BAC Information

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BAC

Clone NameB6Ng01-134A14
Chromosome2 (Build37)
Map Location 61,529,967 - 61,635,987
singlet/doubletdoublet
Overlap genePsmd14
Upstream geneRbms1, ENSMUSG00000075325, Tank
Downstream geneTbr1, LOC100039274, Slc4a10, Dpp4, Gcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134A14.bB6Ng01-134A14.g
ACCDH934435DH934436
length4711,162
definitionDH934435|Mus musculus domesticus DNA, BAC clone: B6Ng01-134A14, 5' end.DH934436|Mus musculus domesticus DNA, BAC clone: B6Ng01-134A14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,529,967 - 61,530,443)(61,634,803 - 61,635,987)
sequence
aggagtgaaggttaaatttcattgggctgtttatttaaaatacagaggtt
catctgcctagtttgaaaaggggaatatatagcccattttacaaagagtt
taaagaactagtaattctttaggtttttatatttgattgtgtatatgggg
gtgggcggtgggggatgtttgtacgcgcgcacctaaggagtccagaagaa
ggcataggatcctctggatctagagttataggtagtgagctgccaaatgt
ggattctgcaaacacaattctggtcctctgaataagcagtatgcactctt
aaccattgagccatcttaccagtctcagttctctctcttttgtttgtttg
tttgtttgtttgtttgttttttccgagacagggtttctctgtgtagccct
ggttgtcctggaactcactctgtagagcaggctggcctgaaactcagaaa
ttctcctgcctctgcctccca
gaattctaaactttttcagggaatcagctatacagtaacaaaaatatacc
tgtaaaaatggctacatgaagaaattctgtaggagtactactacctacct
attgaaaaatgcagttattaaataaaaaaagaaaatggttattaaataaa
taaataaataaatcttccacatccttattattttattccaactatagtaa
aattagattgggcccgaggcccctgtaacttgtttagtaattgttttcac
tacgacagcacgtcatcggttgagagtcatgatttagtctccacaagcag
caaagagaatttggcatcaagtaaatatagtagcctttaaagtttagtat
gatcaaataacagaagaaatgtaatatacacaaacaagaaaaaatgatga
tccctaaaatagttttatagttacgagagagagcatgtcagcacgagact
gtgtaaccctttagtctcctcacctgcttgccaacattctttattgccag
ctgttcaggtgtcatcttatcttcttcttccacagcctatgtatgaacac
aaagggcagagtttcaaattctgaatttacttttcccactgaagaataat
caccgaagcaaggtgaccataatctccattcagaaccctttctattcaag
caatttgctggaaaagtaattttgtttcaatccagaacaatcttcagggt
aatgaaaactatttatcaccaccatttagaaacatgtaagaaaatataaa
cagtagcagaaaataagcactggctcactaaatggccctgagagatgagg
agatgggagtacaaggaatccttctgtgcctaattcccctctcttctttc
cacctcccaacagcttccttctccacgtccccatttctccttcatgtctg
tagtctgtgtctatctagtagctacttaatatcattaaggaccaaaaaga
gctgcggagttttgatctatacatacattataagttaatctcgacacatc
tttaattttctacagtatacatttagaaaaaaatcacaattccacatgag
taccataaaaggtttcagttttagcatcagttattacataaattagatca
attaaagactgaaccatttttatcacttagagtacccaattcttgtgtct
agtctagctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_61529967_61530443
seq2: B6Ng01-134A14.b_43_519

seq1  GAATTCAGGAGTGAAGGTTAAATTTCATTGGGCTGTTTATTTAAAATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGTGAAGGTTAAATTTCATTGGGCTGTTTATTTAAAATACA  50

seq1  GAGGTTCATCTGCCTAGTTTGAAAAGGGGAATATATAGCCCATTTTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCATCTGCCTAGTTTGAAAAGGGGAATATATAGCCCATTTTACAA  100

seq1  AGAGTTTAAAGAACTAGTAATTCTTTAGGTTTTTATATTTGATTGTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTAAAGAACTAGTAATTCTTTAGGTTTTTATATTTGATTGTGTAT  150

seq1  ATGGGGGTGGGCGGTGGGGGATGTTTGTACGCGCGCACCTAAGGAGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGGTGGGCGGTGGGGGATGTTTGTACGCGCGCACCTAAGGAGTCCA  200

seq1  GAAGAAGGCATAGGATCCTCTGGATCTAGAGTTATAGGTAGTGAGCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGGCATAGGATCCTCTGGATCTAGAGTTATAGGTAGTGAGCTGCC  250

seq1  AAATGTGGATTCTGCAAACACAATTCTGGTCCTCTGAATAAGCAGTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGGATTCTGCAAACACAATTCTGGTCCTCTGAATAAGCAGTATGC  300

seq1  ACTCTTAACCATTGAGCCATCTTACCAGTCTCAGTTCTCTCTCTTTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTAACCATTGAGCCATCTTACCAGTCTCAGTTCTCTCTCTTTTGTT  350

seq1  TGTTTGTTTGTTTGTTTGTTTGTTTTTTCCGAGACAGGGTTTCTCTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTGTTTGTTTTTTCCGAGACAGGGTTTCTCTGTGT  400

seq1  AGCCCTGGCTGTCCTGGAACTCACTCTGTAGAGCAGGCTGGCCTGAAACT  450
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGTTGTCCTGGAACTCACTCTGTAGAGCAGGCTGGCCTGAAACT  450

seq1  CAGAAATTCGCCTGCCTCTGCCTCCCA  477
      ||||||||| |||||||||||||||||
seq2  CAGAAATTCTCCTGCCTCTGCCTCCCA  477

seq1: chr2_61634803_61635987
seq2: B6Ng01-134A14.g_65_1226 (reverse)

seq1  GAGAGCTTAGACTAGACACAAGAATTTGTGGGTAACTCTAAAGTAGTAAA  50
      |||||| ||||||||||||||||||   ||||| ||||| ||||  ||||
seq2  GAGAGC-TAGACTAGACACAAGAAT---TGGGT-ACTCT-AAGTGATAAA  44

seq1  AATGGTTTTCATGTTCTTTTAATTTGGTTTTTAATTTATGTAATTAACTT  100
      |||||  |||| ||   |||||||     | |||||||||||| |||| |
seq2  AATGG--TTCA-GT--CTTTAATT---GATCTAATTTATGTAA-TAAC-T  84

seq1  GATGCTAAAAACTTGAAACTTTTTATGGTTACTTCATGTGGAATTGTGAT  150
      ||||||||||   |||||| |||||||| ||| |||||||||||||||| 
seq2  GATGCTAAAA--CTGAAACCTTTTATGG-TAC-TCATGTGGAATTGTGA-  129

seq1  TTTTTTTCTAAATGTATACTGTAGAGATTTAAAGATGTGTCGAGATTAAC  200
      ||||||||||||||||||||||||| | ||||||||||||||||||||||
seq2  TTTTTTTCTAAATGTATACTGTAGAAAATTAAAGATGTGTCGAGATTAAC  179

seq1  TTATAATGTATGTATTAGATCAAAACTCCGCAGCTCTTTTTGGTCCTTAA  250
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTATAATGTATGTA-TAGATCAAAACTCCGCAGCTCTTTTTGGTCCTTAA  228

seq1  TGATATTAAGTAGCTACTAGATAGACACAGACTACAGACATGAAGGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTAAGTAGCTACTAGATAGACACAGACTACAGACATGAAGGAGAA  278

seq1  ATGGGGACGTGGAGAAGGAAGCTGTTGGGAGGTGGGAAGGAAGAGAGGGG  350
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  ATGGGGACGTGGAGAAGGAAGCTGTTGGGAGGT-GGAAAGAAGAGAGGGG  327

seq1  AATTAGGCACAGAAGGATTCCTTGTACTCCCATCTCCTCATCTCTCAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGCACAGAAGGATTCCTTGTACTCCCATCTCCTCATCTCTCAGGG  377

seq1  CCATTTAGTGAGCCAGTGCTTATTTTCTGCTACTGTTTATATTTTCTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTAGTGAGCCAGTGCTTATTTTCTGCTACTGTTTATATTTTCTTAC  427

seq1  ATGTTTCTAAATGGTGGTGATAAATAGTTTTCATTACCCTGAAGATTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCTAAATGGTGGTGATAAATAGTTTTCATTACCCTGAAGATTGTT  477

seq1  CTGGATTGAAACAAAATTACTTTTCCAGCAAATTGCTTGAATAGAAAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTGAAACAAAATTACTTTTCCAGCAAATTGCTTGAATAGAAAGGG  527

seq1  TTCTGAATGGAGATTATGGTCACCTTGCTTCGGTGATTATTCTTCAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAATGGAGATTATGGTCACCTTGCTTCGGTGATTATTCTTCAGTGG  577

seq1  GAAAAGTAAATTCAGAATTTGAAACTCTGCCCTTTGTGTTCATACATAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTAAATTCAGAATTTGAAACTCTGCCCTTTGTGTTCATACATAGG  627

seq1  CTGTGGAAGAAGAAGATAAGATGACACCTGAACAGCTGGCAATAAAGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGAAGAAGAAGATAAGATGACACCTGAACAGCTGGCAATAAAGAAT  677

seq1  GTTGGCAAGCAGGTGAGGAGACTAAAGGGTTACACAGTCTCGTGCTGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCAAGCAGGTGAGGAGACTAAAGGGTTACACAGTCTCGTGCTGACA  727

seq1  TGCTCTCTCTCGTAACTATAAAACTATTTTAGGGATCATCATTTTTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTCTCGTAACTATAAAACTATTTTAGGGATCATCATTTTTTCTT  777

seq1  GTTTGTGTATATTACATTTCTTCTGTTATTTGATCATACTAAACTTTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGTATATTACATTTCTTCTGTTATTTGATCATACTAAACTTTAAA  827

seq1  GGCTACTATATTTACTTGATGCCAAATTCTCTTTGCTGCTTGTGGAGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACTATATTTACTTGATGCCAAATTCTCTTTGCTGCTTGTGGAGACT  877

seq1  AAATCATGACTCTCAACCGATGACGTGCTGTCGTAGTGAAAACAATTACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGACTCTCAACCGATGACGTGCTGTCGTAGTGAAAACAATTACT  927

seq1  AAACAAGTTACAGGGGCCTCGGGCCCAATCTAATTTTACTATAGTTGGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGTTACAGGGGCCTCGGGCCCAATCTAATTTTACTATAGTTGGAA  977

seq1  TAAAATAATAAGGATGTGGAAGATTTATTTATTTATTTATTTAATAACCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAATAAGGATGTGGAAGATTTATTTATTTATTTATTTAATAACCA  1027

seq1  TTTTCTTTTTTTATTTAATAACTGCATTTTTCAATAGGTAGGTAGTAGTA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTTATTTAATAACTGCATTTTTCAATAGGTAGGTAGTAGTA  1077

seq1  CTCCTACAGAATTTCTTCATGTAGCCATTTTTACAGGTATATTTTTGTTA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACAGAATTTCTTCATGTAGCCATTTTTACAGGTATATTTTTGTTA  1127

seq1  CTGTATAGCTGATTCCCTGAAAAAGTTTAGAATTC  1185
      |||||||||||||||||||||||||||||||||||
seq2  CTGTATAGCTGATTCCCTGAAAAAGTTTAGAATTC  1162