BAC Information

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BAC

Clone NameB6Ng01-134E21
Chromosome2 (Build37)
Map Location 170,676,528 - 170,810,841
singlet/doubletdoublet
Overlap geneDok5, LOC668955
Upstream geneTshz2, LOC100043737, LOC100043910, Zfp217, Silg111, LOC100043739, Bcas1, LOC228916, Cyp24a1, Pfdn4, 4930470P17Rik
Downstream geneLOC100043743, LOC100043744
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134E21.bB6Ng01-134E21.g
ACCDH934637DH934638
length1,0021,184
definitionDH934637|Mus musculus domesticus DNA, BAC clone: B6Ng01-134E21, 5' end.DH934638|Mus musculus domesticus DNA, BAC clone: B6Ng01-134E21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(170,676,528 - 170,677,536)(170,809,657 - 170,810,841)
sequence
gaattcctgtggaggtcaagttacaggagttggttttcttcccttactga
gtggttcccagggaacaaacagactctggtcagcaggttttgcagcaagc
tcctttactcgctgacccagctagttgcccccttcaacgtgaaatgtgta
gaatctattcttaggatactggagtttctcttgcaggctataaatagatc
cctgacctgactccagctctgaaccatagtccttgggcgttacatacata
tgtacttacttaataatcctttctctccaacccatgcttcccctgttaag
aacttaccacaggcaaaagcacacaactcaagcacccattagttaaatct
gaggctccgaagaagttaatcagaatccgtcactttagagacaccaaagg
catcactctagggacatcattcagaagaggttctagcctatgggcaacct
ggtgggaaaaggctttgtcttgcatagctttgggccatggccagcagctg
attgccagcacgctgtggacagggcctttggagttagagctatgatggtt
gtcatcagatattaaggtttcaacatcactggggtgatccagttcagggc
gtctgtagaactggaaattggctatttaatgggtttctagccaagtattt
accaatctgtccaagcatgaaatgcaagtcctgctccactatgtcgctgt
cctggaaggtgaaatgttatcgtctggcttccgtacaggaaacactgatt
gatgtcccgagtgtcagaccagggactgggttaagatgactgaaggccat
acagaggttttgtgagctgacatatacaagccagtttttgtttgatttgc
tggctattgcctgagatgatagttttggtttgtttgttgcttgtttgttg
ttttattagaattgttctagggtttatcctggggaaatcacaagaacaga
gatgggtatcttttacaatgattgaacaactgatgatgatgaatatgggg
cc
gaattctggggcccatgatcatgtttttttattaaaaaacaaaacaaaac
aaaactgcatgcatcctgtcatgtaaccccgagtctcccattcccctact
gtatttaagaaaggaagcagccatgttggaaagcatacacagtaggcaca
cataagtagcctcaaggagcttgaatggcctacaaatgacccctagcaaa
aagctgcaattcttagcctcccaaccgcaaaatgggctctgtcaaggacg
tgaatctggaaatggagcctcccacagcagagcttcccctccggtcacca
gccaggttaacactttaatgacagctttgcagaagacccagctagtctga
gacttgtgaggcacaaaagccataagatcacaagccacctaccacacagt
gaattcgcagacagggaaagaggatgcatttcagaacctgcccagcactt
ggattgtccccttcacttctgcaccccttcctctgcctacgcatcccagc
tgtggagttttggaggagctaaagaaaagctaagttcatctcttaggtta
tcctagtctgccccactaaggtgtctttgttcttgttcgtccatctgacg
catcaagcatggcttacagtttgcagcttcgttgagctatgatttacatc
ttccagaaaccacaacttttttggagtggcagaaattgcttagctttgtt
tacaactgttttcaaaacccacaatttagaaaacctcagaaaattctact
ttgaactgtttctcccgggtagaaaacccatagatcaaataaagaattca
agagggacagggctgctcactgtggtggccaggatggcccagcatgtgtc
agtgtagagatgtcagaagacagactgcaggcagaaaatgcttggctttt
gcactgtcagtgacttgagaaaatgacttttctctagccttgggccatta
tctgaaagatggggaaatggaaatttcctaccacggggggaatgtttcca
gtgaataatgtcagctacctccttgggacctgcttcagtacctagttatg
caatggacccagccagaagctggagtccataaatggaattataataaata
tcgttgaaatatagagcttatgttatcgaatacggaggtaccaagttatt
ctcacttactcattggtcagagcctaaagggtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_170676528_170677536
seq2: B6Ng01-134E21.b_46_1047

seq1  GAATTCCTGTGGAGGTCAAGTTACAGGAGTTGGTTTTCTTCCCTTACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTGGAGGTCAAGTTACAGGAGTTGGTTTTCTTCCCTTACTGA  50

seq1  GTGGTTCCCAGGGAACAAACAGACTCTGGTCAGCAGGTTTTGCAGCAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTCCCAGGGAACAAACAGACTCTGGTCAGCAGGTTTTGCAGCAAGC  100

seq1  TCCTTTACTCGCTGACCCAGCTAGTTGCCCCCTTCAACGTGAAATGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTACTCGCTGACCCAGCTAGTTGCCCCCTTCAACGTGAAATGTGTA  150

seq1  GAATCTATTCTTAGGATACTGGAGTTTCTCTTGCAGGCTATAAATAGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTATTCTTAGGATACTGGAGTTTCTCTTGCAGGCTATAAATAGATC  200

seq1  CCTGACCTGACTCCAGCTCTGAACCATAGTCCTTGGGCGTTACATACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTGACTCCAGCTCTGAACCATAGTCCTTGGGCGTTACATACATA  250

seq1  TGTACTTACTTAATAATCCTTTCTCTCCAACCCATGCTTCCCCTGTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTACTTAATAATCCTTTCTCTCCAACCCATGCTTCCCCTGTTAAG  300

seq1  AACTTACCACAGGCAAAAGCACACAACTCAAGCACCCATTAGTTAAATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTACCACAGGCAAAAGCACACAACTCAAGCACCCATTAGTTAAATCT  350

seq1  GAGGCTCCGAAGAAGTTAATCAGAATCCGTCACTTTAGAGACACCAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCCGAAGAAGTTAATCAGAATCCGTCACTTTAGAGACACCAAAGG  400

seq1  CATCACTCTAGGGACATCATTCAGAAGAGGTTCTAGCCTATGGGCAACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTCTAGGGACATCATTCAGAAGAGGTTCTAGCCTATGGGCAACCT  450

seq1  GGTGGGAAAAGGCTTTGTCTTGCATAGCTTTGGGCCATGGCCAGCAGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGAAAAGGCTTTGTCTTGCATAGCTTTGGGCCATGGCCAGCAGCTG  500

seq1  ATTGCCAGCACGCTGTGGACAGGGCCTTTGGAGTTAGAGCTATGATGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCAGCACGCTGTGGACAGGGCCTTTGGAGTTAGAGCTATGATGGTT  550

seq1  GTCATCAGATATTAAGGTTTCAACATCACTGGGGTGATCCAGTTCAGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAGATATTAAGGTTTCAACATCACTGGGGTGATCCAGTTCAGGGC  600

seq1  GTCTGTAGAACTGGAAATTGGCTATTTAATGGGTTTCTAGCCAAGTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTAGAACTGGAAATTGGCTATTTAATGGGTTTCTAGCCAAGTATTT  650

seq1  ACCAATCTGTCCAAGCATGAAATGCAAGTCCTGCTCCACTATGTCGCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCTGTCCAAGCATGAAATGCAAGTCCTGCTCCACTATGTCGCTGT  700

seq1  CCTGGAAGGTGAAATGTTATCGTCTGGCTTCCGTACAGGAAACACTGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAAGGTGAAATGTTATCGTCTGGCTTCCGTACAGGAAACACTGATT  750

seq1  GATGTCCCGAGTGTCAGACCAGGGACTGGGTTAAGATGACTGAAGGCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCCCGAGTGTCAGACCAGGGACTGGGTTAAGATGACTGAAGGCCAT  800

seq1  ACAGAGGTTTTGTGAGCTGACATATACAAGCCAGTTTTTGTTTGATTTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGTTTTGTGAGCTGACATATACAAGCCAGTTTTTGTTTGATTTGC  850

seq1  TGGCTATTGGCTGAGATGATAGGTTTTGGTTTGTTTGTTTGTTTGTTTGT  900
      ||||||||| ||||||||||| ||||||||||||||| ||| ||||||| 
seq2  TGGCTATTGCCTGAGATGATA-GTTTTGGTTTGTTTG-TTGCTTGTTTG-  897

seq1  TTGTTTTAATTAGAATTGTTTCTAGTGTTTATCCTGGTGAAATCCACAAG  950
      ||||||| |||||||||| |||||| ||||||||||| ||||| ||||||
seq2  TTGTTTT-ATTAGAATTG-TTCTAGGGTTTATCCTGGGGAAAT-CACAAG  944

seq1  AAACAGAGATGGCTACTTTTTACAAAGTAGGAACATCTGATGATGATGAA  1000
       ||||||||||| ||  |||||||| |   ||||| ||||||||||||||
seq2  -AACAGAGATGGGTATCTTTTACAATGATTGAACAACTGATGATGATGAA  993

seq1  TATGGGGCC  1009
      |||||||||
seq2  TATGGGGCC  1002

seq1: chr2_170809657_170810841
seq2: B6Ng01-134E21.g_68_1251 (reverse)

seq1  TAACCCTTTAGTGCTGTGACCCAATGAGTAAGT-AGAATAAATTTGTTAC  49
      ||||||||||| ||| ||| ||||||||||||| ||||| || ||| |||
seq2  TAACCCTTTAG-GCTCTGA-CCAATGAGTAAGTGAGAAT-AACTTGGTAC  47

seq1  TTCCGTATCTGAT-ACAT-AGCTCTTATTTTTTAAACGTATTTTTATTAT  97
       |||||||  ||| |||| ||||||   | ||| |||| || ||||||||
seq2  CTCCGTATTCGATAACATAAGCTCT--ATATTTCAACG-ATATTTATTAT  94

seq1  TATT-CATTTATGGACTCCAGCTTCTTGCTGGGTTCATTGCAT-ACTAGG  145
       ||| ||||||||||||||||||||| ||||||| |||||||| ||||||
seq2  AATTCCATTTATGGACTCCAGCTTCTGGCTGGGTCCATTGCATAACTAGG  144

seq1  TACTGAAGCAGGTCCCAAGAGGTTAGCTGACATTATTTCACTGGAAACAT  195
      |||||||||||||||||||  | |||||||||||| ||||||||||||||
seq2  TACTGAAGCAGGTCCCAAGGAGGTAGCTGACATTA-TTCACTGGAAACAT  193

seq1  T-CCCCCGTGGTAGGAATTATCCATTTCCCCATCTTTCAGATAATTGGCC  244
      | ||||||||||||||| | |||||||||||||||||||||||| |||||
seq2  TCCCCCCGTGGTAGGAAATTTCCATTTCCCCATCTTTCAGATAA-TGGCC  242

seq1  CAAGGCTAGAGAAAAGTCATTTTCTCAAGTCACTGACAGTGCAAAAGCCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTAGAGAAAAGTCATTTTCTCAAGTCACTGACAGTGCAAAAGCCA  292

seq1  AGCATTTTCTGCCTGCAGTCTGTCTTCTGACATCTCTACACTGACACATG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCTGCCTGCAGTCTGTCTTCTGACATCTCTACACTGACACATG  342

seq1  CTGGGCCATCCTGGCCACCACAGTGAGCAGCCCTGTCCCTCTTGAATTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCATCCTGGCCACCACAGTGAGCAGCCCTGTCCCTCTTGAATTCT  392

seq1  TTATTTGATCTATGGGTTTTCTA-CCGGGAGAAACAGTTCAAAGTAGAAT  443
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTATTTGATCTATGGGTTTTCTACCCGGGAGAAACAGTTCAAAGTAGAAT  442

seq1  TTTCTGAGGTTTTCTAAATTGTGGGTTTTGAAAACAGTTGTAAACAAAGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGGTTTTCTAAATTGTGGGTTTTGAAAACAGTTGTAAACAAAGC  492

seq1  TAAGCAATTTCTGCCACTCCAAAAAAGTTGTGGTTTCTGGAAGATGTAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAATTTCTGCCACTCCAAAAAAGTTGTGGTTTCTGGAAGATGTAAA  542

seq1  TCATAGCTCAACGAAGCTGCAAACTGTAAGCCATGCTTGATGCGTCAGAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCTCAACGAAGCTGCAAACTGTAAGCCATGCTTGATGCGTCAGAT  592

seq1  GGACGAACAAGAACAAAGACACCTTAGTGGGGCAGACTAGGATAACCTAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAACAAGAACAAAGACACCTTAGTGGGGCAGACTAGGATAACCTAA  642

seq1  GAGATGAACTTAGCTTTTCTTTAGCTCCTCCAAAACTCCACAGCTGGGAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAACTTAGCTTTTCTTTAGCTCCTCCAAAACTCCACAGCTGGGAT  692

seq1  GCGTAGGCAGAGGAAGGGGTGCAGAAGTGAAGGGGACAATCCAAGTGCTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTAGGCAGAGGAAGGGGTGCAGAAGTGAAGGGGACAATCCAAGTGCTG  742

seq1  GGCAGGTTCTGAAATGCATCCTCTTTCCCTGTCTGCGAATTCACTGTGTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTTCTGAAATGCATCCTCTTTCCCTGTCTGCGAATTCACTGTGTG  792

seq1  GTAGGTGGCTTGTGATCTTATGGCTTTTGTGCCTCACAAGTCTCAGACTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGCTTGTGATCTTATGGCTTTTGTGCCTCACAAGTCTCAGACTA  842

seq1  GCTGGGTCTTCTGCAAAGCTGTCATTAAAGTGTTAACCTGGCTGGTGACC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTCTTCTGCAAAGCTGTCATTAAAGTGTTAACCTGGCTGGTGACC  892

seq1  GGAGGGGAAGCTCTGCTGTGGGAGGCTCCATTTCCAGATTCACGTCCTTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGAAGCTCTGCTGTGGGAGGCTCCATTTCCAGATTCACGTCCTTG  942

seq1  ACAGAGCCCATTTTGCGGTTGGGAGGCTAAGAATTGCAGCTTTTTGCTAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGCCCATTTTGCGGTTGGGAGGCTAAGAATTGCAGCTTTTTGCTAG  992

seq1  GGGTCATTTGTAGGCCATTCAAGCTCCTTGAGGCTACTTATGTGTGCCTA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATTTGTAGGCCATTCAAGCTCCTTGAGGCTACTTATGTGTGCCTA  1042

seq1  CTGTGTATGCTTTCCAACATGGCTGCTTCCTTTCTTAAATACAGTAGGGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATGCTTTCCAACATGGCTGCTTCCTTTCTTAAATACAGTAGGGG  1092

seq1  AATGGGAGACTCGGGGTTACATGACAGGATGCATGCAGTTTTGTTTTGTT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGAGACTCGGGGTTACATGACAGGATGCATGCAGTTTTGTTTTGTT  1142

seq1  TTGTTTTTTAATAAAAAAACATGATCATGGGCCCCAGAATTC  1185
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTAATAAAAAAACATGATCATGGGCCCCAGAATTC  1184