MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-134I08
Chromosome	2 (Build37)
Map Location	148,996,004 - 148,997,201
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Sstr4, Thbd, Cd93, Nxt1, Gzf1, Napb, Cstl1, Cst11, 8030411F24Rik, Cst12, Cst8, Cst13, Cst9, 9230104L09Rik, Cst3, OTTMUSG00000015744, Gm1330, EG668921
Downstream gene	LOC433483, LOC383754, LOC100043593, LOC241715, Cst10, EG667048, C530025M09Rik, OTTMUSG00000015750, LOC279056, Zfp120
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sstr4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20608 MGI:105372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thbd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21824 MGI:98736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cd93 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17064 MGI:106664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nxt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56488 MGI:1929619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gzf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74533 MGI:1921783
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Napb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17957 MGI:104562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cstl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228756 MGI:2652834
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Cst11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78240 MGI:1925490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	8030411F24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78609 MGI:1925859
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cst12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69362 MGI:1916612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins

name	Cst8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13012 MGI:107161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cst13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69294 MGI:1916544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cst9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13013 MGI:1340053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9230104L09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77705 MGI:1924955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cst3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13010 MGI:102519
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	OTTMUSG00000015744 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:408189 MGI:3651572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Gm1330 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:383753 MGI:2686176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	EG668921 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668921 MGI:3643867
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins pseudo : _no_value

name	LOC433483 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	LOC383754 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC100043593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC241715 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:241715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins pseudo : _no_value

name	Cst10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58214 MGI:1930004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667048 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667048 MGI:3643057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 322 ESTs, 25 Proteins pseudo : _no_value

name	C530025M09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319470 MGI:2442090
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs

name	OTTMUSG00000015750 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433485 MGI:3702158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 56 ESTs, 3 Proteins

name	LOC279056 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:279056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins pseudo : _no_value

name	Zfp120 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104348 MGI:1345179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Sstr4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032000 GeneID:20608 MGI:105372
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : somatostatin receptor 4 transcript_id : NM_009219.3

name	Thbd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365367 GeneID:21824 MGI:98736
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thrombomodulin transcript_id : NM_009378.2

name	Cd93 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922670 GeneID:17064 MGI:106664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD93 antigen transcript_id : NM_010740.3

name	Nxt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803395 GeneID:56488 MGI:1929619
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NTF2-related export protein 1 transcript_id : NM_019761.5

name	Gzf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802421 GeneID:74533 MGI:1921783
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GDNF-inducible zinc finger protein 1 transcript_id : NM_028986.2

name	Napb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802184 GeneID:17957 MGI:104562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-ethylmaleimide sensitive fusion protein attachment protein beta transcript_id : NM_019632.2

name	Cstl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891780 GeneID:228756 MGI:2652834
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs product : cystatin-like 1 transcript_id : NM_177655.3

name	Cst11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802553 GeneID:78240 MGI:1925490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystatin 11 transcript_id : NM_030059.2

name	8030411F24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367072 GeneID:78609 MGI:1925859
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8030411F24 gene transcript_id : NM_030135.2

name	Cst12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250191 GeneID:69362 MGI:1916612
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins product : cystatin 12 transcript_id : XM_130487.5

name	Cst8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345059 GeneID:13012 MGI:107161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystatin 8 (cystatin-related epididymal spermatogenic) transcript_id : NM_009978.2

name	Cst13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892558 GeneID:69294 MGI:1916544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystatin 13 transcript_id : NM_027024.3

name	Cst9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753545 GeneID:13013 MGI:1340053
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystatin 9 transcript_id : NM_009979.1

name	9230104L09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358158 GeneID:77705 MGI:1924955
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9230104L09 gene transcript_id : NM_029960.2

name	Cst3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803473 GeneID:13010 MGI:102519
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystatin C transcript_id : NM_009976.3

name	OTTMUSG00000015744 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250192 GeneID:408189 MGI:3651572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, OTTMUSG00000015744 transcript_id : XM_001481087.1

name	Gm1330 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63492482 GeneID:383753 MGI:2686176
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : gene model 1330, (NCBI) transcript_id : XM_485073.2

name	LOC433483 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250044 GeneID:433483
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : similar to Cystatin-related protein 1 precursor (CRP-1) (Prostatic 22 kDa glycoprotein P22K16/P22K20) (Androgen-regulated 20 kDa protein) transcript_id : XM_485074.4

name	Cst10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892337 GeneID:58214 MGI:1930004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystatin 10 (chondrocytes) transcript_id : NM_021405.2

name	C530025M09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94367298 GeneID:319470 MGI:2442090
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs product : RIKEN cDNA C530025M09 gene transcript_id : XM_893535.2

name	OTTMUSG00000015750 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250196 GeneID:433485 MGI:3702158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 56 ESTs, 3 Proteins product : predicted gene, OTTMUSG00000015750, transcript variant 1 transcript_id : XM_485077.5

name	Zfp120 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91064881 GeneID:104348 MGI:1345179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 120 transcript_id : NM_023266.4

name	Zfp120 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91064879 GeneID:104348 MGI:1345179
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 120 transcript_id : NM_181266.2

name	Sstr4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:49169818 GeneID:20608 MGI:105372
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : somatostatin receptor 4 protein_id : NP_033245.2

name	Thbd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678339 CCDS:CCDS16838.1 GeneID:21824 MGI:98736
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA]; GO:0004888 - transmembrane receptor activity [Evidence IEA] GO_process : GO:0007596 - blood coagulation [Evidence TAS]; GO:0009790 - embryonic development [Evidence IMP]; GO:0050819 - negative regulation of coagulation [Evidence TAS]; GO:0007565 - pregnancy [Evidence IMP] codon_start : 1 note : snoRNA MBII-339 product : thrombomodulin protein_id : NP_033404.1

name	Cd93 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754578 CCDS:CCDS16839.1 GeneID:17064 MGI:106664
definition	GO_component : GO:0016023 - cytoplasmic membrane-bound vesicle [Evidence IDA]; GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] [Evidence ISS]; GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0016337 - cell-cell adhesion [Evidence ISS]; GO:0006952 - defense response [Evidence IEA]; GO:0042116 - macrophage activation [Evidence ISS]; GO:0006909 - phagocytosis [Evidence ISS] codon_start : 1 note : lymphocyte antigen 68 product : complement component 1, q subcomponent, receptor 1 protein_id : NP_034870.1

name	Nxt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981051 CCDS:CCDS16840.1 GeneID:56488 MGI:1929619
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0008536 - Ran GTPase binding [Evidence IDA] GO_process : GO:0006406 - mRNA export from nucleus [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0006611 - protein export from nucleus [Evidence IDA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006405 - RNA export from nucleus [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : NTF2-related export protein 1 protein_id : NP_062735.3

name	Gzf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674207 CCDS:CCDS16841.1 GeneID:74533 MGI:1921783
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0001658 - ureteric bud branching [Evidence IMP] codon_start : 1 product : zinc finger protein 336 protein_id : NP_083262.1

name	Napb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789104 CCDS:CCDS16842.1 GeneID:17957 MGI:104562
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005478 - intracellular transporter activity [Evidence IEA]; GO:0019905 - syntaxin binding [Evidence IDA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : brain protein I47; brain protein 14; beta-soluble NSF attachment protein product : N-ethylmaleimide sensitive fusion protein attachment protein beta protein_id : NP_062606.1

name	Cstl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244070 CCDS:CCDS16844.1 GeneID:228756 MGI:2652834
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 3 is encoded by transcript variant 3 product : cystatin-like 1 isoform 3 protein_id : NP_808323.1

name	Cst11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037521 CCDS:CCDS16845.1 GeneID:78240 MGI:1925490
definition	GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 note : cystatin-related epididymal spermatogenic protein 2; cystatin E1 product : cystatin 11 protein_id : NP_084335.1

name	8030411F24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037529 CCDS:CCDS16846.1 GeneID:78609 MGI:1925859
definition	codon_start : 1 note : cystatin SC; novel protein containing a Cystatin domain product : RIKEN cDNA 8030411F24 protein_id : NP_084411.1

name	Cst12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94367293 GeneID:69362 MGI:1916612
definition	codon_start : 1 product : cystatin-related epididymal spermatogenic protein 3 protein_id : XP_130487.3

name	Cst8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468891 CCDS:CCDS16848.1 GeneID:13012 MGI:107161
definition	GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 product : cystatin 8 (cystatin-related epididymal spermatogenic) protein_id : NP_034108.1

name	Cst13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47575695 CCDS:CCDS16849.1 GeneID:69294 MGI:1916544
definition	GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 product : cystatin T protein_id : NP_081300.1

name	Cst9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753546 CCDS:CCDS16850.1 GeneID:13013 MGI:1340053
definition	GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 product : cystatin 9 protein_id : NP_034109.1

name	9230104L09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037501 CCDS:CCDS16851.1 GeneID:77705 MGI:1924955
definition	GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 note : Cystatin 12; novel protein containing a Cystatin domain product : cystatin E2 protein_id : NP_084236.1

name	Cst3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981822 CCDS:CCDS16852.1 GeneID:13010 MGI:102519
definition	GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA]; GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] codon_start : 1 note : cystatin 3 product : cystatin C protein_id : NP_034106.2

name	OTTMUSG00000015744 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250193 GeneID:408189 MGI:3651572
definition	codon_start : 1 product : cystatin ap4 protein_id : XP_001481137.1

name	Gm1330 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82887134 GeneID:383753 MGI:2686176
definition	codon_start : 1 product : cystatin ap5 protein_id : XP_485073.3

name	LOC433483 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250045 GeneID:433483
definition	codon_start : 1 product : similar to Cystatin-related protein 1 precursor (CRP-1) (Prostatic 22 kDa glycoprotein P22K16/P22K20) (Androgen-regulated 20 kDa protein) protein_id : XP_485074.3

name	Cst10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946758 CCDS:CCDS16853.1 GeneID:58214 MGI:1930004
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004869 - cysteine protease inhibitor activity [Evidence IEA] codon_start : 1 product : cystatin 10 (chondrocytes) protein_id : NP_067380.1

name	C530025M09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82887150 GeneID:319470 MGI:2442090
definition	codon_start : 1 product : hypothetical protein LOC319470 protein_id : XP_898628.1

name	OTTMUSG00000015750 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51706417 GeneID:433485 MGI:3702158
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_485077.1

name	Zfp120 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91064880 GeneID:104348 MGI:1345179
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : zinc finger protein 120 isoform 1 protein_id : NP_851783.2

name	Zfp120 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91064882 GeneID:104348 MGI:1345179
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : zinc finger protein 120 isoform 2 protein_id : NP_075755.4

name	LOC100043593 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043593
definition	number : 4 pseudo : _no_value

name	LOC100043593 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043593
definition	number : 3 pseudo : _no_value

name	LOC100043593 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043593
definition	number : 2 pseudo : _no_value

name	LOC100043593 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043593
definition	number : 1 pseudo : _no_value

name	EG668921 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250041 GeneID:668921 MGI:3643867
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins product : predicted gene, EG668921 pseudo : _no_value transcript_id : XR_034712.1

name	LOC383754 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250046 GeneID:383754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to RNA polymerase I transcription termination factor 1 pseudo : _no_value transcript_id : XR_034716.1

name	LOC241715 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250194 GeneID:241715
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins product : similar to chloride channel, nucleotide-sensitive, 1A pseudo : _no_value transcript_id : XR_034986.1

name	EG667048 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149250195 GeneID:667048 MGI:3643057
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 322 ESTs, 25 Proteins product : predicted gene, EG667048 pseudo : _no_value transcript_id : XR_034987.1

name	LOC279056 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250047 GeneID:279056
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins product : similar to XPMC2 prevents mitotic catastrophe 2 homolog pseudo : _no_value transcript_id : XR_034724.1

clone name	MSMg01-530H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300C17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-311M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335E20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-152K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322J05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-198O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178J14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-333E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330F09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-134I08.b	B6Ng01-134I08.g
ACC	DH934796	DH934797
length	1,167	1,158
definition	DH934796\|Mus musculus domesticus DNA, BAC clone: B6Ng01-134I08, 5' end.	DH934797\|Mus musculus domesticus DNA, BAC clone: B6Ng01-134I08, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcatgttacttctcacccttattcctttgttctttttaatgctttc tctcattccatttttgctgccgaactttttggattcctgcttgaaatata tgaagccaagtcttcaaacatactattgggcagaatgtcaccttttgtac caagttttgtctgtcctataactttaaatgtctactatatatacacttac ctttgttcttgaggtatgctttgttggtggaaagaatggataactacaag aatatttcattttctatatttgatcatttttagcattatatattttccct ttgcatttctccaatctgtaaacatgacatagggaagaacatgttggccc ataatttgtatgtttttgggactctgttttcttatgaaaacatgaggata taccatgtttcaaaatatcaggtccaagaaaggttgttaacattgactat atacattctcatccagaaattatcttatttaattccctgcttgtggttta cattttgatgtacacactaacctgtatttttccccatgatcatttcttgc tacagagaagacatggggtatggctaacactcacactgaaagagagcctt tgaaagagaaatttcatggcctcagtgtcccatagttagagccaaggaat gggtaccttcgagctaggtgatgtgccttatcagcttagtaaggaataag aatcttgaaacaatgctcagaaggtaatgaatgcagttcagaatgtttgt catcatggccttagtgttgatccaacctccatagatttggacaagaaatg tgaatccactttctttttcaccatttaattatttgccatgtttacactat gtacaaaaaccttttattcatgaagtgattttatataggtgttgttatat gttctgtagaggcagagtagcatctcttatgctagccagaccagacaact gatttcctgtataaattgacagaaaaatactggagaggtctctgttaaaa tgtctatggtattgcaacatcagagagtgataaaagattcagtttaattg ataaaaacttggattatcactctaggaggttgaaaggtaagaatgatggg aacacgaggagggacaaagtattagggaagttagcattcataagcatata gtccaatcatatataat	gaattctcacccgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc agatgctggcgtggatatggagaaagaggaacactcctccattgttgttg ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactatcggaggatccagcaattcctctcctgggc atatatccagaagatgccccaactggtaagaaggacacatgctccactat gttcatagcagccttatttatagtagccagaagctggaaagaacccagat gcccctcaacagaggaatggttacagaaaatgtggtacatcttcacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa ggaactcacacaatatgtactcactgataagtggatattagccccaaacc taggatacccaagatataaaatacaatttgctaaacacatgaaactcaag aagaatgaagactgaagtgtggacactacgcccctccttagaattgggaa caaaacacccatggaaggagttacaaagacaaagtttggagatgagatga aaggatggaccatgtagagtctgccatatccaggcatccaccccataatc agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac acagaagtggatgctcacagtcagctaatggatggatcacaggctcccat tggagagctagagaaagtagccaagagctaaagggatctgcaccctatag ttgaacacattatgactaacagtacccagagctcttgactctagctgcaa tgtatcaaaagaatgctagtcgcatcctgaaagagatgccattgactgca actttaattgccctagttacaggaacgtcagtcaaagggtggatggtgtt gggttaga
quality values	Open. Hide. 61 47 24 35 61 26 24 43 47 61 61 55 61 61 61 61 61 49 36 61 61 61 61 61 61 61 33 39 45 33 37 28 37 35 35 59 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 59 61 61 59 59 59 35 59 59 44 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 35 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 59 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 59 61 59 61 59 61 59 52 61 59 36 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 45 61 61 61 61 61 61 61 61 61 61 61 50 45 57 45 57 57 53 57 53 53 57 57 57 57 57 57 45 53 57 57 53 53 38 45 32 30 39 45 53 45 53 52 53 53 57 57 57 57 32 57 33 57 38 47 53 45 57 53 53 57 57 57 45 57 38 57 57 53 38 57 57 57 40 57 57 57 50 57 53 53 42 42 50 47 39 43 37 37 37 45 45 52 53 57 45 53 57 45 47 47 38 41 38 57 47 47 31 57 43 47 45 45 44 46 50 53 45 28 52 42 52 41 43 27 57 50 52 52 38 53 50 50 43 43 35 45 41 45 50 40 36 53 53 47 50 29 52 52 53 39 40 38 53 42 38 57 24 53 52 34 53 40 53 50 37 57 50 52 21 37 36 39 36 52 41 33 18 46 53 12 57 23 33 26 22 53 53 37 32 34 27 36 36 40 40 31 37 24 57 40 30 52 21 53 34 37 27 37 31 40 37 26 41 30 30 32 53 31 40 36 33 25 53 17 44 40 30 32 29 32 17 40 35 57 37 33 40 30 40 48 31 34 23 51 43 30 30 29 19 22 30 27 46 46 47 32 43 16 30 31 41 30 36 48 31 38 30 51 29 48 30 46 42 46 20 33 33 35 29 28 39 51 29 31 36 28 39 39 29 51 30 15 16 43 24 28 45 14 48 11 14 29 20 29 30 33 35 39 29 28 30 29 51 51 51 36 27 29 21 23 23 6 5 13 12 22 14 19 29 29 30 25 14 22 9 8 10 12 17 19 11 21 14 21 12 16 8 32 17 29 29 31 17 39 22 22 25 43 31 28 29 16 24 16 41 23 41 34 29 20 25 14 40 15 31 34 20 29 19 36 26 34 22 11 36 15 28 34 30 33 34 20 26 9 8 8 13 22 20 26 10 29 20 21 16 26 28 34 34 26 51 34 24 26 25 31 12 19 29 20 38 28 27 28 22 16 23 14 31 29 44 32 51 19 19 17 28 28 33 12 22 6 38 12 20 17 38 10 9 12 28 24 18 29 44 44 30 11 25 4 16 11 9 6 20 34 7 9 13 13 19 8 6 10 30 9 9 15 19 29 11 4 20 8 8 15 12 5 16 33 37 11 8 15 16 15 30 5 8 15 31 21 5 3 4 5 7 29 11 14 36 36 36 23 20 22 29 10 14 7 13 12 30 6 18 6 12 8 9 9 5 20 6 23 5 8 26 23 10 7 7 3 5 18 10 25 15 6 15 26 6 18 2 4 12 26 12 6 8 7 8 10 10 14 12 8 16 11 16 5 4 5 4 25 17 5 5 5 8 23 11 18 30 7 17 4 7 8 5 13 5 4 4 3 5 10 3 6 6 14 17 13 4 8 7 5 3 8 6 19 15 4 5 12 5 3 14 9 10 8 13 3 3 3	Open. Hide. 61 61 61 47 61 61 61 49 27 52 34 28 27 52 37 55 59 59 59 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 61 61 44 44 59 61 61 61 61 61 59 59 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 55 61 61 61 61 61 61 59 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 52 61 61 59 59 59 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 59 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 52 55 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 50 55 61 61 61 61 61 61 61 61 61 61 55 55 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 46 46 46 53 53 61 61 50 61 61 61 61 61 61 61 61 61 53 47 57 57 57 57 47 53 57 57 45 53 53 53 47 53 53 53 53 53 53 57 57 57 53 43 42 30 57 53 57 53 57 53 57 57 53 42 57 50 57 53 53 57 57 47 53 53 53 47 53 50 53 45 53 53 53 57 53 53 53 53 57 53 45 53 57 57 53 53 53 57 46 43 57 47 47 42 52 47 43 53 50 47 47 47 46 35 52 42 53 53 53 53 38 47 30 33 39 50 53 47 36 53 50 37 33 50 53 57 57 57 47 38 53 50 53 53 53 57 57 51 47 36 22 57 53 53 41 53 40 53 53 53 57 53 45 52 43 53 34 37 57 53 36 57 45 42 53 52 37 37 37 25 44 53 35 33 33 53 52 31 53 47 50 35 28 47 50 38 52 28 36 21 19 25 37 31 38 33 39 39 30 47 42 38 34 53 57 37 37 39 38 14 40 37 37 36 30 27 37 37 32 36 46 38 23 37 24 52 38 32 31 41 34 53 23 57 37 33 30 24 27 57 40 28 37 57 32 46 36 47 23 29 22 33 48 14 31 29 34 53 57 40 29 35 33 29 40 53 30 18 47 24 31 47 31 37 31 47 31 32 34 29 31 21 22 18 41 43 31 16 30 23 38 25 29 20 30 14 30 18 30 45 39 44 31 29 20 41 28 22 27 30 28 24 29 22 29 29 45 29 29 21 26 29 29 29 28 21 30 30 23 31 18 34 28 13 29 22 30 31 33 28 29 29 29 31 23 28 25 7 51 51 43 29 35 31 29 29 51 27 33 20 28 28 31 25 24 21 23 14 29 25 23 22 31 38 34 31 31 34 31 23 31 20 9 27 31 20 29 20 34 28 25 26 22 33 16 41 39 25 14 20 24 31 19 41 30 43 28 18 12 29 14 12 19 41 16 25 14 32 16 17 28 24 30 34 15 17 10 38 34 33 27 31 34 28 23 23 21 38 22 20 15 31 24 21 7 8 16 20 8 17 19 11 19 14 51 24 13 6 8 18 25 15 7 13 8 9 26 23 12 9 11 22 51 19 25 26 19 14 19 22 20 7 24 12 15 27 26 15 35 23 13 44 17 17 17 28 20 27 15 35 11 26 19 19 17 26 10 22 8 8 34 23 19 16 16 6 6 29 13 25 25 10 14 8 9 11 11 16 6 6 6 7 25 29 30 8 6 33 9 11 11 9 15 29 29 26 22 20 10 6 10 17 16 12 29 8 4 5 7 12 16 19 23 14 20 35 32 9 5 4 10 4 10 3 7 12 5 4 7 16 4 4 20 10 5 8 3 4 8 11 14 24 11 16 7 6 21 16 3 9 14 12 3 7 19 11 20 19 19 20 19 13 7 9 7 17 8 5 13 19 18 7 4 4 7 8 6 6 3 4 6 3 4 5 3 3 8 4 9 4 9 5 16 13 3 23 20 6 7 7 18 7 10 5 4 13 6 6 18 24 14 19 4 4 6 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr2_148996004_148997201
seq2: B6Ng01-134I08.b_44_1210 (reverse)

seq1  ATTATATATAATGATATGTGACTATATGACCTTATGATATGCCTTTACTT  50
      ||||||||| ||    || |||||||||  ||||||| ||||   ||  |
seq2  ATTATATATGAT----TG-GACTATATG--CTTATGA-ATGC---TAACT  39

seq1  TCCCTAATACTTTTGCTCCTCCTCTGTTTCCCATCCATTCTTACCCTATT  100
      |||||||||| ||||  |||||||   ||||||| ||||||||||   ||
seq2  TCCCTAATAC-TTTGTCCCTCCTCGTGTTCCCAT-CATTCTTACC---TT  84

seq1  TCAAACTTCCT--AGTGATTAATCCAAGTTTTTATTCATTTAAACTGGAA  148
      || ||| ||||  ||||| ||||||||||||||| ||| ||||||| |||
seq2  TC-AACCTCCTAGAGTGA-TAATCCAAGTTTTTA-TCAATTAAACT-GAA  130

seq1  TCTTTTATCACTCTTCCTTGATGTTTGCCAATACCATAGACCATTTTTAA  198
      ||||||||||||||    |||||||   |||||||||||||   ||||||
seq2  TCTTTTATCACTCT---CTGATGTT--GCAATACCATAGAC--ATTTTAA  173

seq1  CAGAGGACCTCTCCAGTATTTTTCTGTCAATTTATACAGGAAATCAGTTG  248
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGA-GACCTCTCCAGTATTTTTCTGTCAATTTATACAGGAAATCAGTTG  222

seq1  TCTTGGTCCTTGGCTAGCATAAGAGATGCTACTCTGCCTCTACAGAACAT  298
      || |||||  ||||||||||||||||||||||||||||||||||||||||
seq2  TC-TGGTC--TGGCTAGCATAAGAGATGCTACTCTGCCTCTACAGAACAT  269

seq1  ATTAACAACACCTATTATAAAATCACTTCATGAATGAAAGGTTTTTGTAC  348
      | |||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  A-TAACAACACCTA-TATAAAATCACTTCATGAATAAAAGGTTTTTGTAC  317

seq1  ATAGTGTAAACATGGCAAATAATTAAATGGTGAAAAAGAAAGTGGATTCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTAAACATGGCAAATAATTAAATGGTGAAAAAGAAAGTGGATTCA  367

seq1  CATTTCTTGTCCAAATCTATGGAGGTTGGATCAACACTAAGGCCATGATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTGTCCAAATCTATGGAGGTTGGATCAACACTAAGGCCATGATG  417

seq1  ACAAACATTCTGAACTGCATTCATTACCTTCTGAGCATTGTTTCAAGATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATTCTGAACTGCATTCATTACCTTCTGAGCATTGTTTCAAGATT  467

seq1  CTTATTCCTTACTAAGCTGATAAGGCACATCACCTAGCTCGAAGGTACCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTCCTTACTAAGCTGATAAGGCACATCACCTAGCTCGAAGGTACCC  517

seq1  ATTCCTTGGCTCTAACTATGGGACACTGAGGCCATGAAATTTCTCTTTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGGCTCTAACTATGGGACACTGAGGCCATGAAATTTCTCTTTCA  567

seq1  AAGGCTCTCTTTCAGTGTGAGTGTTAGCCATACCCCATGTCTTCTCTGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCTCTTTCAGTGTGAGTGTTAGCCATACCCCATGTCTTCTCTGTA  617

seq1  GCAAGAAATGATCATGGGGAAAAATACAGGTTAGTGTGTACATCAAAATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAATGATCATGGGGAAAAATACAGGTTAGTGTGTACATCAAAATG  667

seq1  TAAACCACAAGCAGGGAATTAAATAAGATAATTTCTGGATGAGAATGTAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCACAAGCAGGGAATTAAATAAGATAATTTCTGGATGAGAATGTAT  717

seq1  ATAGTCAATGTTAACAACCTTTCTTGGACCTGATATTTTGAAACATGGTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCAATGTTAACAACCTTTCTTGGACCTGATATTTTGAAACATGGTA  767

seq1  TATCCTCATGTTTTCATAAGAAAACAGAGTCCCAAAAACATACAAATTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCATGTTTTCATAAGAAAACAGAGTCCCAAAAACATACAAATTAT  817

seq1  GGGCCAACATGTTCTTCCCTATGTCATGTTTACAGATTGGAGAAATGCAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAACATGTTCTTCCCTATGTCATGTTTACAGATTGGAGAAATGCAA  867

seq1  AGGGAAAATATATAATGCTAAAAATGATCAAATATAGAAAATGAAATATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAATATATAATGCTAAAAATGATCAAATATAGAAAATGAAATATT  917

seq1  CTTGTAGTTATCCATTCTTTCCACCAACAAAGCATACCTCAAGAACAAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGTTATCCATTCTTTCCACCAACAAAGCATACCTCAAGAACAAAG  967

seq1  GTAAGTGTATATATAGTAGACATTTAAAGTTATAGGACAGACAAAACTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTGTATATATAGTAGACATTTAAAGTTATAGGACAGACAAAACTTG  1017

seq1  GTACAAAAGGTGACATTCTGCCCAATAGTATGTTTGAAGACTTGGCTTCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAAGGTGACATTCTGCCCAATAGTATGTTTGAAGACTTGGCTTCA  1067

seq1  TATATTTCAAGCAGGAATCCAAAAAGTTCGGCAGCAAAAATGGAATGAGA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCAAGCAGGAATCCAAAAAGTTCGGCAGCAAAAATGGAATGAGA  1117

seq1  GAAAGCATTAAAAAGAACAAAGGAATAAGGGTGAGAAGTAACATGAATTC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATTAAAAAGAACAAAGGAATAAGGGTGAGAAGTAACATGAATTC  1167

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information