BAC Information

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BAC

Clone NameB6Ng01-136K07
Chromosome2 (Build37)
Map Location 86,394,244 - 86,395,173
singlet/doubletsinglet
Overlap geneOlfr1080
Upstream geneOlfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805, Olfr1079
Downstream geneOlfr1081-ps1, Olfr1082, GA_x5J8B7W4CQV-18360-18784, Olfr1083, Olfr1084, Olfr1085, Olfr1086, Olfr1087, Olfr1088-ps1, Olfr1089, Olfr1090, Olfr1091-ps1, GA_x5J8B7W3Y5M-123838-124302, Olfr1093, Olfr141, Olfr1094, Olfr1095, Olfr1096-ps1, Olfr1097, Olfr1098, Olfr1099, Olfr1100, Olfr1101, Olfr1102, Olfr1103-ps1, Olfr1104, Olfr1105, Olfr1106, Olfr1107, GA_x5J8B7W3Y5M-419033-418135, Olfr1109, Olfr259, LOC668402, Olfr1110, Olfr1111, Olfr1112, LOC228238, Olfr1113, Olfr1114-ps1, LOC546767, Olfr1115, Olfr1521-ps1, LOC100041923, Olfr1117-ps1, GA_x5J8B7TY7N2-4-429, LOC668424, Olfr1118, Olfr1119-ps1, Olfr1120, Olfr1121, Olfr1122, LOC668432, Olfr1123, Olfr1125, Olfr1126, Pramel7, Pramel6, LOC668439, Olfr1127-ps1, Olfr253-ps1, Olfr1128, LOC100042038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136K07.bB6Ng01-136K07.g
ACCDH936362DH936363
length1,150931
definitionDH936362|Mus musculus domesticus DNA, BAC clone: B6Ng01-136K07, 5' end.DH936363|Mus musculus domesticus DNA, BAC clone: B6Ng01-136K07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaagtggctgagaagcatctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggataagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggataaagaggaacactcctccattgttggtg
ggattgcaagcttgaacaacccctctggaaatcagtctggcagttcctca
gaaaattagacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgttccaaccaataagaaggacacatgctccactat
gttcatagcagccttatttataatagccggaagctggaaagaacccagat
gccccttaacagaggaatggatacagaaaatttggtacatttacacaatg
gagtactactcaactattaaaaagaatgaatttatgaaattcctaggcaa
atgaatggacctggagggcatcatcctgtgtgaggtaacccaatcacaac
agaactctcatgatatgtactcactgataaatggatattagcccaaaaac
ttggaatacccaaaatataagatacaatttgcaaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggacactttgccccttcttagaattgaga
acaaaacacccatggaaagagttacagagacaaagtttggagctgagacg
aaaggatggaccatctcgagactgccatacctggggatccatcccataat
cagcccccaaacgctgacaccattgcatacactaggaagcttttgctgaa
aggaccctgatatagttgtctcttgtgagactatgctggggcctagcaga
cacagaagtggatgctcacagtcagctattggatggatcacagagcccca
gtggaggagctagagaaagtactcaaggagctggggagggatcgcaaccc
tataggtggaacagcatatgaactaaccataccccccgagctcatgcctc
tagctgcatagtatagaagatggcctagtggcactcgatgaatgccattt
atatgctcatacaggcatgccacgggccaagaatgagtgtggtagggatc

gaattcagtcacaactgttaggttgtgtttatccattctctatcagaaga
cctgtcatcagcagaggcagaaaaattgcaaatgtttcagaatttattat
atgaaggacaaaacaatcccaatgttagaaatcggggaacagaggtgagg
ggaagggataggggattttcagaggggaaactaggaaagggtttaacatt
tgaaattaaaagaaagaaagaaagaaaataagaaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaaatatctaataaaaataa
taaaaacaaagaaaaaaatatctaaaatttctgacttaatattttaaaat
attaatattgagccaggcatggtggcacacacctttaatctcagcacttg
ggtggcagaggcaggagaatttttgagttcgaggctagcctggtctaaag
agtgagttccaggacactcagggctacacagagaaacccagtcttgaaaa
accaaaaaaaaaaaaaaaaaaaaaaaaaaatcccaaaaaatccacaaaac
aaaacacacacacacacacacacacacacacacacacacacacacacaca
cacacaaacctattaatatttgtaatacaaaatatttactcttcgagatg
tacaaataaaaataagctaatttctttttcttattcatgaaatttctatt
gaaaaatactagagtcaatgtaaacatgaattgacactgtcttctaaggg
ttttcagccagttagtctggtaaacaccatatttatttcttataaagctc
taaatatattgatactaacaattcatatataaaagtagaaacttctgtta
tatattttactatttttttatttttatacacttaatagtgatacatgaat
aggtagatagtagatagatagattgatagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_86394244_86395173
seq2: B6Ng01-136K07.g_68_998

seq1  GAATTCAGTCACAACTGTTAGGTTGTGTTTATCCATTCTCTATCAGAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCACAACTGTTAGGTTGTGTTTATCCATTCTCTATCAGAAGA  50

seq1  CCTGTCATCAGCAGAGGCAGAAAAATTGCAAATGTTTCAGAATTTATTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCATCAGCAGAGGCAGAAAAATTGCAAATGTTTCAGAATTTATTAT  100

seq1  ATGAAGGACAAAACAATCCCAATGTTAGAAATCGGGGAACAGAGGTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGACAAAACAATCCCAATGTTAGAAATCGGGGAACAGAGGTGAGG  150

seq1  GGAAGGGATAGGGGATTTTCAGAGGGGAAACTAGGAAAGGGTTTAACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGATAGGGGATTTTCAGAGGGGAAACTAGGAAAGGGTTTAACATT  200

seq1  TGAAATTAAAAGAAAGAAAGAAAGAAAATAAGAAAGAAAGAAAGAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAAAGAAAGAAAGAAAGAAAATAAGAAAGAAAGAAAGAAAGAA  250

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATATCTAATAAAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAATATCTAATAAAAATAA  300

seq1  TAAAAACAAAGAAAAAAATATCTAAAATTTCTGACTTAATATTTTAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAAGAAAAAAATATCTAAAATTTCTGACTTAATATTTTAAAAT  350

seq1  ATTAATATTGAGCCAGGCATGGTGGCACACACCTTTAATCTCAGCACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATTGAGCCAGGCATGGTGGCACACACCTTTAATCTCAGCACTTG  400

seq1  GGTGGCAGAGGCAGGAGAATTTTTGAGTTCGAGGCTAGCCTGGTCTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAGAGGCAGGAGAATTTTTGAGTTCGAGGCTAGCCTGGTCTAAAG  450

seq1  AGTGAGTTCCAGGACACTCAGGGCTACACAGAGAAACCCAGTCTTGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTCCAGGACACTCAGGGCTACACAGAGAAACCCAGTCTTGAAAA  500

seq1  ACCAAAAAAAAAAAAAAAAAAAAAAAAAAATCCCAAAAAATCCACAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAAAAAAAAAAAAAAAAAAAAAAATCCCAAAAAATCCACAAAAC  550

seq1  AAAACACACACACACACACACACACACACACACACACACACACACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACACACACACACACACACACACACACACACACACACACACACACA  600

seq1  CACACAAACCTATTAATATTTGTAATACAAAATATTTACTCTTCGAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAACCTATTAATATTTGTAATACAAAATATTTACTCTTCGAGATG  650

seq1  TACAAATAAAAATAAGCTAATTTCTTTTTCTTATTCATGAAATTTCTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATAAAAATAAGCTAATTTCTTTTTCTTATTCATGAAATTTCTATT  700

seq1  GAAAAATACTAGAGTCAATGTAAACATGAATTGACACTGTCTTCTAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATACTAGAGTCAATGTAAACATGAATTGACACTGTCTTCTAAGGG  750

seq1  TTTTCAGCCAGTTAGTCTGGTAAACACCATATTTATTTCTTATAAAGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGCCAGTTAGTCTGGTAAACACCATATTTATTTCTTATAAAGCTC  800

seq1  TAAATAATATTGATACTAACAATTCATATATAAAAGTAGAAACTTCTGTT  850
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAT-ATATTGATACTAACAATTCATATATAAAAGTAGAAACTTCTGTT  849

seq1  ATATA-TTTACTATTTTTT--ATTTTATACACTTAATAGTGAATACATG-  896
      ||||| |||||||||||||   ||||||||||||||||||| ||||||| 
seq2  ATATATTTTACTATTTTTTTATTTTTATACACTTAATAGTG-ATACATGA  898

seq1  ATAGGTAGATAGGTAGATAGATAGATAGATAGAT  930
      ||||||||||| |||||||||||||| |||||||
seq2  ATAGGTAGATA-GTAGATAGATAGATTGATAGAT  931