BAC Information

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BAC

Clone NameB6Ng01-132P24
Chromosome2 (Build37)X (Build37)
Map Location 142,776,332 - 142,776,8743,662,788 - 3,663,817
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132P24.bB6Ng01-132P24.g
ACCDH933665DH933666
length9141,027
definitionDH933665|Mus musculus domesticus DNA, BAC clone: B6Ng01-132P24, 5' end.DH933666|Mus musculus domesticus DNA, BAC clone: B6Ng01-132P24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,332 - 142,776,874)(3,662,788 - 3,663,817)
sequence
gaattctttgttcagttctgagccacattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaatatcctttcccaatctgttggcggtct
ttttgtcttattgacggtgtcttttgccttgcggaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatgcgc
attcttctacacgataacaaccagttgtgccaggaccaattgctgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactggtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattgcaccagaggttcttt
tatccttgagaagactttttactatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagtttggaattt
ttgatggggattgcaatgaatctgtagtttgcttttgggcaagatagcca
ttttttacaattgtttatcctgccaatccatgagcatggggagatcttta
catcttctggagatcttctttaatttctttcttcaaagatttgaagtttt
tatcatatagatct
gaattcttgagtatcctggcagcaattggaaggcctagggaccatgggaa
ttctagaaccatagaaacgcctggaaatattggaagaacaaataaggatg
tgaggtctggataaacatcttatgctgctgagcataagatgtggggggaa
gcatgggagacctggcaaacatcaagtcctacttggcctgttaggccaga
tgtacatgggaatgctgggtaatatgagtatctcagtacacatagaaggt
ctcaataatgattagagtcttataaagcacagaagccaaatgaagtctaa
tataaatgtgaggtctggtacacaaatgaggtctagtaacttagggtggc
ctagagaatatggaaggccttgtgaccaagcaggttatggctccctggaa
tacctgttaaatttgagtgacctgggatgcatgggctttctgagaaaaac
ttgcggcttgctaagccctggagcctggaaagcttaggaggtgtgataag
cattagaagcctggtgaataaggacaggattactaagcctggggatgcta
gaatccaaaaatgatggggaaagccctggaggtctagaaggattgggagg
tgtgaaaatacatcagaggagtgttaagcctgtgagggctgaaaaaggac
tgccaaggatgagatggatccaagcatggggaagcctagtaagcaggaga
gtcctagaacctagagaagacctggaaacataggagacctagtacaaata
gggtatctgatggacacaaaaggtctgggttagcttgagattcttgaaaa
agttaggaggctcagtgagcaagagaagctttattcagaattaggaggcc
tagtaaacacagaaatgctagacctcatggaagatagggaaagcatggga
ggtctagaactatttggcaagttgatgccacggatgcctgggaaacttat
gaggcatgacatcctgatagctgaaccagtactggttgttcctactaact
atggaagacctagtaccagaaagacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776332_142776874
seq2: B6Ng01-132P24.b_415_964 (reverse)

seq1  AGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAG  50
      |||||| ||||||||||||||||| ||| |||||||||||||||||||||
seq2  AGATCTATATGATAAAAACTTCAAATCTTTGAAGAAAGAAATTAAAGAAG  50

seq1  ATCT-CAGAAGATGGAAGGATCT-CCCATGCTCATGGATTGGCAGGATCA  98
      |||| ||||||||| || ||||| |||||||||||||||||||||||| |
seq2  ATCTCCAGAAGATGTAAAGATCTCCCCATGCTCATGGATTGGCAGGATAA  100

seq1  AC-ATTGT-AAAAATGGCTATCTTG-CCAAAAGCAATCTACAGATTCAAT  145
      || ||||| |||||||||||||||| |||||||||| ||||||||||| |
seq2  ACAATTGTAAAAAATGGCTATCTTGCCCAAAAGCAAACTACAGATTCATT  150

seq1  GCAATCCCCATC-AAAATTCC-AACTCAATTCTTCAACGAATTAGAAGGA  193
      |||||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  GCAATCCCCATCAAAAATTCCAAACTCAATTCTTCAACGAATTAGAAGGA  200

seq1  GCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAAAG  243
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGTAAAAAG  250

seq1  TCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAA  293
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTTCTCAAGGATAAAAGAACCTCTGGTGCAATCACCATGCCTGACCTAA  300

seq1  AGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTATAGA  350

seq1  GACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCC  393
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACCAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGAACCC  400

seq1  ACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGT  450

seq1  GGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTA  493
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  GGAAGAAAGACAGCATTTTCAGCAATTGGTCCTGGCACAACTGGTTGTTA  500

seq1  TCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTAAGGT  543
      || |||||||||||| | ||||||||||||||||||||||||||||||||
seq2  TCGTGTAGAAGAATGCGCATCGATCCATACTTATCTCCTTGTACTAAGGT  550

seq1: chrX_3662788_3663817
seq2: B6Ng01-132P24.g_69_1095

seq1  GAATTCTTGAGTATCCTGGCAGCAATTGGAAGGCCTAGGGACCATGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAGTATCCTGGCAGCAATTGGAAGGCCTAGGGACCATGGGAA  50

seq1  TTCTAGAACCATAGAAACGCCTGGAAATATTGGAAGAACAAATAAGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAACCATAGAAACGCCTGGAAATATTGGAAGAACAAATAAGGATG  100

seq1  TGAGGTCTGGATAAACATCTTATGCTGCTGAGCATAAGATGTGGGGGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCTGGATAAACATCTTATGCTGCTGAGCATAAGATGTGGGGGGAA  150

seq1  GCATGGGAGACCTGGCAAACATCAAGTCCTACTTGGCCTGTTAGGCCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGAGACCTGGCAAACATCAAGTCCTACTTGGCCTGTTAGGCCAGA  200

seq1  TGTACATGGGAATGCTGGGTAATATGAGTATCTCAGTACACATAGAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATGGGAATGCTGGGTAATATGAGTATCTCAGTACACATAGAAGGT  250

seq1  CTCAATAATGATTAGAGTCTTATAAAGCACAGAAGCCAAATGAAGTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATAATGATTAGAGTCTTATAAAGCACAGAAGCCAAATGAAGTCTAA  300

seq1  TATAAATGTGAGGTCTGGTACACAAATGAGGTCTAGTAACTTAGGGTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATGTGAGGTCTGGTACACAAATGAGGTCTAGTAACTTAGGGTGGC  350

seq1  CTAGAGAATATGGAAGGCCTTGTGACCAAGCAGGTTATGGCTCCCTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAATATGGAAGGCCTTGTGACCAAGCAGGTTATGGCTCCCTGGAA  400

seq1  TACCTGTTAAATTTGAGTGACCTGGGATGCATGGGCTTTCTGAGAAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTTAAATTTGAGTGACCTGGGATGCATGGGCTTTCTGAGAAAAAC  450

seq1  TTGCGGCTTGCTAAGCCCTGGAGCCTGGAAAGCTTAGGAGGTGTGATAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGGCTTGCTAAGCCCTGGAGCCTGGAAAGCTTAGGAGGTGTGATAAG  500

seq1  CATTAGAAGCCTGGTGAATAAGGACAGGATTACTAAGCCTGGGGATGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAAGCCTGGTGAATAAGGACAGGATTACTAAGCCTGGGGATGCTA  550

seq1  GAATCCAAAAATGATGGGGAAAGCCCTGGAGGTCTAGAAGGATTGGGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAAAAATGATGGGGAAAGCCCTGGAGGTCTAGAAGGATTGGGAGG  600

seq1  TGTGAAAATACATCAGAGGAGTGTTAAGCCTGTGAGGGCTGAAAAAGGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAATACATCAGAGGAGTGTTAAGCCTGTGAGGGCTGAAAAAGGAC  650

seq1  TGCCAAGGATGAGATGGATCCAAGCATGGGGAAGCCTAGTAAGCAGGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGATGAGATGGATCCAAGCATGGGGAAGCCTAGTAAGCAGGAGA  700

seq1  GTCCTAGAACCTAGAGAAGACCTGGAAACATAGGAGACCTAGTACAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAGAACCTAGAGAAGACCTGGAAACATAGGAGACCTAGTACAAATA  750

seq1  GGGTATCTGATGGACACAAAAGGTCT-GGTTAGCTTGAGATTCTTGAAAA  799
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGGTATCTGATGGACACAAAAGGTCTGGGTTAGCTTGAGATTCTTGAAAA  800

seq1  AGTTAGGAGGCTCAGTGAGCAAGAGAAGC-TTAGTCAGAATTAGGAGGCC  848
      ||||||||||||||||||||||||||||| ||| ||||||||||||||||
seq2  AGTTAGGAGGCTCAGTGAGCAAGAGAAGCTTTATTCAGAATTAGGAGGCC  850

seq1  TAGTAAACACAGAAATGCTAGAACTCATGGAAGATAGGGAAAGCATGGGA  898
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TAGTAAACACAGAAATGCTAGACCTCATGGAAGATAGGGAAAGCATGGGA  900

seq1  GGTCTAGAACTATTTGGCAAAGTTGAATGCCACGGAGGCCTGGGAAACTT  948
      |||||||||||||||||| |||||| |||||||||| |||||||||||||
seq2  GGTCTAGAACTATTTGGC-AAGTTG-ATGCCACGGATGCCTGGGAAACTT  948

seq1  AGGAGGCATGGACAGCATGATTAGCTGAGCAAGTACGGGATG-TACTACT  997
      | ||||||| |||| | ||| ||||||| | ||||| || || | |||||
seq2  ATGAGGCAT-GACATCCTGA-TAGCTGAACCAGTACTGGTTGTTCCTACT  996

seq1  AACTATGGAAGACCTAGTAACAAAGAAAGACCT  1030
      ||||||||||||||||||| |  ||||||||||
seq2  AACTATGGAAGACCTAGTACC--AGAAAGACCT  1027