagtggaggtgaactcttcga
gttccctctccccactattggattttcatctaaggtgtttcacctcccag
gtctcttttactttctagagagttctccaactcccatttccattcattct
gctaactatcaagacgtcccttctgtttaccctctaatacctaatcatat
gccccttttccccttcaccttcctatctccccacccaacccagtcccttc
ctccctctgcctctagtaattgcattcttctctctcctaagtgggattga
agcatcctcacttgggtgcttctgtttcttaacttccttgagttctgtgg
attgtatcctgggtattgtgtagctttttggctaatgtccacttattagt
gagtacatagtatgcatgtcctttggggtctgagttacctcactcaggat
gatattttctacttccatccattttgcctgcaaaactcatgaggtccttg
tttctttaatagatgaatagtatttcattttgtaaatgaatcacattttc
tgtatccatttatcagaggacatgtttgttgctttttagctttttgacta
ttagcatagtggatcacatgtctctatggtattggtggggcatctttttt
ggtatatgcccaagagtgatgtagctggggtctttaggtagatctatttc
ttatttttctgaggaacctccagatttgatttccagagtgcctgtaccag
ttttgtacttcccaccagcaatggaggagtgttcctctttctacacatcc
ttgctagcatgtgctgtcacctgagttttgacctagccttctgattggtc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89164718_89165897
seq2: B6Ng01-132J18.b_49_1209

seq1  GAATTCTTTTGTGCTATTTTTCTTAGAAGATACTCCTAGACAAACACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGTGCTATTTTTCTTAGAAGATACTCCTAGACAAACACTTA  50

seq1  TGCGTCCTATCTGTATCCTTCCCCAGGCTTATTGGCATAAAGTGGCACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTCCTATCTGTATCCTTCCCCAGGCTTATTGGCATAAAGTGGCACTT  100

seq1  AACCCAAGAAGAAAATGGGTAGGTCAGAATGGGTCAACCAATTGTTAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGAAGAAAATGGGTAGGTCAGAATGGGTCAACCAATTGTTAACT  150

seq1  ATCAAGATATAAAGAAGTGATTCAGATTTTATAGCAAACTGCAAAGGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGATATAAAGAAGTGATTCAGATTTTATAGCAAACTGCAAAGGACT  200

seq1  CCAATAAAATAATGGAATAACACTAGACAGAAACCAATGGTAGTTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAAAATAATGGAATAACACTAGACAGAAACCAATGGTAGTTTTCTT  250

seq1  AAGATTTTTCTTCTGTTAATCCTAAACTCTGGCAGTCACTGAAGCCAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTTCTTCTGTTAATCCTAAACTCTGGCAGTCACTGAAGCCAATA  300

seq1  TCATAACTGATATTTCATTCTCTTTATATAGGTTAACAAATTTTCATACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAACTGATATTTCATTCTCTTTATATAGGTTAACAAATTTTCATACA  350

seq1  AATACCTTTGATATAATGAATTTCTTTCAGAATATTTGAAATAATGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTTTGATATAATGAATTTCTTTCAGAATATTTGAAATAATGAAAT  400

seq1  TAATAGCCAAATGCAATTGAAAATTTGGATTATATTCTTTTTATTAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCCAAATGCAATTGAAAATTTGGATTATATTCTTTTTATTAATAG  450

seq1  ATTCTAAGGAAACGTAGAATTCAATTCTTTTAAATTTACACCTATAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAGGAAACGTAGAATTCAATTCTTTTAAATTTACACCTATAATTA  500

seq1  TTTCCAACTGAAAGGACATGCCCACTATAAAAGAAAAAGCAATATTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAACTGAAAGGACATGCCCACTATAAAAGAAAAAGCAATATTTTCT  550

seq1  AACCCCCAAAATGATGCCTCTTCTTGAGAACTGCATTAACTCATTATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCAAAATGATGCCTCTTCTTGAGAACTGCATTAACTCATTATAGG  600

seq1  CAATAATACACTATTTTTTTGTCTGCAACAATTTTGATTCCCTTTACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATACACTATTTTTTTGTCTGCAACAATTTTGATTCCCTTTACTCT  650

seq1  TTATATAAATTTTGATAAAATGTAACTTCCATTTATCTTTCATCTGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAAATTTTGATAAAATGTAACTTCCATTTATCTTTCATCTGAAAC  700

seq1  CATTACCAATTTCTTCCACAATTTCCTTATGGCATTTTTCATGTCCTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCAATTTCTTCCACAATTTCCTTATGGCATTTTTCATGTCCTTAT  750

seq1  TCCTAAAAGTGTAAATGATAGGATTAAGCAAGGGGGATAGCATGGTGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAAGTGTAAATGATAGGATTAAGCAAGGGGGATAGCATGGTGTAA  800

seq1  AATAATGCTACCATTTTGTCAAAGGAGAAAGCACTGTGAGGCCTTGCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGCTACCATTTTGTCAAAGGAGAAAGCACTGTGAGGCCTTGCATA  850

seq1  TATAAATATACATGGGACAAAGAACAAGACCACAACAGCAACGTGGGACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATATACATGGGACAAAGAACAAGACCACAACAGCAACGTGGGACC  900

seq1  CACAAGTAGACAGAGCTTTCCATCGCCCTTCAGAACTCTGGGATCTCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTAGACAGAGCTTTCCATCGCCCTTCAGAACTCTGGGATCTCAAA  950

seq1  GACAGCAAGATAAAGCCATAGGAGACAAGCAACAAAACAAAGACTATAAT  1000
      |||||||||||||||||||||||||| |||||||||   |||||||||||
seq2  GACAGCAAGATAAAGCCATAGGAGAC-AGCAACAAA--CAAGACTATAAT  997

seq1  ACAGATCAACCCACTGTTGGCCACCACAAAAAGGCCAAAGATGTGAGTGT  1050
      ||||||||| ||||||||||||| |||||||| |||||||||||||||||
seq2  ACAGATCAA-CCACTGTTGGCCATCACAAAAA-GCCAAAGATGTGAGTGT  1045

seq1  CGGTGCAGGCAAGCTCCAGTAATGGAAATAAGTCGCACATGAAATGATTA  1100
      | ||||| ||||||| ||||||||||||||||||||||||||||||||||
seq2  C-GTGCA-GCAAGCTTCAGTAATGGAAATAAGTCGCACATGAAATGATTA  1093

seq1  ATGACATTGGGTCCACAAAATGGTAACTGCAAAGTGAAGATAATTTGCAC  1150
      |||||| ||||||||| |||||   ||||||| | ||    || |||| |
seq2  ATGACA-TGGGTCCAC-AAATG--TACTGCAAGGAGA----AAATTGC-C  1134

seq1  AGTAGAATGTAACAATCCTCCTGCCCAGGC  1180
      || ||||| |||||||||| ||| ||||||
seq2  AG-AGAAT-TAACAATCCT-CTGTCCAGGC  1161