BAC Information

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BAC

Clone NameB6Ng01-132L13
Chromosome3 (Build37)2 (Build37)
Map Location 41,059,226 - 41,059,73762,148,461 - 62,148,596
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2
Downstream geneEG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132L13.bB6Ng01-132L13.g
ACCDH933451DH933452
length995136
definitionDH933451|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L13, 5' end.DH933452|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(41,059,226 - 41,059,737)(62,148,461 - 62,148,596)
sequence
gaattctttgttcagctctgagccccattttttaaattgtgttatttgat
tttctggagtccaccttcttgagttctttatatatgttggatatatatct
atcccctatctgatttaggataggtaaagatctttcccaatctgttggtg
gtctttttgtcttattgatgacggtgtcttttgccttgcagaagctttgc
aactttatgaggtcccattctcgatcttacatcacaagccattgctgttc
tattcaggaattttccccctgtacccatatctttgaggcttttccctact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttaat
ccacttagatttgaccttagtacaaggatataggaatgaatcaatttcca
ttcttctacatgataactgccacttgtgccaccaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttttcaaagatcaagtg
accataggtgtgtcggttcatctctgggtcttcaattctgttccattggt
ctacttgtctgttgctataccagtaccatgcagtttttatcacaattgct
ctgtagtacagctttaggtcaggcatggtgattcccccagaggttctttt
atccttgagaagagtttttgctattctaggttttttgctaatcagatgaa
tctgctgattgccgtttctaattcattgaagaattgagttggaatattga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
actatattgatcctgtcaatccatgagaatgggagatctttccatcttct
gagatcttctttaatttctttcttcagagacttgaaattcttatcataca
gatctttcacttccttagttagagtcacgccaatgtatttattttatttg
tgactattgagaagtgctatttccctatttctttctcagcctgtt
actcaatttgcacgcgtcaattgagttgcataatgttctaggcacatctc
aaagaagattaatagacactactagcagtgggtgggtaggtgggggggca
ccctcatagaggcagggaggagggaggaggggatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41059226_41059737
seq2: B6Ng01-132L13.b_50_561 (reverse)

seq1  ACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGT  50
      |||||||||||||||||||||||| || ||||||||||||||||||||||
seq2  ACACACCTATGGTCACTTGATCTTTGAAAAGGGAGCTAAAACCATCCAGT  50

seq1  GGAAAAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTTGTTA  100
      ||||||||||||||||||||||||||||||| |||||||| |||  ||||
seq2  GGAAAAAAGACAGCATTTTCAACAAATGGTGGTGGCACAAGTGGCAGTTA  100

seq1  TCATGTAGAAGAATGCGAATTGATCCACTCCTATCTCCTTGTACTAAGGT  150
      |||||||||||||||  ||||||| || |||||| |||||||||||||||
seq2  TCATGTAGAAGAATGGAAATTGATTCATTCCTATATCCTTGTACTAAGGT  150

seq1  CAAATCTAAGTGGATCAAGGAACGCCACATAAAACCAGAGACACTGAAAC  200
      ||||||||||||||| ||||||| ||||||||||||||||||||||||||
seq2  CAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAAAC  200

seq1  TTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGTCACAGGGGAA  250
      |||||||||||||||| |||||||||||  |||||||||  ||||||| |
seq2  TTATAGAGGAGAAAGTAGGGAAAAGCCTCAAAGATATGGGTACAGGGGGA  250

seq1  AAATTCCTGCATAGAACAGCAATGGCTTGTGCTGTAAGATTGAGAATAGA  300
      ||||||||| ||||||||||||||||||||| |||||||| |||      
seq2  AAATTCCTGAATAGAACAGCAATGGCTTGTGATGTAAGATCGAG------  294

seq1  CAAATGGGACCTCATGAAACTGCAAAGCTTCTGCAAGGCAAAAGACACCG  350
        ||||||||||||| ||  ||||||||||||||||||||||||||||||
seq2  --AATGGGACCTCATAAAGTTGCAAAGCTTCTGCAAGGCAAAAGACACCG  342

seq1  ---TCAATAAGACAAAAAG-GCACCAACAGATTGGGAAAGGATCTTTACC  396
         ||||||||||||||||  |||||||||||||||||| ||||||||||
seq2  TCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAA-GATCTTTACC  391

seq1  TATCCTAAATCAGATAGGGGA---CTA-ATATCCAATATATATCAAGAAC  442
      |||||||||||||||||||||    || |||||||| |||||| ||||||
seq2  TATCCTAAATCAGATAGGGGATAGATATATATCCAACATATATAAAGAAC  441

seq1  TCAAGAAGGTGGATTCCAGAAAATCAAATAACCCCA-TTAAAAAATGGGG  491
      ||||||||||||| |||||||||||||||||| | | |||||||||||||
seq2  TCAAGAAGGTGGACTCCAGAAAATCAAATAACACAATTTAAAAAATGGGG  491

seq1  CTCAGAGCTAAACAAAGAATT  512
      ||||||||| |||||||||||
seq2  CTCAGAGCTGAACAAAGAATT  512

seq1: chr2_62148461_62148596
seq2: B6Ng01-132L13.g_74_209 (reverse)

seq1  CTATCCCCTCCTCCCTCCTCCCTGCCTCTATGAGGGTGCCCCCCCACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCCCTCCTCCCTCCTCCCTGCCTCTATGAGGGTGCCCCCCCACCTA  50

seq1  CCCACCCACTGCTAGTAGTGTCTATTAATCTTCTTTGAGATGTGCCTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCACTGCTAGTAGTGTCTATTAATCTTCTTTGAGATGTGCCTAGA  100

seq1  ACATTATGCAACTCAATTGACGCGTGCAAATTGAGT  136
      ||||||||||||||||||||||||||||||||||||
seq2  ACATTATGCAACTCAATTGACGCGTGCAAATTGAGT  136