BAC Information

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BAC

Clone NameB6Ng01-133A13
Chromosome2 (Build37)
Map Location 56,425,117 - 56,426,400
singlet/doubletsinglet
Overlap genenone
Upstream geneKcnj3
Downstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910, Gpd2, LOC271788
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133A13.bB6Ng01-133A13.g
ACCDH933691DH933692
length1,259409
definitionDH933691|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A13, 5' end.DH933692|Mus musculus domesticus DNA, BAC clone: B6Ng01-133A13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgagaagtgtgcctttctgatcatttacttaagctctctggt
tttgaaggaaacatcattgctctcttagaactggccagaaagtctggtaa
ttggaagtcaaagttcccttttggagatgatggcctttctcttaatatac
tttggccacttacttaatagggttacacattaataaaaaaatcccacaga
ttaaagctatggggttatttttctaataaaaaaggctccttaaatatctg
gcattttacatcaaattttaatgtttccaatcttgaaatttcagcaaaaa
aatggttgatgtgggttctgttttgataaattataaaggtaaaccttaac
gaccattgaatagaatcacctttgctactcagggtaatagaataaaataa
accaagcaaacacatttttcttactgccacatgcctctccttaataataa
cttttgtcttttttgcagaaatagatgctgtgtaagtctcattaaattac
ctgacgggtggaataaatacacaggccatatagctcggcagtccatagta
aactgagcaagggtcttgatatcgcagagttctgcttatttacacatgcc
ttggactcttctcacagatatgtaaattattccagttaaaactaaatgct
aaagtctacaccattagtcttccacttcatgatctccacatggggctgtt
agaaggataatgtaccatacaatacacggtttacttttaattaatagaaa
aaaatgtgaaatgaatattaaatgtagcttaatgtgaaagaaagctcaaa
gcagtttggtgtaatttatttattttaaaaatattcagtcctgcttcgtg
attagaaaatacgtaataatttactggactagaaaggcttgctggagcct
ttggaaggaacaaagaatttgaagaggcctttgcaagccagacagaagtc
ctgggctggatacaaaggctaagattggcaagaccaggctctgcttggtt
tttgcatcctaacagacttgtccatctgaaactcacattccctgctgaga
tgtccctgctctatacatacaaagtctagtcttgcttttaaatctgaaag
caaaaagctcatcaaatagagctttaattaaacccagattggttgttctg
gttttaattcaatggtgttaggtatgctttgttttaataaatagaaatcc
aattccaacgtaacactgttccaaatacagaatgatttaattatattagc
attatttat

attaaattctcagtcaaatagatggaattagaaaatatcaccctgagcga
ggtaacccagtcacaaaagaacatacatggtatgcactcactgataagtg
gatactagcccaaaagctcagaatatccatgatacaactcacagactgtc
tgaagcttaacaagaaggaaggccaaagtgtggatacttctatcccactt
atgagagggaacaaaatgatcataggagacagatagagagatggacctta
gtgggagaggggaggggagaaagaagtgggagcaggaccatgtataggaa
aagacagtagagaagtccagagggcctagagaacaatagaaataggtggg
ggtggggggaactggtgttagtattgaattcttttttatgttatttattg
tttctgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_56425117_56426400
seq2: B6Ng01-133A13.b_49_1307 (reverse)

seq1  ATAAATAATGCT-ATATAATTAAAATTCCATTCTGTGATTGGGAACAGTG  49
      |||||||||||| |||||||||||    |||||||| ||| |||||||||
seq2  ATAAATAATGCTAATATAATTAAA---TCATTCTGT-ATTTGGAACAGTG  46

seq1  TGATAAACTGTTTGTGAATTGGTAATTCTATTTATTAAAAACAGAGGCAT  99
      | |      |||   ||||||| | ||||||||||| |||||| | ||| 
seq2  TTA-----CGTT--GGAATTGG-ATTTCTATTTATT-AAAACA-AAGCA-  85

seq1  TACTTTAGACACATTGAATTATAACACAGACAAACAGATCTTGGGTTTTA  149
      ||| | | || |||||||||| ||| ||||  |||  ||||  || ||||
seq2  TACCTAACAC-CATTGAATTAAAAC-CAGAACAACCAATCT--GGGTTTA  131

seq1  ATTAAAAGCTCTATTTGATGAGCTTTTTTGCTCTCAGATTTAATAGCAGA  199
      ||| ||||||||||||||||||| |||||||| |||||||||| ||||  
seq2  ATT-AAAGCTCTATTTGATGAGC-TTTTTGCTTTCAGATTTAAAAGCAAG  179

seq1  CCTAGACTTTGTATGGTATAGAGCAGGGGACAATCTCAGCAGGGAATGTG  249
       ||||||||||||| |||||||||| ||||| ||||||||||||||||| 
seq2  ACTAGACTTTGTAT-GTATAGAGCA-GGGAC-ATCTCAGCAGGGAATGT-  225

seq1  GAGTCTCAGATGGACAAGGTCTGTTAGGATGCAAAAAACCAAGCAGAGCC  299
      |||| |||||||||||| |||||||||||||| |||||||||||||||||
seq2  GAGTTTCAGATGGACAA-GTCTGTTAGGATGC-AAAAACCAAGCAGAGCC  273

seq1  TGGTCTTGCCAATCTTAGCCTTTGTATCCAGCCCAGGACTTCTGTCTGGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTGCCAATCTTAGCCTTTGTATCCAGCCCAGGACTTCTGTCTGGC  323

seq1  TTGCAAAGGCCTCTTCAAATTCTTTGTTCCTTCCAAAGGCTCCAGCAAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAGGCCTCTTCAAATTCTTTGTTCCTTCCAAAGGCTCCAGCAAGC  373

seq1  C-TTCTAGTCCAGTAAATTATTACGTATTTTCTAATCACGAAGCAGGACT  448
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAGTCCAGTAAATTATTACGTATTTTCTAATCACGAAGCAGGACT  423

seq1  GAATATTTTTAAAATAAATAAATTACACCAAACTGCTTTGAGCTTTCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTTAAAATAAATAAATTACACCAAACTGCTTTGAGCTTTCTTT  473

seq1  CACATTAAGCTACATTTAATATTCATTTCACATTTTTTTCTATTAATTAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAAGCTACATTTAATATTCATTTCACATTTTTTTCTATTAATTAA  523

seq1  AAGTAAACCGTGTATTGTATGGTACATTATCCTTCTAACAGCCCCATGTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACCGTGTATTGTATGGTACATTATCCTTCTAACAGCCCCATGTG  573

seq1  GAGATCATGAAGTGGAAGACTAATGGTGTAGACTTTAGCATTTAGTTTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCATGAAGTGGAAGACTAATGGTGTAGACTTTAGCATTTAGTTTTA  623

seq1  ACTGGAATAATTTACATATCTGTGAGAAGAGTCCAAGGCATGTGTAAATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATAATTTACATATCTGTGAGAAGAGTCCAAGGCATGTGTAAATA  673

seq1  AGCAGAACTCTGCGATATCAAGACCCTTGCTCAGTTTACTATGGACTGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAACTCTGCGATATCAAGACCCTTGCTCAGTTTACTATGGACTGCC  723

seq1  GAGCTATATGGCCTGTGTATTTATTCCACCCGTCAGGTAATTTAATGAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATATGGCCTGTGTATTTATTCCACCCGTCAGGTAATTTAATGAGA  773

seq1  CTTACACAGCATCTATTTCTGCAAAAAAGACAAAAGTTATTATTAAGGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACAGCATCTATTTCTGCAAAAAAGACAAAAGTTATTATTAAGGAG  823

seq1  AGGCATGTGGCAGTAAGAAAAATGTGTTTGCTTGGTTTATTTTATTCTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGTGGCAGTAAGAAAAATGTGTTTGCTTGGTTTATTTTATTCTAT  873

seq1  TACCCTGAGTAGCAAAGGTGATTCTATTCAATGGTCGTTAAGGTTTACCT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTGAGTAGCAAAGGTGATTCTATTCAATGGTCGTTAAGGTTTACCT  923

seq1  TTATAATTTATCAAAACAGAACCCACATCAACCATTTTTTTGCTGAAATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTTATCAAAACAGAACCCACATCAACCATTTTTTTGCTGAAATT  973

seq1  TCAAGATTGGAAACATTAAAATTTGATGTAAAATGCCAGATATTTAAGGA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTGGAAACATTAAAATTTGATGTAAAATGCCAGATATTTAAGGA  1023

seq1  GCCTTTTTTATTAGAAAAATAACCCCATAGCTTTAATCTGTGGGATTTTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTTTATTAGAAAAATAACCCCATAGCTTTAATCTGTGGGATTTTT  1073

seq1  TTATTAATGTGTAACCCTATTAAGTAAGTGGCCAAAGTATATTAAGAGAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATGTGTAACCCTATTAAGTAAGTGGCCAAAGTATATTAAGAGAA  1123

seq1  AGGCCATCATCTCCAAAAGGGAACTTTGACTTCCAATTACCAGACTTTCT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATCATCTCCAAAAGGGAACTTTGACTTCCAATTACCAGACTTTCT  1173

seq1  GGCCAGTTCTAAGAGAGCAATGATGTTTCCTTCAAAACCAGAGAGCTTAA  1248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTTCTAAGAGAGCAATGATGTTTCCTTCAAAACCAGAGAGCTTAA  1223

seq1  GTAAATGATCAGAAAGGCACACTTCTCAGTGAATTC  1284
      ||||||||||||||||||||||||||||||||||||
seq2  GTAAATGATCAGAAAGGCACACTTCTCAGTGAATTC  1259


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