BAC Information

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BAC

Clone NameB6Ng01-134H23
Chromosome2 (Build37)
Map Location 57,154,645 - 57,306,972
singlet/doubletdoublet
Overlap geneGpd2, LOC271788
Upstream geneLOC227920, Nr4a2, LOC100041900, LOC100042910
Downstream geneGalnt5, A330104H05Rik, LOC667026, Pscdbp, LOC100042926, Acvr1c, LOC667062, Acvr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134H23.bB6Ng01-134H23.g
ACCDH934778DH934779
length1,208692
definitionDH934778|Mus musculus domesticus DNA, BAC clone: B6Ng01-134H23, 5' end.DH934779|Mus musculus domesticus DNA, BAC clone: B6Ng01-134H23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,154,645 - 57,155,856)(57,306,281 - 57,306,972)
sequence
gaattcaggttctaatgtggagtaagacaagtcttgtcttctctgaagaa
ggccctggtgagtctctgtgtttcctgatttgcctgagcagagccacttg
acaactggcccagatgcactcatgtccagtgtccatactttgactctcaa
ttctctttttaaaatattcactgtctcactatcattccctgtctatagca
cacaattaagcactggtaatggtctcatatttgagtgttgcacaactttt
ctggggtgcatgtctaagagcagtgatgtgggttgacaaacagcacttgt
gatttttctttttttctttttcttttttttgagacagggtttctctgtgt
agccctggctgtcctggaactcactctgtagaccaggctggcctcaaact
cagaaatccacctgcctctgcctcccaagtgctgggattaaagaccccca
cggccggctagcacttgtgatttttgttatttttttcccccctagtttcg
acaccgacagtgtttgatcttgaatcagacacctctacttttcaatcttc
attgtttccaaatattttgtcctttaaagtcaagagaattgctctggttt
tacggtgacatttctgttcaaatttttaactgttaactattatcagagca
accctttggcacgaaacgtctctgaactgaatgcatgcgctttctcctat
cctagctttgtgagtccaaattgttctgcctcacgttatgattgtgaatg
gacccttgacctaaccaattgcctaagggagtagtagccagctcctggac
attcccagtgctgcctgtggatggataccacaggacttgtgaacttgaag
aacctacctacggtacaacacggacttggagcactgctgctaccctgagg
cctcagagaggcagggtctctgcagaaagaaatcagaagtagattttttt
ttctccctaagagattttagtagtctttagataagggatggggtgcttgt
agaattgtacctatctttgttcagtcccatcctaagagagaaatattatt
ctttttagaaaaattcctgatttggggtttgggactggaatggaagttcc
tctcaaggaaagagtagcaagtgttcctaacataccgggccttagttttc
cagccccagaagaatggatactccggctatgacctagctggacttcactt
agattgaa
gaattctatgaatgctcgtcagtgtgagcttcaaagggcaaaactggata
gactggtttggcttagtgttttaaataaacagtaataaaaaccacaacct
tgagcagtaggactgtggacaagaagaatttagatctggctcagttaagc
acaaacagagtgatctgaccttgataccatctgggttgcagcagggtccc
agactgtctccccaagagtgacctcacccttcccaagagcgcatcggtgc
taagtatctggttgtacttccagggcttacagcttcaatggatgttccca
aatcaccacaactctaactttggtcctgcctggtccgtcacaaagcttgc
caaggtggaaatagagttcaaatgagagttggtactgagaaagtggaagt
ggctcttggcttagtctgcgctccaggaggttactagggccaaaggctag
tggaactgtgggtagaggtgccagagacagcccagcaagagccaaggcac
aggcagcaggagtaaccccagctatggccatgtgccacagggcaagctgt
ttaattcagatggataaactctgcccacagctgctgtcaccacatctgac
atttttgtcctggttcttcattgtatctcagtgtggccttttccttgtta
gtaaagaatagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_57154645_57155856
seq2: B6Ng01-134H23.b_47_1254

seq1  GAATTCAGGTTCTAATGTGGAGTAAGACAAGTCTTGTCTTCTCTGAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTTCTAATGTGGAGTAAGACAAGTCTTGTCTTCTCTGAAGAA  50

seq1  GGCCCTGGTGAGTCTCTGTGTTTCCTGATTTGCCTGAGCAGAGCCACTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGTGAGTCTCTGTGTTTCCTGATTTGCCTGAGCAGAGCCACTTG  100

seq1  ACAACTGGCCCAGATGCACTCATGTCCAGTGTCCATACTTTGACTCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGGCCCAGATGCACTCATGTCCAGTGTCCATACTTTGACTCTCAA  150

seq1  TTCTCTTTTTAAAATATTCACTGTCTCACTATCATTCCCTGTCTATAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTTTAAAATATTCACTGTCTCACTATCATTCCCTGTCTATAGCA  200

seq1  CACAATTAAGCACTGGTAATGGTCTCATATTTGAGTGTTGCACAACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTAAGCACTGGTAATGGTCTCATATTTGAGTGTTGCACAACTTTT  250

seq1  CTGGGGTGCATGTCTAAGAGCAGTGATGTGGGTTGACAAACAGCACTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTGCATGTCTAAGAGCAGTGATGTGGGTTGACAAACAGCACTTGT  300

seq1  GATTTTTCTTTTTTTCTTTTTCTTTTTTTTGAGACAGGGTTTCTCTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTCTTTTTTTCTTTTTCTTTTTTTTGAGACAGGGTTTCTCTGTGT  350

seq1  AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCAAACT  400

seq1  CAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGACCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGACCCCCA  450

seq1  CGGCCGGCTAGCACTTGTGATTTTTGTTATTTTTTTCCCCCCTAGTTTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCGGCTAGCACTTGTGATTTTTGTTATTTTTTTCCCCCCTAGTTTCG  500

seq1  ACACCGACAGTGTTTGATCTTGAATCAGACACCTCTACTTTTCAATCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGACAGTGTTTGATCTTGAATCAGACACCTCTACTTTTCAATCTTC  550

seq1  ATTGTTTCCAAATATTTTGTCCTTTAAAGTCAAGAGAATTGCTCTGGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCCAAATATTTTGTCCTTTAAAGTCAAGAGAATTGCTCTGGTTT  600

seq1  TACGGTGACATTTCTGTTCAAATTTTTAACTGTTAACTATTATCAGAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGTGACATTTCTGTTCAAATTTTTAACTGTTAACTATTATCAGAGCA  650

seq1  ACCCTTTGGCACGAAACGTCTCTGAACTGAATGCATGCGCTTTCTCCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTGGCACGAAACGTCTCTGAACTGAATGCATGCGCTTTCTCCTAT  700

seq1  CCTAGCTTTGTGAGTCCAAATTGTTCTGCCTCACGTTATGATTGTGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTTTGTGAGTCCAAATTGTTCTGCCTCACGTTATGATTGTGAATG  750

seq1  GACCCTTGACCTAACCAATTGCCTAAGGGAGTAGTAGCCAGCTCCTGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTTGACCTAACCAATTGCCTAAGGGAGTAGTAGCCAGCTCCTGGAC  800

seq1  ATTCCCAGTGCTGCCTGTGGATGGATACCACAGGACTTGTGAACTTGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGTGCTGCCTGTGGATGGATACCACAGGACTTGTGAACTTGAAG  850

seq1  AACCTACCTACGGTACAACACGGACTTGGAGCACTGCTGCTACCCTGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACCTACGGTACAACACGGACTTGGAGCACTGCTGCTACCCTGAGG  900

seq1  CCTCAGAGAGGCAGGGTCTCTGCAAGAAAAGAAATCAGAAGTAGATTTTT  950
      ||||||||||||||||||||||||   |||||||||||||||||||||||
seq2  CCTCAGAGAGGCAGGGTCTCTGCA--GAAAGAAATCAGAAGTAGATTTTT  948

seq1  TTTTCTCCCTAAGAGATTTTTAGTAGTCTTTAGATAAAGGGGATGGGGTG  1000
      |||||||||||||||| ||||||||||||||||||||  |||||||||| 
seq2  TTTTCTCCCTAAGAGA-TTTTAGTAGTCTTTAGATAA--GGGATGGGGT-  994

seq1  GCTTGTAGAA-TGTACCTATCTTTGTTCAGTCTCATCCT-AGAGAG-AAT  1047
      |||||||||| ||||||||||||||||||||| |||||| |||||| |||
seq2  GCTTGTAGAATTGTACCTATCTTTGTTCAGTCCCATCCTAAGAGAGAAAT  1044

seq1  ATTAT--CTTTTAGAAAAATTCCCTGATTTGGGGTTTGGGAACTGG-ATT  1094
      |||||   ||||||||||||| |||||||||||||||||| ||||| || 
seq2  ATTATTCTTTTTAGAAAAATT-CCTGATTTGGGGTTTGGG-ACTGGAATG  1092

seq1  GAAG-TCCTCTCA--GGAAGAGTAGCAAGTGTTCCTAAC-TACGGAGC--  1138
      |||| ||||||||  | |||||||||||||||||||||| ||| | ||  
seq2  GAAGTTCCTCTCAAGGAAAGAGTAGCAAGTGTTCCTAACATACCGGGCCT  1142

seq1  TATGTTTTCAGCCCCAAGAAGGTATGGATACTCCGGTCTATGAATCTTAG  1188
      ||  ||| ||||||| |||| | ||||||||||||| ||||||  | |||
seq2  TAGTTTTCCAGCCCC-AGAA-GAATGGATACTCCGG-CTATGA--CCTAG  1187

seq1  CTTGTACTTCACTTTAGTATTGAA  1212
      | || ||||||| |||| ||||||
seq2  C-TGGACTTCAC-TTAG-ATTGAA  1208

seq1: chr2_57306281_57306972
seq2: B6Ng01-134H23.g_71_762 (reverse)

seq1  ACACACACACACACACACACACACACACACACTATTCTTTACTAACAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACTATTCTTTACTAACAAGG  50

seq1  AAAAGGCCACACTGAGATACAATGAAGAACCAGGACAAAAATGTCAGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCCACACTGAGATACAATGAAGAACCAGGACAAAAATGTCAGATG  100

seq1  TGGTGACAGCAGCTGTGGGCAGAGTTTATCCATCTGAATTAAACAGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACAGCAGCTGTGGGCAGAGTTTATCCATCTGAATTAAACAGCTTG  150

seq1  CCCTGTGGCACATGGCCATAGCTGGGGTTACTCCTGCTGCCTGTGCCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGGCACATGGCCATAGCTGGGGTTACTCCTGCTGCCTGTGCCTTG  200

seq1  GCTCTTGCTGGGCTGTCTCTGGCACCTCTACCCACAGTTCCACTAGCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGCTGGGCTGTCTCTGGCACCTCTACCCACAGTTCCACTAGCCTT  250

seq1  TGGCCCTAGTAACCTCCTGGAGCGCAGACTAAGCCAAGAGCCACTTCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTAGTAACCTCCTGGAGCGCAGACTAAGCCAAGAGCCACTTCCAC  300

seq1  TTTCTCAGTACCAACTCTCATTTGAACTCTATTTCCACCTTGGCAAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGTACCAACTCTCATTTGAACTCTATTTCCACCTTGGCAAGCTT  350

seq1  TGTGACGGACCAGGCAGGACCAAAGTTAGAGTTGTGGTGATTTGGGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACGGACCAGGCAGGACCAAAGTTAGAGTTGTGGTGATTTGGGAACA  400

seq1  TCCATTGAAGCTGTAAGCCCTGGAAGTACAACCAGATACTTAGCACCGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGAAGCTGTAAGCCCTGGAAGTACAACCAGATACTTAGCACCGAT  450

seq1  GCGCTCTTGGGAAGGGTGAGGTCACTCTTGGGGAGACAGTCTGGGACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCTTGGGAAGGGTGAGGTCACTCTTGGGGAGACAGTCTGGGACCCT  500

seq1  GCTGCAACCCAGATGGTATCAAGGTCAGATCACTCTGTTTGTGCTTAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAACCCAGATGGTATCAAGGTCAGATCACTCTGTTTGTGCTTAACT  550

seq1  GAGCCAGATCTAAATTCTTCTTGTCCACAGTCCTACTGCTCAAGGTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGATCTAAATTCTTCTTGTCCACAGTCCTACTGCTCAAGGTTGTG  600

seq1  GTTTTTATTACTGTTTATTTAAAACACTAAGCCAAACCAGTCTATCCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTATTACTGTTTATTTAAAACACTAAGCCAAACCAGTCTATCCAGT  650

seq1  TTTGCCCTTTGAAGCTCACACTGACGAGCATTCATAGAATTC  692
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCTTTGAAGCTCACACTGACGAGCATTCATAGAATTC  692