BAC Information

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BAC

Clone NameB6Ng01-135B15
Chromosome2 (Build37)
Map Location 86,305,197 - 86,306,226
singlet/doubletsinglet
Overlap genenone
Upstream gene4833423E24Rik, Olfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1
Downstream geneOlfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079, Olfr1080, Olfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135B15.bB6Ng01-135B15.g
ACCDH935228DH935229
length1,1661,014
definitionDH935228|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B15, 5' end.DH935229|Mus musculus domesticus DNA, BAC clone: B6Ng01-135B15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcatatttgttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggtttccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctcc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctgatatgcagctattgatctagcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggttaactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatgtgcgtatcagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaggt
gaaagataagttattgcacctggcacctcctacaaccaagaaagaagcac
aacgtttagtgggtctatttggattctggagataacacatccctcacttg
ggtgtgttacttaggcctatttaccaagtgactcggaaagctgctagctt
tgtgtggggcctggaacaggagaaggccttcacagtccagctgctgtgca
gctgctctaccacttgaccatatgacccagcagacccaatggtacttgag
gtgtctgtggctgatagagatgctgttgagcttcttgcagccctgtagtg
aatcaagaaaagaccttggattggagcaagctctacatcatctgcagaca
actatatctcccttgaaacagctctgcctgcatatggcttatggaaacgg
accgtttgacataggc
gaattcagtcaccattgtaaagttgtgactcgccatcaggtttatgagaa
attctgttttgagtggaaatcattgcacagtcaatagatttcaagtgcca
tttggtgagtttttatcatctaaacgtgcttaaataaattatcttcaaac
attgaaatttattttgaaatatattaaaatatgtatatatcttctgtaat
ctacacacacacatgcaaacatgtgatgtgaaatacacaattatgaatat
ttagttttgttccaataataacttaaatcagagaataccgtaattaactg
ccaatgtttgctcttcccaactgtattgagagcagtcactttaattcact
actacactatatatatatatgcatatatatatatgacaaagaaaatcaag
tatataaattgtagacagttatcgatagaacattgatgaaatttattttt
ctgatatttttatttctgacatggttactaacacacattagcacttaatg
tttatgtacttgtggtaatgtaaatatactacatgaagactgaagtgtga
acactatgcccctccttagaagtgggaacaaaacacccttggaaggagtt
acagagacaaagtttggagctgagataaaaggatggaccatgtagacact
accatatccggggatccatcccataatcagcttccaaatgctgacaccat
tgcatacactagcaagattatgctgaaaggaccctgatatagctgtctct
tgtcagagtatgcctgggcctagcaaacatagaagtggacgctcacagtc
ggctattggatggatcacatggcccccaatgaaggagctagagaaagtac
caaagaagctaaagggatctgcaaccctataggtggaacaacattatgaa
ctaaccagtacccggagctctgactctagctgcatatgcatcaaagtgct
agtcgcatcactgaagagagcccatgacacgcaaactttatatgcccagt
acagggacgccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86305197_86306226
seq2: B6Ng01-135B15.g_66_1079

seq1  GAATTCAGTCACCATTGTAAAGTTGTGACTCGCCATCAGGTTTATGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCACCATTGTAAAGTTGTGACTCGCCATCAGGTTTATGAGAA  50

seq1  ATTCTGTTTTGAGTGGAAATCATTGCACAGTCAATAGATTTCAAGTGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTTTGAGTGGAAATCATTGCACAGTCAATAGATTTCAAGTGCCA  100

seq1  TTTGGTGAGTTTTTATCATCTAAACGTGCTTAAATAAATTATCTTCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGAGTTTTTATCATCTAAACGTGCTTAAATAAATTATCTTCAAAC  150

seq1  ATTGAAATTTATTTTGAAATATATTAAAATATGTATATATCTTCTGTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATTTATTTTGAAATATATTAAAATATGTATATATCTTCTGTAAT  200

seq1  CTACACACACACATGCAAACATGTGATGTGAAATACACAATTATGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACACACACATGCAAACATGTGATGTGAAATACACAATTATGAATAT  250

seq1  TTAGTTTTGTTCCAATAATAACTTAAATCAGAGAATACCGTAATTAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTGTTCCAATAATAACTTAAATCAGAGAATACCGTAATTAACTG  300

seq1  CCAATGTTTGCTCTTCCCAACTGTATTGAGAGCAGTCACTTTAATTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTTGCTCTTCCCAACTGTATTGAGAGCAGTCACTTTAATTCACT  350

seq1  ACTACACTATATATATATATGCATATATATATATGACAAAGAAAATCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACTATATATATATATGCATATATATATATGACAAAGAAAATCAAG  400

seq1  TATATAAATTGTAGACAGTTATCGATAGAACATTGATGAAATTTATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAATTGTAGACAGTTATCGATAGAACATTGATGAAATTTATTTTT  450

seq1  CTGATATTTTTATTTCTGACATGGTTACTAACACACATTAGCACTTAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATTTTTATTTCTGACATGGTTACTAACACACATTAGCACTTAATG  500

seq1  TTTATGTACTTGTGGTAATGTAAATATACTACATGAAGACTGAAGTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTACTTGTGGTAATGTAAATATACTACATGAAGACTGAAGTGTGA  550

seq1  ACACTATGCCCCTCCTTAGAAGTGGGAACAAAACACCCTTGGAAGGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTATGCCCCTCCTTAGAAGTGGGAACAAAACACCCTTGGAAGGAGTT  600

seq1  ACAGAGACAAAGTTTGGAGCTGAGATAAAAGGATGGACCATGTAGACACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACAAAGTTTGGAGCTGAGATAAAAGGATGGACCATGTAGACACT  650

seq1  ACCATATCCGGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATCCGGGGATCCATCCCATAATCAGCTTCCAAATGCTGACACCAT  700

seq1  TGCATACACTAGCAAGATTATGCTGAAAGGACCCTGATATAGCTGTCTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATACACTAGCAAGATTATGCTGAAAGGACCCTGATATAGCTGTCTCT  750

seq1  TGTCAGAGTATGCCTGGGCCTAGCAAACATAGAAGTGGACGCTCACAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGTATGCCTGGGCCTAGCAAACATAGAAGTGGACGCTCACAGTC  800

seq1  GGCTATTGGATGGATCACATGGCCCCCAATGAAGGAGCTAGAGAAAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTGGATGGATCACATGGCCCCCAATGAAGGAGCTAGAGAAAGTAC  850

seq1  CAAAGAAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAA  900

seq1  CTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGCATCAAAAGT  950
      |||||||||| |||||||||| |||||||||||||||||||||||||   
seq2  CTAACCAGTA-CCCGGAGCTC-TGACTCTAGCTGCATATGCATCAAA---  945

seq1  TGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACT  1000
       |  |||||||  ||||||||  |||||| ||||||  ||||||||||||
seq2  -GTGCTAGTCG--CATCACTG--AAGAGA-GCCCAT--GACACGCAAACT  987

seq1  TTATATGCCCCAGTACAGGGGAACGCCAGG  1030
      ||||||| ||||||||||||  ||||||||
seq2  TTATATG-CCCAGTACAGGG--ACGCCAGG  1014