BAC Information

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BAC

Clone NameB6Ng01-133J23
Chromosome2 (Build37)
Map Location 58,233,931 - 58,325,607
singlet/doubletdoublet
Overlap geneAcvr1
Upstream geneLOC271788, Galnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062
Downstream geneLOC674940, Upp2, BC062650, Pkp4, LOC625354, 2310032F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133J23.bB6Ng01-133J23.g
ACCDH934122DH934123
length1,2121,094
definitionDH934122|Mus musculus domesticus DNA, BAC clone: B6Ng01-133J23, 5' end.DH934123|Mus musculus domesticus DNA, BAC clone: B6Ng01-133J23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,233,931 - 58,235,151)(58,324,511 - 58,325,607)
sequence
gaattctacctacaaagtgtgaataacacgttgttatttccccagatctt
ggctattataaatatttttaatgttttaatttgcatttgaatctttctca
tacttttgctggctgtgaattatctttttcatcttaatgtttataaactc
cttagctgttgcagttattaacttttttgtatgtgagcaggtggctagtg
gtttttttcgctttactttgtgacatatagttacagaaattctaaattgt
gaactatctggtgatgctttccttataaaacttataaacactatgaatta
ccaagaaggttttcatccctgttctttgatttatataccagttatctacc
aggcctgctgatccatggttaaaccttatagttaaatgagtggaattttc
atggttcccaaaaatctgtgcatgaaacataaacagcatcaagggatact
actgtgaaataataaaccctatattttatcttatgcagcactaaagtctc
aggctttggaaacagcttctgcggaagcagcaccttaggtgctaacacgt
tacaaagttcactgggatcagcacaactccaccagattagatgacgacaa
taatagcactgaaaacaatggcaatatccaacatggacagcgtatgcgaa
agcattaccacaatatgatcatcagaacccaccaatactttctggggtgt
cccatttggtaaatagctgaatgacgacttaaacaccatgtccatctgac
cctagaagccacaattatatcaaggaattacctcatgctcaaatgggtca
tgaaataatgctagaaacatgcaaacaggaactaaggactaatggggtgg
ttgatatcttcaaatctgccaagtgaatgctaaacacacaagtagatttg
aaacgtgatattgaaaaatgaaacaattttcagatatatgcaattcaaag
atgaaaaataaggcacagaatattaataagataaagtgatttttttaaac
atacagaagagaaatgacaccgcccaaatttcatgattaactgtactaca
caaagttagctcactgcaaatgaccagaatccaatgacaaatgacagcac
ctactagggagtagttgttattgaatatactggatgaacaattatagctt
caattggaagagttctctcatctcaggagccaatctctgagaatatcaat
ttgggaagaaat
gaattccaggaattgtgaatttttgggtcaggcatgatttaagaataata
aaatgatgatggtgacggcggtggcggcttcatgaattccatgaggctgg
tacagaatgctcttctagcttttgagacagggtctcttctggcccaggca
gacccaaaactcggtatctagccgagaatcgtcttttgatgctctctcct
ctctctcttgagtactgggggttattataagtatacatccctatggccaa
atagagttttaaagtcctgattttcagggctgaggggatggctcagataa
taagtgcttgttgcacaagcatgaagactggattttgatccccagtgcct
atgtagaaaagcttgcacagtggcatgtatgtatgtgcctatagtctcag
tgctggggatgcagaaagggcaagatctgtggagtttgctggccaagcag
tctaggtttatctgtgagccttaggtttagtctgaaacctgtctcaatta
agtaagtgactgagccaaacacccagtattagcgtcacgtatatatacgt
agctgccctccccttcccattccccccacacatgaaggacacactttatt
ttacacttgatcttagccaaaaggccgagaagcgatcacactttatttta
aatacaatcctcagtttcactatttgtatgtggagtgtagatatttgcag
gtagcatgacgggttttgtcagcttctcattgagatggtgtgtaggaatg
ccttgtattgtctcaccccttctggtgagcaggctttttgggtggctata
gcagctcctgccttctgacagtctgtttggcggacgctgtcgcaggctat
ttgatcacattgtgaatcagaaaaaccctgtggtggtgtggctcagccct
agcacacacctttaatccaagagctttcttcgaatggaattataaagtca
gcacagtcaagaggcagggcaagcatctagttgacatggagtgaacaaag
gaaatctcaggaaagagaaggcggtctttgagttgaggggtatcttaact
aattcatggaggagaaaaagagccctttttcatctgggaatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_58233931_58235151
seq2: B6Ng01-133J23.b_46_1257

seq1  GAATTCTACCTACAAAGTGTGAATAACACGTTGTTATTTCCCCAGATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTACAAAGTGTGAATAACACGTTGTTATTTCCCCAGATCTT  50

seq1  GGCTATTATAAATATTTTTAATGTTTTAATTTGCATTTGAATCTTTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTATAAATATTTTTAATGTTTTAATTTGCATTTGAATCTTTCTCA  100

seq1  TACTTTTGCTGGCTGTGAATTATCTTTTTCATCTTAATGTTTATAAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGCTGGCTGTGAATTATCTTTTTCATCTTAATGTTTATAAACTC  150

seq1  CTTAGCTGTTGCAGTTATTAACTTTTTTGTATGTGAGCAGGTGGCTAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTGTTGCAGTTATTAACTTTTTTGTATGTGAGCAGGTGGCTAGTG  200

seq1  GTTTTTTTCGCTTTACTTTGTGACATATAGTTACAGAAATTCTAAATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTCGCTTTACTTTGTGACATATAGTTACAGAAATTCTAAATTGT  250

seq1  GAACTATCTGGTGATGCTTTCCTTATAAAACTTATAAACACTATGAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATCTGGTGATGCTTTCCTTATAAAACTTATAAACACTATGAATTA  300

seq1  CCAAGAAGGTTTTCATCCCTGTTCTTTGATTTATATACCAGTTATCTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGGTTTTCATCCCTGTTCTTTGATTTATATACCAGTTATCTACC  350

seq1  AGGCCTGCTGATCCATGGTTAAACCTTATAGTTAAATGAGTGGAATTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGCTGATCCATGGTTAAACCTTATAGTTAAATGAGTGGAATTTTC  400

seq1  ATGGTTCCCAAAAATCTGTGCATGAAACATAAACAGCATCAAGGGATACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTCCCAAAAATCTGTGCATGAAACATAAACAGCATCAAGGGATACT  450

seq1  ACTGTGAAATAATAAACCCTATATTTTATCTTATGCAGCACTAAAGTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAAATAATAAACCCTATATTTTATCTTATGCAGCACTAAAGTCTC  500

seq1  AGGCTTTGGAAACAGCTTCTGCGGAAGCAGCACCTTAGGTGCTAACACGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGGAAACAGCTTCTGCGGAAGCAGCACCTTAGGTGCTAACACGT  550

seq1  TACAAAGTTCACTGGGATCAGCACAACTCCACCAGATTAGATGACGACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGTTCACTGGGATCAGCACAACTCCACCAGATTAGATGACGACAA  600

seq1  TAATAGCACTGAAAACAATGGCAATATCCAACATGGACAGCGTATGCGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCACTGAAAACAATGGCAATATCCAACATGGACAGCGTATGCGAA  650

seq1  AGCATTACCACAATATGATCATCAGAACCCACCAATACTTTCTGGGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTACCACAATATGATCATCAGAACCCACCAATACTTTCTGGGGTGT  700

seq1  CCCATTTGGTAAATAGCTGAATGACGACTTAAACACCATGTCCATCTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTGGTAAATAGCTGAATGACGACTTAAACACCATGTCCATCTGAC  750

seq1  CCTAGAAGCCACAATTATATCAAGGAATTACCTCATGCTCAAATGGGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGCCACAATTATATCAAGGAATTACCTCATGCTCAAATGGGTCA  800

seq1  TGAAATAATGCTAGAAACATGCAAACAGGAACTAAGGACTAATGGGGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAATGCTAGAAACATGCAAACAGGAACTAAGGACTAATGGGGTGG  850

seq1  TTGATATCTTCAAATCTGCCAAGTGAATGCTAAAACACACAAGTAGATTT  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTGATATCTTCAAATCTGCCAAGTGAATGCT-AAACACACAAGTAGATTT  899

seq1  GAAACGTGATATTGAAAAATGAAACAATTTTCAGATATATGCAATTCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGTGATATTGAAAAATGAAACAATTTTCAGATATATGCAATTCAAA  949

seq1  GATGAAAAATAAGGCACAGAATATTAATAAGATAAAGTGATTTTTTTAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAAATAAGGCACAGAATATTAATAAGATAAAGTGATTTTTTTAAA  999

seq1  ACAATACAGAAGAGAAAATGACAACCGCCCAAATTTCATGATTAACTGTA  1050
         ||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  --CATACAGAAGAG-AAATGAC-ACCGCCCAAATTTCATGATTAACTGTA  1045

seq1  CTACACAAAGTTAGCTCACTGCAAAATGACCCAGAATCCAAATGACAAAT  1100
      |||||||||||||||||||||| |||||| ||||||||| ||||||||||
seq2  CTACACAAAGTTAGCTCACTGC-AAATGA-CCAGAATCC-AATGACAAAT  1092

seq1  GACAAGCA-CTACTAGGGAGTAGGTTTGTTATTGATATTACT-GATGAAC  1148
      ||| |||| ||||||||||||||  ||||||||||   |||| |||||||
seq2  GAC-AGCACCTACTAGGGAGTAG--TTGTTATTGAATATACTGGATGAAC  1139

seq1  AATTAATAGCTTTAAATGTGAAGAGTTCACTCAACTCAGGAAGCAAAATC  1198
      |||| ||||||| || || ||||||||| |||| |||||||  |||  ||
seq2  AATT-ATAGCTTCAATTG-GAAGAGTTCTCTCATCTCAGGAGCCAATCTC  1187

seq1  TGAGA--ATCAAATTGGGAAGAAAT  1221
      |||||  ||||| ||||||||||||
seq2  TGAGAATATCAATTTGGGAAGAAAT  1212

seq1: chr2_58324511_58325607
seq2: B6Ng01-133J23.g_65_1158 (reverse)

seq1  ACCATGTCCCAGATGAAAAAAGGCTC--TTTCTCCTCCATGATATAGTT-  47
      ||||| |||||||||||||| |||||  ||||||||||||||  ||||| 
seq2  ACCAT-TCCCAGATGAAAAAGGGCTCTTTTTCTCCTCCATGAATTAGTTA  49

seq1  AGATACCCCTCAACTCAAAGACCCGCCTTTCTCTTTCCTGGGTTTTCCTA  97
      ||||||||||||||||||||| ||||| |||||||||||| | |||||| 
seq2  AGATACCCCTCAACTCAAAGA-CCGCC-TTCTCTTTCCTGAGATTTCCTT  97

seq1  TGTTCACTCCCTGTCAACTGGTTGCTTGCCCTGCCTCTTGACCTGTGGCT  147
      |||||||||| |||||||| | ||||||||||||||||||| |||| |||
seq2  TGTTCACTCCATGTCAACTAGATGCTTGCCCTGCCTCTTGA-CTGT-GCT  145

seq1  GACTTTATAATTCCATTCGAAGAAAGCTCTTTGGATTAAAGGTGTGTGCT  197
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GACTTTATAATTCCATTCGAAGAAAGCTC-TTGGATTAAAGGTGTGTGCT  194

seq1  AGGGCTGAGCCACACCACCACAGGGTTTTTCTGATTCACAATGTGATCAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGAGCCACACCACCACAGGGTTTTTCTGATTCACAATGTGATCAA  244

seq1  ATAGCCTGCGACAGCGTCCGCCAAACAGACTGTCAGAAGGCAGGAGCTGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTGCGACAGCGTCCGCCAAACAGACTGTCAGAAGGCAGGAGCTGC  294

seq1  TATAGCCACCCAAAAAGCCTGCTCACCAGAAGGGGTGAGACAATACAAGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCCACCCAAAAAGCCTGCTCACCAGAAGGGGTGAGACAATACAAGG  344

seq1  CATTCCTACACACCATCTCAATGAGAAGCTGACAAAACCCGTCATGCTAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTACACACCATCTCAATGAGAAGCTGACAAAACCCGTCATGCTAC  394

seq1  CTGCAAATATCTACACTCCACATACAAATAGTGAAACTGAGGATTGTATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAATATCTACACTCCACATACAAATAGTGAAACTGAGGATTGTATT  444

seq1  TAAAATAAAGTGTGATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAGTGTGATCGCTTCTCGGCCTTTTGGCTAAGATCAAGTGTAA  494

seq1  AATAAAGTGTGTCCTTCATGTGTGGGGGGAATGGGAAGGGGAGGGCAGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTGTGTCCTTCATGTGTGGGGGGAATGGGAAGGGGAGGGCAGCT  544

seq1  ACGTATATATACGTGACGCTAATACTGGGTGTTTGGCTCAGTCACTTACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTATATATACGTGACGCTAATACTGGGTGTTTGGCTCAGTCACTTACT  594

seq1  TAATTGAGACAGGTTTCAGACTAAACCTAAGGCTCACAGATAAACCTAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGAGACAGGTTTCAGACTAAACCTAAGGCTCACAGATAAACCTAGA  644

seq1  CTGCTTGGCCAGCAAACTCCACAGATCTTGCCCTTTCTGCATCCCCAGCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGGCCAGCAAACTCCACAGATCTTGCCCTTTCTGCATCCCCAGCA  694

seq1  CTGAGACTATAGGCACATACATACATGCCACTGTGCAAGCTTTTCTACAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTATAGGCACATACATACATGCCACTGTGCAAGCTTTTCTACAT  744

seq1  AGGCACTGGGGATCAAAATCCAGTCTTCATGCTTGTGCAACAAGCACTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTGGGGATCAAAATCCAGTCTTCATGCTTGTGCAACAAGCACTTA  794

seq1  TTATCTGAGCCATCCCCTCAGCCCTGAAAATCAGGACTTTAAAACTCTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGAGCCATCCCCTCAGCCCTGAAAATCAGGACTTTAAAACTCTAT  844

seq1  TTGGCCATAGGGATGTATACTTATAATAACCCCCAGTACTCAAGAGAGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCATAGGGATGTATACTTATAATAACCCCCAGTACTCAAGAGAGAG  894

seq1  AGGAGAGAGCATCAAAAGACGATTCTCGGCTAGATACCGAGTTTTGGGTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAGCATCAAAAGACGATTCTCGGCTAGATACCGAGTTTTGGGTC  944

seq1  TGCCTGGGCCAGAAGAGACCCTGTCTCAAAAGCTAGAAGAGCATTCTGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGGCCAGAAGAGACCCTGTCTCAAAAGCTAGAAGAGCATTCTGTA  994

seq1  CCAGCCTCATGGAATTCATGAAGCCGCCACCGCCGTCACCATCATCATTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCATGGAATTCATGAAGCCGCCACCGCCGTCACCATCATCATTT  1044

seq1  TATTATTCTTAAATCATGCCTGACCCAAAAATTCACAATTCCTGGAATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCTTAAATCATGCCTGACCCAAAAATTCACAATTCCTGGAATTC  1094