BAC Information

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BAC

Clone NameB6Ng01-133I05
Chromosome2 (Build37)
Map Location 44,226,144 - 44,227,390
singlet/doubletsinglet
Overlap geneArhgap15
Upstream geneLOC100041245, Kynu
Downstream geneGtdc1, Zeb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133I05.bB6Ng01-133I05.g
ACCDH934040DH934041
length1,2131,159
definitionDH934040|Mus musculus domesticus DNA, BAC clone: B6Ng01-133I05, 5' end.DH934041|Mus musculus domesticus DNA, BAC clone: B6Ng01-133I05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattctttttaatagctgagtagtactccattgtgtaaatgtacg
acattttctgtatccattcctccgttgagagacatctgggttctttccag
cttctggctattataaataaggcaacaagcactcttaaccaccaaaccat
ctatctctttggcctcaaggactagaatatcttttgaccttgataagagg
ttgaaattatgctgggtgggactttatagtctgaaagtcagcccaccttc
cttgtgtgattaattctgttgccatatccttccctcctcagtgaatagat
gacaattaaaccttgcatgttgcattctcttttacttattctccataggg
agcatagcccatgattgctagctccaagagtagtgtaagaaggctaacaa
taaaattaagattggggattgctcatatgctgttttgtaacaatgggaca
ggcagtgatgacaggtacagaacctattcatgagcaggatgatagcctga
ttgctaaaactcttaccaacagtgaattggggtattatacctgtggagaa
tggcttttgtttcacacgagcatttgcaaataatagtggagagttcctgg
aagtgattactaagtatcagtgaaagtccataaatcattgtttataacga
aagtagttgatattactctggaatgagagttgactgaaaaagagtgtcct
ctgtagatacaggctcactgatagcaagagaattgaaagcatactgatgt
aatagggatagagagatggggtttaattacaagaagtcaggtagctgtaa
tcttagcaacatgtaacggggcctaaggtgcaggcaaggtgatttgactt
acagagagtcaagatgtagtaataggatatgggattctcagagcaagaga
aacaggaagccaataaacatgcccttctgagagtgagcgcaacacataat
cactggattttagttgattcatggtacttgacttttgagtccagggacca
gaagccaagctagagttgtcatctttgcaaatgtattgactcagatcagt
aatagctgagtagctggagttgcatatggaataaggacgattgtatggct
ttacatgggactcctaaactatctcctaccctaccctacctgactctaat
cctaaactctaacccaaactctacctaaccctaacctaacttaaccctaa
ctaaccgactgag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagg
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggtttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatcccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggaggagctgagaagtacccaagagctaaagggatctgcaccctatagg
tggacacattatgactaccagtacccggagctctgactctagctgcatat
gtaatcaaagatgctagtcgcaatccctgcaagaaaggcccatgaccgca
aacttaatgccagtacagggacgccaagcaaagggggatgaggtgtgggt
aggggaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_44226144_44227390
seq2: B6Ng01-133I05.b_47_1259 (reverse)

seq1  CTCAGTCTGGGTTAGGGTTAGGGGTTAAGGTTAGGGTTAGGGGTTAGGGT  50
      |||||||  |||||  |||| |||||||       ||||  |||||||||
seq2  CTCAGTC--GGTTA--GTTA-GGGTTAA-------GTTA--GGTTAGGGT  36

seq1  TAGG-AGA-TTAGGGTTAGAGTTAGGGAATTAGAGTTAGAGTTAGGGTTA  98
      |||| ||| || |||||||||||  || ||||||||   || ||||| ||
seq2  TAGGTAGAGTTTGGGTTAGAGTTTAGG-ATTAGAGT--CAGGTAGGG-TA  82

seq1  GGGTTAGGAGATTAGGTTTAGGAAGTCCCATGTAAAAGCCATACATATCG  148
      ||| ||||||||   ||||||| |||||||||| ||||||||||| ||||
seq2  GGG-TAGGAGAT--AGTTTAGG-AGTCCCATGT-AAAGCCATACA-ATCG  126

seq1  TCCTTATTTCCACTATGCAACTCCAAGCCTACCTCAGCTATTAACTTGAT  198
      |||||| ||||| ||||||||||||   ||| |||||||||||   ||||
seq2  TCCTTA-TTCCA-TATGCAACTCCA--GCTA-CTCAGCTATTA--CTGAT  169

seq1  CTGAGTCAATTACATTTGCATAGATGACAACTCTTAGCCTTGGCTTCTGG  248
      ||||||||| |||||||||| |||||||||||| ||| ||||||||||||
seq2  CTGAGTCAA-TACATTTGCAAAGATGACAACTC-TAG-CTTGGCTTCTGG  216

seq1  TCCCTGGACTCAAAAGTTCAAGTACCATGAATCAACTAAAATCCAGTGAT  298
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TCCCTGGACTCAAAAG-TCAAGTACCATGAATCAACTAAAATCCAGTGAT  265

seq1  TATGTGTTGCGCTCACTCTCAGAAGGGCATGTTTATTGGCTTCCTGTTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTGCGCTCACTCTCAGAAGGGCATGTTTATTGGCTTCCTGTTTC  315

seq1  TCTTGCTCCTGAGAATCCCATATCCTATTACTACATCTTGACTCTCTGTA  398
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCT-CTGAGAATCCCATATCCTATTACTACATCTTGACTCTCTGTA  364

seq1  AGTCAAATCACCTTGCCTGCACCTTAGGCCCCGTTACATGTTGCTAAGAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATCACCTTGCCTGCACCTTAGGCCCCGTTACATGTTGCTAAGAT  414

seq1  TACAGCTACCTGACTTCTTGTAATTAAACCCCATCTCTCTATCCCTATTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTACCTGACTTCTTGTAATTAAACCCCATCTCTCTATCCCTATTA  464

seq1  CATCAGTATGCTTTCAATTCTCTTGCTATCAGTGAGCCTGTATCTACAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTATGCTTTCAATTCTCTTGCTATCAGTGAGCCTGTATCTACAGA  514

seq1  GGACACTCTTTTTCAGTCAACTCTCATTCCAGAGTAATATCAACTACTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACTCTTTTTCAGTCAACTCTCATTCCAGAGTAATATCAACTACTTT  564

seq1  CGTTATAAACAATGATTTATGGACTTTCACTGATACTTAGTAATCACTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTATAAACAATGATTTATGGACTTTCACTGATACTTAGTAATCACTTC  614

seq1  CAGGAACTCTCCACTATTATTTGCAAATGCTCGTGTGAAACAAAAGCCAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACTCTCCACTATTATTTGCAAATGCTCGTGTGAAACAAAAGCCAT  664

seq1  TCTCCACAGGTATAATACCCCAATTCACTGTTGGTAAGAGTTTTAGCAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACAGGTATAATACCCCAATTCACTGTTGGTAAGAGTTTTAGCAAT  714

seq1  CAGGCTATCATCCTGCTCATGAATAGGTTCTGTACCTGTCATCACTGCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTATCATCCTGCTCATGAATAGGTTCTGTACCTGTCATCACTGCCT  764

seq1  GTCCCATTGTTACAAAACAGCATATGAGCAATCCCCAATCTTAATTTTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATTGTTACAAAACAGCATATGAGCAATCCCCAATCTTAATTTTAT  814

seq1  TGTTAGCCTTCTTACACTACTCTTGGAGCTAGCAATCATGGGCTATGCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGCCTTCTTACACTACTCTTGGAGCTAGCAATCATGGGCTATGCTC  864

seq1  CCTATGGAGAATAAGTAAAAGAGAATGCAACATGCAAGGTTTAATTGTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGAGAATAAGTAAAAGAGAATGCAACATGCAAGGTTTAATTGTCA  914

seq1  TCTATTCACTGAGGAGGGAAGGATATGGCAACAGAATTAATCACACAAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCACTGAGGAGGGAAGGATATGGCAACAGAATTAATCACACAAGG  964

seq1  AAGGTGGGCTGACTTTCAGACTATAAAGTCCCACCCAGCATAATTTCAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGGCTGACTTTCAGACTATAAAGTCCCACCCAGCATAATTTCAAC  1014

seq1  CTCTTATCAAGGTCAAAAGATATTCTAGTCCTTGAGGCCAAAGAGATAGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATCAAGGTCAAAAGATATTCTAGTCCTTGAGGCCAAAGAGATAGA  1064

seq1  TGGTTTGGTGGTTAAGAGTGCTTGTTGCCTTATTTATAATAGCCAGAAGC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGGTGGTTAAGAGTGCTTGTTGCCTTATTTATAATAGCCAGAAGC  1114

seq1  TGGAAAGAACCCAGATGTCTCTCAACGGAGGAATGGATACAGAAAATGTC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAACCCAGATGTCTCTCAACGGAGGAATGGATACAGAAAATGTC  1164

seq1  GTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTC  1247
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTC  1213