BAC Information

Click to search

BAC

Clone NameB6Ng01-134G16
Chromosome2 (Build37)
Map Location 139,983,093 - 140,104,148
singlet/doubletdoublet
Overlap geneEsf1, 2310003L22Rik, Sel1l2
Upstream geneLOC628103, C130053K05Rik, LOC100043792, 5430433G21Rik, Tasp1, LOC672103, LOC269365
Downstream gene2900006F19Rik, Flrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134G16.bB6Ng01-134G16.g
ACCDH934719DH934720
length958445
definitionDH934719|Mus musculus domesticus DNA, BAC clone: B6Ng01-134G16, 5' end.DH934720|Mus musculus domesticus DNA, BAC clone: B6Ng01-134G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(140,103,576 - 140,104,148)(139,983,093 - 139,983,543)
sequence
gaattctctgtttagctctgttccccatttttataataaggttttgtcca
accctttcttgctcagatctcttgtgttcccaatcctttcctcaccaagc
ttcttgcctttcttgtttttctgctttctctctcactgttcattgaagta
agtacactgagaagtagccgtaccatagcccaaatgctatcctgacataa
gattttatcaaacaaacaaactagtttatcattatttttaatttagtgtc
atccaagtacagaatatgacaaagatgaagccaaaatataacataattgc
tctctaatgtataaccgaatgcactctgcatcctgggcttccacatcccc
cccccccccaggatggctcactaagctctgcttttagggtttctctagca
caagtttctaaactcttcgacattcctcccacaaaccaattctaaaagac
cgtaagcgacatagtcaggtttactatgtcaacagcctcacagatcaata
cacgttttctgtatcagctactttatttgtttctgtggcaaaatatttga
caaagcaacttaaagaaggcttttctgttgtgtcaccgcttgaggtccca
tgatggcagggaagtcagacagcaggccatgagacaactagccacactgt
gttcatagtcaggaggcaaagagatggatggccattgatgttcagcttgc
tcttttcctttttgtcagtccagaaccctagcctgtgggatggtaccacc
cacagtcaggaacaggatggggcttcaccctttagttaaacctgtctgaa
cactctatcaacagaaacacccagagatatgtttccatggtgatactaaa
tctagcaagttgaaaatcaagattaagtcatcatattgaccttgaagagt
tctctctgttttgttttttttttttttatttccagatcttagcttcattt
cactatga
tataaaaagagactttgcatttggaactactagttaatgtaagccagttt
ccaaaacccaggtgcaatatatatataaaatcattggctcactgcagaat
cctaagatcaaacagaactaatactggataagtagtctaaataaaataca
gagtaccataaatgcaaaaggccactgaaaataaagaaaagtttaaaggc
tgatcaagaataatcttagccaacaaatttatttcacaaatgactggtct
ttgcatgtaagtcagccatggtgactgacaagttttaggcatcaggccat
ggaatgtggaatggaaagtgaggtaaatacaatctttggttattataatc
agcttttataatttacatggagaatattccacacgcatgtaaaatgcatc
tattatatattttatagagagttatggggaggggagtattggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_140103576_140104148
seq2: B6Ng01-134G16.b_43_615 (reverse)

seq1  AAAGCCTTCTTTAAGTTGCTTTGTCAAATATTTTGCCACAGAAACAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTCTTTAAGTTGCTTTGTCAAATATTTTGCCACAGAAACAAATA  50

seq1  AAGTAGCTGATACAGAAAACGTGTATTGATCTGTGAGGCTGTTGACATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCTGATACAGAAAACGTGTATTGATCTGTGAGGCTGTTGACATAG  100

seq1  TAAACCTGACTATGTCGCTTACGGTCTTTTAGAATTGGTTTGTGGGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTGACTATGTCGCTTACGGTCTTTTAGAATTGGTTTGTGGGAGGA  150

seq1  ATGTCGAAGAGTTTAGAAACTTGTGCTAGAGAAACCCTAAAAGCAGAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCGAAGAGTTTAGAAACTTGTGCTAGAGAAACCCTAAAAGCAGAGCT  200

seq1  TAGTGAGCCATCCTGGGGGGGGGGGGGATGTGGAAGCCCAGGATGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGCCATCCTGGGGGGGGGGGGGATGTGGAAGCCCAGGATGCAGAG  250

seq1  TGCATTCGGTTATACATTAGAGAGCAATTATGTTATATTTTGGCTTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCGGTTATACATTAGAGAGCAATTATGTTATATTTTGGCTTCATC  300

seq1  TTTGTCATATTCTGTACTTGGATGACACTAAATTAAAAATAATGATAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCATATTCTGTACTTGGATGACACTAAATTAAAAATAATGATAAAC  350

seq1  TAGTTTGTTTGTTTGATAAAATCTTATGTCAGGATAGCATTTGGGCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTGTTTGTTTGATAAAATCTTATGTCAGGATAGCATTTGGGCTATG  400

seq1  GTACGGCTACTTCTCAGTGTACTTACTTCAATGAACAGTGAGAGAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACGGCTACTTCTCAGTGTACTTACTTCAATGAACAGTGAGAGAGAAAG  450

seq1  CAGAAAAACAAGAAAGGCAAGAAGCTTGGTGAGGAAAGGATTGGGAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAACAAGAAAGGCAAGAAGCTTGGTGAGGAAAGGATTGGGAACAC  500

seq1  AAGAGATCTGAGCAAGAAAGGGTTGGACAAAACCTTATTATAAAAATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATCTGAGCAAGAAAGGGTTGGACAAAACCTTATTATAAAAATGGG  550

seq1  GAACAGAGCTAAACAGAGAATTC  573
      |||||||||||||||||||||||
seq2  GAACAGAGCTAAACAGAGAATTC  573

seq1: chr2_139983093_139983543
seq2: B6Ng01-134G16.g_68_518

seq1  GAATTCTATAAAAAGAGACTTTGCATTTGGAACTACTAGTTAATGTAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAAAAAGAGACTTTGCATTTGGAACTACTAGTTAATGTAAGC  50

seq1  CAGTTTCCAAAACCCAGGTGCAATATATATATAAAATCATTGGCTCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCAAAACCCAGGTGCAATATATATATAAAATCATTGGCTCACTG  100

seq1  CAGAATCCTAAGATCAAACAGAACTAATACTGGATAAGTAGTCTAAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCCTAAGATCAAACAGAACTAATACTGGATAAGTAGTCTAAATAA  150

seq1  AATACAGAGTACCATAAATGCAAAAGGCCACTGAAAATAAAGAAAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAGAGTACCATAAATGCAAAAGGCCACTGAAAATAAAGAAAAGTTT  200

seq1  AAAGGCTGATCAAGAATAATCTTAGCCAACAAATTTATTTCACAAATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGATCAAGAATAATCTTAGCCAACAAATTTATTTCACAAATGAC  250

seq1  TGGTCTTTGCATGTAAGTCAGCCATGGTGACTGACAAGTTTTAGGCATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTTTGCATGTAAGTCAGCCATGGTGACTGACAAGTTTTAGGCATCA  300

seq1  GGCCATGGAATGTGGAATGGAAAGTGAGGTAAATACAATCTTTGGTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGGAATGTGGAATGGAAAGTGAGGTAAATACAATCTTTGGTTATT  350

seq1  ATAATCAGCTTTTATAATTTACATGGAGAATATTCCACACGCATGTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAGCTTTTATAATTTACATGGAGAATATTCCACACGCATGTAAAA  400

seq1  TGCATCTATTATATATTTTATAGAGAGTTATGGGGAGGGGAGTATTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCTATTATATATTTTATAGAGAGTTATGGGGAGGGGAGTATTGGAG  450

seq1  A  451
      |
seq2  A  451