BAC Information

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BAC

Clone NameB6Ng01-136D14
Chromosome2 (Build37)
Map Location 142,776,671 - 142,777,698
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136D14.b
ACCDH936055
length635
definitionDH936055|Mus musculus domesticus DNA, BAC clone: B6Ng01-136D14, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttgtaaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttaccttgcaaaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaagaatttttcccctgtgcccatatcttcgaggcttttccccac
tttctactctataagttttaatgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatacgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctactggtctgtctctataccagtaccatgtagtttttatcacaattgc
tctgtagtaaagctttaagtcaggcatggtgattc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776671_142777698
seq2: B6Ng01-136D14.b_44_611 (reverse)

seq1  TAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGA  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACAGACCAGTAGACCAATGGAATAGAATTGAAGACCCAGAAATGA  50

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  100

seq1  CAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  150

seq1  GTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTACTA  200
      ||||||||||||||||||| | ||||||||||||||||||||||||||||
seq2  GTTATCATGTAGAAGAATGCGTATCGATCCATACTTATCTCCTTGTACTA  200

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACATTA  250

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  300
      |||||||||||| ||||||||||||||||||| |||||||||||||||||
seq2  AAACTTATAGAGTAGAAAGTGGGGAAAAGCCTCGAAGATATGGGCACAGG  300

seq1  GGACAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  350
      ||| |||||| |||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAATTCTTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  350

seq1  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  400
      |||||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTTTGCAAGGTAAAAGAC  400

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  450

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  500

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  550
      ||||||||||||| | ||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGGACTTTACAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  550

seq1  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  600
       ||            ||| |||||    |||                   
seq2  GAA----------CTGAACAAAGA----ATTC------------------  568

seq1  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  650
                                                        
seq2  --------------------------------------------------  568

seq1  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  700
                                                        
seq2  --------------------------------------------------  568

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  750
                                                        
seq2  --------------------------------------------------  568

seq1  TGGGCACAGGGGAAAAATTCCTGAACAGAAGAGCAATGGCTTGTGCTGTA  800
                                                        
seq2  --------------------------------------------------  568

seq1  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  850
                                                        
seq2  --------------------------------------------------  568

seq1  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  900
                                                        
seq2  --------------------------------------------------  568

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  950
                                                        
seq2  --------------------------------------------------  568

seq1  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCATTAAAAA  1000
                                                        
seq2  --------------------------------------------------  568

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  1028
                                  
seq2  ----------------------------  568