BAC Information

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BAC

Clone NameB6Ng01-135G15
Chromosome2 (Build37)
Map Location 62,055,946 - 62,057,061
singlet/doubletsinglet
Overlap geneSlc4a10
Upstream geneTank, Psmd14, Tbr1, LOC100039274
Downstream geneDpp4, Gcg, Fap, Ifih1, Gca, Kcnh7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135G15.bB6Ng01-135G15.g
ACCDH935456DH935457
length1,1741,109
definitionDH935456|Mus musculus domesticus DNA, BAC clone: B6Ng01-135G15, 5' end.DH935457|Mus musculus domesticus DNA, BAC clone: B6Ng01-135G15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgagacataattcattttgtaaatgtgcc
actttttctgtatccattcctctattgagggacatctgcgttctttccag
ctcctggctattataaataaggctgctatgaacatagtggagcatgtgtc
cttgctatatgttgggacatcttttggatatatgcccagaagtggtataa
ctgggtccagttttctgaggaaccaccagactgatttccagagtggttgt
actagcttgcaatcccacgagcaatggaggagtgttcctcttttcccaca
tcctcgccaacatgtgttgtcacttgaggttttgatcttagccattctga
ctggtgtaagatagaatctcagtgcgtgttgatttgcatttccctgatga
ctaaggttgttgaatatttctttaggtgcttctaggccattttagtttcc
tcagttgagaattctttgtttatctctgtgccccattttaaaatagggtt
atttggttctctggagtctaacttcttgagttctttgtatatattggata
gtagccctctatcagatgtaggattagtaaagatcttttcccaatctgtt
ggttgctgttttttcctattgacagcgtcctttgtctaacagctttgcaa
ttttacgaggaggtcccatttgtcaattcttgatcctagagcataagcca
ttggtgttttgttcaggaaaatttcccctgtgcccatgagttctaggctc
tttcccactttgtcttctattagattcagtgtatctggtcttatgtggag
gacttgagctttcctataaggagataagaataggttgatttgcattcttc
tacatgctgacctccagttgaactaccatcatttgttgaaaatgctgtct
ttttaccactggatggttttagcttctttgtcaagatcaagtgaccatag
tgtgttggttcgtttctgggtcttcaatctattcgatgatctacttggct
gtttctgtaccaataccatgcagttttacactattggcttatagaacagc
ttgaggtcagggaggtgggattacctagaaaatttttttatgtggagaaa
ggttttgtctatccaggttttggtatccaagaatgagaaatgtccttcag
actttgagggatgatggagtcatt
gaattctttgaggattaagttgatgaaaatgcgccccacttgtattaaaa
tacacaaagcaaattcttctaccatttaacaacagattttttttctagag
aaattaactctgcatgtattatttaacactaactcagcttaacattttta
ggaagttttgttctttgattctgttaaataggaaggagctctataactcc
taaattatggttttgaaggcatcaagatactccctgataagacttccacc
tttaagacacttgaaaagaactagtaaatatatgtaaagcaattcatctt
aaggagacagaaactatcaaaactcaatgtttaatggctctagttattct
tttctctcaataatttttttgatttttgagattataatataattgcctca
tttccttattcaaatgtatggtcttttttttcttcattagttgttattac
atatatctatgtatgtaatgtatatgcaaatatattcataaatgatcaaa
tatgttgggagccgccctcacatttgccattataagatggcactgacagc
tgtgttctaagtagtaaacataatctgcacacgtgcaggggcagttttcc
cgccatgtgttctgcctttctcatgatgacaactgggccgatgggctgca
gccaatcagggagtaatacatcctaggcggaggataattctccttaaaag
ggacggggttttgccattctttttctctctcttctcttgctttctttctc
ttgctttcttgttcttgttctttttctctctcttgctctggctcttgctc
tcttgctctctggctcctgaagatgtaagcaataaagcttttgccgcaga
agattccggtttgttgcgtccttcctggccggtcgtgagacgcgtttaga
caaatataatctgctcagcatgtataatgttacttgcatgtacatttttt
ggtttgtctaattcatatggtcctttgcatttgcagctattgagagttca
gttgatgtgactatatactaatcttgagcccaatgcttttgaagatcaat
agaatgtgtttgggtggactaacacttttctgtggctacctctaacctca
acactttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_62055946_62057061
seq2: B6Ng01-135G15.g_67_1175 (reverse)

seq1  GTAAAGATGTTGATAGTTAGAGGTAG-CACAGAAAAGTGTTAGTACACCA  49
      |||||| ||||||  ||||||||||| ||||||||||||||||| |||| 
seq2  GTAAAG-TGTTGA-GGTTAGAGGTAGCCACAGAAAAGTGTTAGTCCACCC  48

seq1  AAACA-ATCTTATTGATGCTACAAAAGCATTTGGGCGTCAAGATTAGTAT  98
      ||||| ||  ||||||| || |||||||| |||||| |||||||||||||
seq2  AAACACATTCTATTGAT-CTTCAAAAGCA-TTGGGC-TCAAGATTAGTAT  95

seq1  ATAGTCACATCAACTGAACTCTTCAATAGACTGCAAATGCAAA-GACCAT  147
      ||||||||||||||||||||| ||||||| ||||||||||||| ||||||
seq2  ATAGTCACATCAACTGAACTC-TCAATAG-CTGCAAATGCAAAGGACCAT  143

seq1  ATGAATTAAGACAAACCAAAAAATGTACATGCAAGTAACATTATACATGC  197
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATT-AGACAAACCAAAAAATGTACATGCAAGTAACATTATACATGC  192

seq1  TGAGCAGATTATATTTGTCTTAAACGCGTTCTCACGACCGGCCAGGAAGG  247
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  TGAGCAGATTATATTTGTC-TAAACGCG-TCTCACGACCGGCCAGGAAGG  240

seq1  ACGCAACAAACCGGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAACAAACCGGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTT  290

seq1  CAGGAGCCAGAGAGCAAGAGAGCAAGAGCCAGAGCAAGAGAGAGAAAAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCAGAGAGCAAGAGAGCAAGAGCCAGAGCAAGAGAGAGAAAAAG  340

seq1  AACAAGAACAAGAAAGCAAGAGAAAGAAAGCAAGAGAAGAGAGAGAAAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAACAAGAAAGCAAGAGAAAGAAAGCAAGAGAAGAGAGAGAAAAA  390

seq1  GAATGGCAAAACCCCGTCCCTTTTAAGGAGAATTATCCTCCGCCTAGGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCAAAACCCCGTCCCTTTTAAGGAGAATTATCCTCCGCCTAGGAT  440

seq1  GTATTACTCCCTGATTGGCTGCAGCCCATCGGCCCAGTTGTCATCATGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTACTCCCTGATTGGCTGCAGCCCATCGGCCCAGTTGTCATCATGAG  490

seq1  AAAGGCAGAACACATGGCGGGAAAACTGCCCCTGCACGTGTGCAGATTAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGAACACATGGCGGGAAAACTGCCCCTGCACGTGTGCAGATTAT  540

seq1  GTTTACTACTTAGAACACAGCTGTCAGTGCCATCTTATAATGGCAAATGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTACTTAGAACACAGCTGTCAGTGCCATCTTATAATGGCAAATGT  590

seq1  GAGGGCGGCTCCCAACATATTTGATCATTTATGAATATATTTGCATATAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCGGCTCCCAACATATTTGATCATTTATGAATATATTTGCATATAC  640

seq1  ATTACATACATAGATATATGTAATAACAACTAATGAAGAAAAAAAAGACC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATACATAGATATATGTAATAACAACTAATGAAGAAAAAAAAGACC  690

seq1  ATACATTTGAATAAGGAAATGAGGCAATTATATTATAATCTCAAAAATCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTGAATAAGGAAATGAGGCAATTATATTATAATCTCAAAAATCA  740

seq1  AAAAAATTATTGAGAGAAAAGAATAACTAGAGCCATTAAACATTGAGTTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTATTGAGAGAAAAGAATAACTAGAGCCATTAAACATTGAGTTT  790

seq1  TGATAGTTTCTGTCTCCTTAAGATGAATTGCTTTACATATATTTACTAGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTTTCTGTCTCCTTAAGATGAATTGCTTTACATATATTTACTAGT  840

seq1  TCTTTTCAAGTGTCTTAAAGGTGGAAGTCTTATCAGGGAGTATCTTGATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCAAGTGTCTTAAAGGTGGAAGTCTTATCAGGGAGTATCTTGATG  890

seq1  CCTTCAAAACCATAATTTAGGAGTTATAGAGCTCCTTCCTATTTAACAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAAAACCATAATTTAGGAGTTATAGAGCTCCTTCCTATTTAACAGA  940

seq1  ATCAAAGAACAAAACTTCCTAAAAATGTTAAGCTGAGTTAGTGTTAAATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAGAACAAAACTTCCTAAAAATGTTAAGCTGAGTTAGTGTTAAATA  990

seq1  ATACATGCAGAGTTAATTTCTCTAGAAAAAAAATCTGTTGTTAAATGGTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGCAGAGTTAATTTCTCTAGAAAAAAAATCTGTTGTTAAATGGTA  1040

seq1  GAAGAATTTGCTTTGTGTATTTTAATACAAGTGGGGCGCATTTTCATCAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATTTGCTTTGTGTATTTTAATACAAGTGGGGCGCATTTTCATCAA  1090

seq1  CTTAATCCTCAAAGAATTC  1116
      |||||||||||||||||||
seq2  CTTAATCCTCAAAGAATTC  1109