BAC Information

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BAC

Clone NameB6Ng01-133K02
Chromosome2 (Build37)
Map Location 131,606,166 - 131,607,177
singlet/doubletsinglet
Overlap genenone
Upstream gene4930402H24Rik, LOC100043766, C030014O09Rik, LOC627316, Atrn, LOC100043768, Gfra4, Adam33, Siglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb, Cdc25b, 2310035K24Rik, D430028G21Rik, Pank2, Rnf24, LOC100043463, Smox, Adra1d
Downstream geneLamr1-ps1, Prnp, Prnd, Rassf2, Slc23a2, LOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2, Prokr2, 1700026D11Rik, Prei4, LOC100043781, LOC383801, LOC668906, Chgb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133K02.bB6Ng01-133K02.g
ACCDH934128DH934129
length1,0791,168
definitionDH934128|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K02, 5' end.DH934129|Mus musculus domesticus DNA, BAC clone: B6Ng01-133K02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggctggttctggtctttcctgctgactcatgccaatttgacag
aggcctgggtgtttctgctggatcatgccacagctgctgatttatgtttg
gtgactcttcttttttattttaagatttatttattatatgtaagcaactg
tagctgtcttgagacacttttctttctctctccagccctgctcactctag
cccaaagatttatttattattatatgtaagtgcactgtagttgtcttcag
acaccacagaaaagggcatcagatctcactatggattattatgagccacc
atgtggttactgggatttgaactcaggaccttcagaatagcagtcagtgc
tcttaaccactgagccctctctccagtcgattggtgactcttttgaacag
gactattggtatcatgacaatggagattggaattgccccaaagaacttct
aaacagatccacatacccttatcctatttaccatcttttctcccctacct
ttggacagtggactagaagaggagggggatcaaagcttttgagaacctta
ttaaagtaggttttgaaaactcagcctacacattagtaattacaagaagc
atgttcatcttttaagcatcattctctatatcatcatagtaactctttga
ggtgggtattattataatctggtttttacttagggaaactgaagcacaac
gtctatgttttcccaggtattataagactctgggaccccctgagtgaacc
acgtggagctagaatcgatgcaaaggcaagaagaattttatttcatccag
catgctggggtcaccctgcacatagggagagagtgaccccgtgcagccca
tccagcgagcttttatgcagttctcaggccaccgccattaggcacaatat
gattggcagaacagtgtgacttttaaactgatggtctatagggagtgagg
taggtggccatggtctcagatgtgtctacagctctgatgatggtcctcgt
ctgtggtctgagatgtaattagtccctcctttcagaggggaggggtgcta
tgtcttatggcctttcgcttcagagggga
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggaattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccat
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattaccgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttccttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt
gaaagataagttattgcacctggcccctcctacaccaagaaagaagcaca
acgtttagtgggtctattggattctggagacaacacatccctcacttggg
tgtgtacttaggctatttaccaagtgactcggaaagctgctagctttgtg
tggggctggaacagagatgcccttcaacaggtccaggctgctgtgcagct
gctctaccacttggaccatatgaccagcaatccgatgtacttgaggtgtc
tgtggcctgaaaagatgctgtttgagcctcgggcaagtcccctgtagtga
atcccaaaaaaggccttggatttggaacgagcttaccatcatctgcgaac
aacattctccccttgaaaaacgctttgccgtcattgggccttagtaacga
tagcctgactaaagtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_131606166_131607177
seq2: B6Ng01-133K02.b_129_1123

seq1  TGCTGATTTATGTTTGGTGACTCTTCTTTTTTATTTTAAGATTTATTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGATTTATGTTTGGTGACTCTTCTTTTTTATTTTAAGATTTATTTAT  50

seq1  TATATGTAAGCAACTGTAGCTGTCTTGAGACACTTTTCTTTCTCTCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTAAGCAACTGTAGCTGTCTTGAGACACTTTTCTTTCTCTCTCCA  100

seq1  GCCCTGCTCACTCTAGCCCAAAGATTTATTTATTATTATATGTAAGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGCTCACTCTAGCCCAAAGATTTATTTATTATTATATGTAAGTGCA  150

seq1  CTGTAGTTGTCTTCAGACACCACAGAAAAGGGCATCAGATCTCACTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTTGTCTTCAGACACCACAGAAAAGGGCATCAGATCTCACTATGG  200

seq1  ATTATTATGAGCCACCATGTGGTTACTGGGATTTGAACTCAGGACCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATGAGCCACCATGTGGTTACTGGGATTTGAACTCAGGACCTTCA  250

seq1  GAATAGCAGTCAGTGCTCTTAACCACTGAGCCCTCTCTCCAGTCGATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCAGTCAGTGCTCTTAACCACTGAGCCCTCTCTCCAGTCGATTGG  300

seq1  TGACTCTTTTGAACAGGACTATTGGTATCATGACAATGGAGATTGGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTTTGAACAGGACTATTGGTATCATGACAATGGAGATTGGAATT  350

seq1  GCCCCAAAGAACTTCTAAACAGATCCACATACCCTTATCCTATTTACCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAAAGAACTTCTAAACAGATCCACATACCCTTATCCTATTTACCAT  400

seq1  CTTTTCTCCCCTACCTTTGGACAGTGGACTAGAAGAGGAGGGGGATCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCCCCTACCTTTGGACAGTGGACTAGAAGAGGAGGGGGATCAAA  450

seq1  GCTTTTGAGAACCTTATTAAAGTAGGTTTTGAAAACTCAGCCTACACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGAGAACCTTATTAAAGTAGGTTTTGAAAACTCAGCCTACACATT  500

seq1  AGTAATTACAAGAAGCATGTTCATCTTTTAAGCATCATTCTCTATATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATTACAAGAAGCATGTTCATCTTTTAAGCATCATTCTCTATATCAT  550

seq1  CATAGTAACTCTTTGAGGTGGGTATTATTATAATCTGGTTTTTACTTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAACTCTTTGAGGTGGGTATTATTATAATCTGGTTTTTACTTAGG  600

seq1  GAAACTGAAGCACAACGTCTATGTTTTCCCAGGTATTATAAGACTCTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGAAGCACAACGTCTATGTTTTCCCAGGTATTATAAGACTCTGGG  650

seq1  ACCCCCTGAGTGAACCACGTGGAGCTAGAATCGATGCAAAGGCAAGAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTGAGTGAACCACGTGGAGCTAGAATCGATGCAAAGGCAAGAAGA  700

seq1  ATTTTATTTCATCCAGCATGCTGGGGTCACCCTGCACATAGGGAGAGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTCATCCAGCATGCTGGGGTCACCCTGCACATAGGGAGAGAGT  750

seq1  GACCCCGTGCAGCCCATCCAGCGAGCTTTTATGCAGTTCTCAGGGCCACC  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GACCCCGTGCAGCCCATCCAGCGAGCTTTTATGCAGTTCTCA-GGCCACC  799

seq1  GCCATTAGGCACAATATGATTGGCAGAACAGTGTGACTTTTAAACTGATT  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCCATTAGGCACAATATGATTGGCAGAACAGTGTGACTTTTAAACTGA-T  848

seq1  GGTCTATAGGGAGTGAGGTAGGTGGCCAATGGTCTCAGAATGTGTCTACA  900
      ||||||||||||||||||||||||||| |||||||||| |||||||||| 
seq2  GGTCTATAGGGAGTGAGGTAGGTGGCC-ATGGTCTCAG-ATGTGTCTAC-  895

seq1  AGCTCTGATGATTGGTCCCTCCTTCCTGTGGTCTGAGGAATGTAATTAGC  950
      ||||||||||| |||| |||| |  ||||||||||||  |||||||||| 
seq2  AGCTCTGATGA-TGGT-CCTCGT--CTGTGGTCTGAG--ATGTAATTAGT  939

seq1  CCCTCCCTTCCAGAGGGGAGGGGTGCCTATGTTCTTTATGGCCTTTCGTC  1000
      |||| |||| ||||||||||||||| ||||||   ||||||||||||| |
seq2  CCCT-CCTTTCAGAGGGGAGGGGTG-CTATGT--CTTATGGCCTTTCG-C  984

seq1  TTCAAGAGGGGA  1012
      ||| ||||||||
seq2  TTC-AGAGGGGA  995