BAC Information

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BAC

Clone NameB6Ng01-134M24
Chromosome2 (Build37)
Map Location 139,578,479 - 139,733,416
singlet/doubletdoublet
Overlap gene5430433G21Rik, Tasp1
Upstream geneLOC628103, C130053K05Rik, LOC100043792
Downstream geneLOC672103, LOC269365, Esf1, 2310003L22Rik, Sel1l2, 2900006F19Rik, Flrt3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134M24.bB6Ng01-134M24.g
ACCDH935015DH935016
length1,108357
definitionDH935015|Mus musculus domesticus DNA, BAC clone: B6Ng01-134M24, 5' end.DH935016|Mus musculus domesticus DNA, BAC clone: B6Ng01-134M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,732,295 - 139,733,416)(139,578,479 - 139,579,027)
sequence
gaattcatttctttacggcatatctattaattttatatgatgtattttga
tcatatatatctccttccctaactattcctacacccaccatcttaactat
ggggtctcccctgtgttgtggtccactctgctgtataaaggagtcacata
aaaagaccattagtgtatgttggttcaggctgggagaagtgttttatagc
accatgttcaggagggatatgatggttaatagggctatagttgggttttc
ttcttccccttggttgtttagacttagataaaaccacacagatttcgggt
ctggtaaaagagtttctccaggggtgaggcctagtgaagaacagaatgct
tttactgaagttagtagataacttattcttgctgtgattttttttaaagt
tagatttgcctgacaattattgatcatattttcacaaactggttgactgt
atatatgtcttaattttgatttttttttttcaagacagggtttctctgtg
tagccctggctgtcctggaactcactctgtagaccaggctggcctcgaac
tcagaaatccacctgcctctgcctcccgagtgctgggattaaaggcgtgc
gccaccatgatatatcttatatatattgctcatttaaaaatcagattatc
ttgtggtatctggtagtgcaggcctatcatttttgctccttgggaggctg
aggcacagtgctcaccagctaaagagcagcttgagcaaattagtgagatc
ttgtctcaaaataaaaaccacagaggtgtggctgcagctcagtagcagat
gcctgcctgctggggaagactgttgcttcatcgaaatggcttttttaaat
ggttgttttgtttatttacatttcaaatgttcccccttccaggtttcccc
tctgcaaacctccatccagccccttccctttgcctctatgaggatgctcc
ccacccactcccattcctgctcacactctagcatttccttacactgcagt
atcaagcttcacaggacaagggtcctcccctttcggtgacgcagataagg
catctcttgctacatatggcgctggaacattggttcctcccagcgtactc
ttgtttgg
agctctgggtcaattttcttgctgcctagctcaattgatacatatttccc
tgagtaccatggctccctaggaacctctgaacaagcctaaactgaacaag
atctccattgcatgatacccaacaaccttgctctcttgtgtgttctgctc
cagaggaaaggaaagcatcctcagccccagcccagcccaatcatcctcac
tcttgaattctgtgtgtctgtctgtctgtctgtctgtctgtctctctctc
tgtgtgtgtgtatgtctctctctctctctctctctctctctctctctctc
tctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtatttt
ttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_139732295_139733416
seq2: B6Ng01-134M24.b_50_1157 (reverse)

seq1  CCAAACAAAGAGTACGCGTGGAGGGACCAATGGCTCCAGCTGCATATGTA  50
      |||||| ||||||||||  ||||| |||||| | ||||||  ||||||||
seq2  CCAAAC-AAGAGTACGCTGGGAGGAACCAAT-GTTCCAGCGCCATATGTA  48

seq1  GCAGAGGATGGCCTTATCTGGCGTCAACGGGAGGGGA-GACCCTTGGTCC  99
      |||   ||| ||||||||| |||||| ||  |||||| ||||||| ||||
seq2  GCAAGAGAT-GCCTTATCT-GCGTCACCGAAAGGGGAGGACCCTT-GTCC  95

seq1  TGTGGAGGCTTGATACTGCAGTGTAAGGAAATGCTAGAGTGGTGAGGCAG  149
      ||| || ||||||||||||||||||||||||||||||||| |||| ||||
seq2  TGT-GAAGCTTGATACTGCAGTGTAAGGAAATGCTAGAGT-GTGA-GCAG  142

seq1  GAATGGGGAGGTGGGTGGGGGAGCATCCTCATAGAGGCAAAGGGGAAGGG  199
      |||||||   |||||| |||||||||||||||||||||||||||  | ||
seq2  GAATGGG--AGTGGGT-GGGGAGCATCCTCATAGAGGCAAAGGG--AAGG  187

seq1  GGCTGGGATGGAGGTTTGCAGAGGGGAAACCTGGAAGGGGGAACATTTGA  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCT-GGATGGAGGTTTGCAGAGGGGAAACCTGGAAGGGGGAACATTTGA  236

seq1  AATGTAAATAAACAAAACAACCATTTAAAAAAAGCCATTTCGATGAAGCA  299
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AATGTAAATAAACAAAACAACCATTT-AAAAAAGCCATTTCGATGAAGCA  285

seq1  ACAGTCTTCCCCAGCAGGCAGGCATCTGCTACTGAGCTGCAGCCACACCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTTCCCCAGCAGGCAGGCATCTGCTACTGAGCTGCAGCCACACCT  335

seq1  CTGTGGTTTTTATTTTGAGACAAGATCTCACTAATTTGCTCAAGCTGCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTTTTATTTTGAGACAAGATCTCACTAATTTGCTCAAGCTGCTC  385

seq1  TTTAGCTGGTGAGCACTGTGCCTCAGCCTCCCAAGGAGCAAAAATGATAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGGTGAGCACTGTGCCTCAGCCTCCCAAGGAGCAAAAATGATAG  435

seq1  GCCTGCACTACCAGATACCACAAGATAATCTGATTTTTAAATGAGCAATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCACTACCAGATACCACAAGATAATCTGATTTTTAAATGAGCAATA  485

seq1  TATATAAGATATATCATGGTGGCGCACGCCTTTAATCCCAGCACTCGGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGATATATCATGGTGGCGCACGCCTTTAATCCCAGCACTCGGGA  535

seq1  GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGT  585

seq1  GAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTTGAAAAAAA  635

seq1  AAAATCAAAATTAAGACATATATACAGTCAACCAGTTTGTGAAAATATGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAAAATTAAGACATATATACAGTCAACCAGTTTGTGAAAATATGA  685

seq1  TCAATAATTGTCAGGCAAATCTAACTTTAAAAAAAATCACAGCAAGAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAATTGTCAGGCAAATCTAACTTTAAAAAAAATCACAGCAAGAATA  735

seq1  AGTTATCTACTAACTTCAGTAAAAGCATTCTGTTCTTCACTAGGCCTCAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCTACTAACTTCAGTAAAAGCATTCTGTTCTTCACTAGGCCTCAC  785

seq1  CCCTGGAGAAACTCTTTTACCAGACCCGAAATCTGTGTGGTTTTATCTAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGAGAAACTCTTTTACCAGACCCGAAATCTGTGTGGTTTTATCTAA  835

seq1  GTCTAAACAACCAAGGGGAAGAAGAAAACCCAACTATAGCCCTATTAACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAACAACCAAGGGGAAGAAGAAAACCCAACTATAGCCCTATTAACC  885

seq1  ATCATATCCCTCCTGAACATGGTGCTATAAAACACTTCTCCCAGCCTGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATATCCCTCCTGAACATGGTGCTATAAAACACTTCTCCCAGCCTGAA  935

seq1  CCAACATACACTAATGGTCTTTTTATGTGACTCCTTTATACAGCAGAGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATACACTAATGGTCTTTTTATGTGACTCCTTTATACAGCAGAGTG  985

seq1  GACCACAACACAGGGGAGACCCCATAGTTAAGATGGTGGGTGTAGGAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACAACACAGGGGAGACCCCATAGTTAAGATGGTGGGTGTAGGAATA  1035

seq1  GTTAGGGAAGGAGATATATATGATCAAAATACATCATATAAAATTAATAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGGAAGGAGATATATATGATCAAAATACATCATATAAAATTAATAG  1085

seq1  ATATGCCGTAAAGAAATGAATTC  1122
      |||||||||||||||||||||||
seq2  ATATGCCGTAAAGAAATGAATTC  1108

seq1: chr2_139578479_139579027
seq2: B6Ng01-134M24.g_69_431

seq1  GAATTCAGCTCTGGGTCAATTTTCTTGCTGCCTAGCTCAATTGATACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCTGGGTCAATTTTCTTGCTGCCTAGCTCAATTGATACATA  50

seq1  TTTCCCTGAGTACCATGGCTCCCTAGGAACCTCTGAACAAGCCTAAACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGAGTACCATGGCTCCCTAGGAACCTCTGAACAAGCCTAAACTG  100

seq1  AACAAGATCTCCATTGCATGATACCCAACAACCTTGCTCTCTTGTGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGATCTCCATTGCATGATACCCAACAACCTTGCTCTCTTGTGTGTT  150

seq1  CTGCTCCAGAGGAAAGGAAAGCATCCTCAGCCCCAGCCCAGCCCAATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCAGAGGAAAGGAAAGCATCCTCAGCCCCAGCCCAGCCCAATCAT  200

seq1  CCTCACTCTTGAATTCTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTCTTGAATTCTGTGTGTCTGTCTGTCTGTCTGTCTGTCTGTCTC  250

seq1  TCTCTCTGTGTGTGTGTATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTGTGTGTGTATGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  300

seq1  TCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG  350

seq1  TGTGTGTGTGTGTGTGTGTATTAGGCTTGAGATCTCTCATGATCTCCATG  400
      | | | | | | |                                     
seq2  TATTTTTTTTTTT-------------------------------------  363

seq1  TCTCTACTACCCATGCAGTGCTGGGGTTACAAACATATGCTCACTGCACC  450
                                                        
seq2  --------------------------------------------------  363

seq1  CAACTTTTTCATCAGTACTGGAGACCTGAACTCATGCTTAGTCGCAAGTA  500
                                                        
seq2  --------------------------------------------------  363

seq1  CTTTGTACACTAAGCCATCTCTTCAGTGCCCCATCAGATTTTTTTTTTT  549
                                                       
seq2  -------------------------------------------------  363