BAC Information

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BAC

Clone NameB6Ng01-136O23
Chromosome2 (Build37)
Map Location 8,878,393 - 8,879,520
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672230
Downstream geneLOC100040710, LOC100040548, LOC100040566, Gata3, LOC100040768, 4930412O13Rik, Taf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136O23.bB6Ng01-136O23.g
ACCDH936579DH936580
length1,1601,110
definitionDH936579|Mus musculus domesticus DNA, BAC clone: B6Ng01-136O23, 5' end.DH936580|Mus musculus domesticus DNA, BAC clone: B6Ng01-136O23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaacaaagtatggagctgagatgaa
aggatggaccatgtagagactgccatatccagggatccaccccataatca
gcttccaaatgctgacaccattgcatacactagcaagattttactgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaaagtactcaaggagctaaaggatctttcaacccta
taggtgacacattatggacttacagtacccctgagctcttgactctagct
gcatatgtatcaaagatggcctagtcgcatccctgaaaaaaagtcattga
cacgcagacttgtgttctcgtacaagggaacgctcaggctcaatgggaat
tgattgctag
gaattcaaccttctcctgggctctaaggacagtagttattttgtaaaata
tagtatgattagataataaggttctctccatcctagagttagaatttttt
cctttgcagatatgtttttctctgaataaagatattgaaataatattata
tggtttattattctaatgctggataagaatattaaggtttttttttcatt
tttcataaaaatgggggacccctccttccttctgcctatttgtctttcct
tcttttcttaattccttccattcattttttttcttttattgtggaagatt
ctcctgtggccaagggtggtctgaaacctgttatgtagctgagattctcc
ttaagttcctggtcctcctgcctgctcttccagagcactggggtttcagg
tgtgctctaccatacttgggcagccttccagttttaattaactgacaaca
gatttaaggattatccctaaatttctgtggattgcctaaggctttcagaa
tgcaagtgtttacattcatagtcaggatgaaaaggaaactcagttagctg
gcttgcgtctataactgagtctaaccactctttctcattcttgaagttct
atgttagtaaaactaggtgtttttagggtaaacacctttatgtagcagca
aatatgtcttataaactctatctacattgcctaaacaatttgattttttt
tttttacttgaaaggactacactgaattaaattgattattaaaaactaaa
caccaggaaaataattatttatttaattatttacattttgagatacagtc
taattattcacctaagcttgcttcaaatcactgcaatcaccctacctcag
tctcctagaattataaaagtgagtcacactgcctggcccaagaaaaaaat
aaagtcaaatagcaaaagaatctgaggtaaaattacagttgaaatgacaa
atgatattttcagagatatttgataatataaaaataaattgtatgcagga
aagtgtcacacctataataaggatcagtttgttacagcagtaataaatgg
tggttattaggtatgttaatctctttcttctaagtcattgctatgcacag
aaagcacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8878393_8879520
seq2: B6Ng01-136O23.g_66_1175

seq1  GAATTCAACCTTCTCCTGGGCTCTAAGGACAGTAGTTATTTTGTAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTTCTCCTGGGCTCTAAGGACAGTAGTTATTTTGTAAAATA  50

seq1  TAGTATGATTAGATAATAAGGTTCTCTCCATCCTAGAGTTAGAATTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATGATTAGATAATAAGGTTCTCTCCATCCTAGAGTTAGAATTTTTT  100

seq1  CCTTTGCAGATATGTTTTTCTCTGAATAAAGATATTGAAATAATATTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCAGATATGTTTTTCTCTGAATAAAGATATTGAAATAATATTATA  150

seq1  TGGTTTATTATTCTAATGCTGGATAAGAATATTAAGGTTTTTTTTTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTATTATTCTAATGCTGGATAAGAATATTAAGGTTTTTTTTTCATT  200

seq1  TTTCATAAAAATGGGGGACCCCTCCTTCCTTCTGCCTATTTGTCTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAAAAATGGGGGACCCCTCCTTCCTTCTGCCTATTTGTCTTTCCT  250

seq1  TCTTTTCTTAATTCCTTCCATTCATTTTTTTTCTTTTATTGTGGAAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTTAATTCCTTCCATTCATTTTTTTTCTTTTATTGTGGAAGATT  300

seq1  CTCCTGTGGCCAAGGGTGGTCTGAAACCTGTTATGTAGCTGAGATTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGGCCAAGGGTGGTCTGAAACCTGTTATGTAGCTGAGATTCTCC  350

seq1  TTAAGTTCCTGGTCCTCCTGCCTGCTCTTCCAGAGCACTGGGGTTTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTCCTGGTCCTCCTGCCTGCTCTTCCAGAGCACTGGGGTTTCAGG  400

seq1  TGTGCTCTACCATACTTGGGCAGCCTTCCAGTTTTAATTAACTGACAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTACCATACTTGGGCAGCCTTCCAGTTTTAATTAACTGACAACA  450

seq1  GATTTAAGGATTATCCCTAAATTTCTGTGGATTGCCTAAGGCTTTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAGGATTATCCCTAAATTTCTGTGGATTGCCTAAGGCTTTCAGAA  500

seq1  TGCAAGTGTTTACATTCATAGTCAGGATGAAAAGGAAACTCAGTTAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGTGTTTACATTCATAGTCAGGATGAAAAGGAAACTCAGTTAGCTG  550

seq1  GCTTGCGTCTATAACTGAGTCTAACCACTCTTTCTCATTCTTGAAGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCGTCTATAACTGAGTCTAACCACTCTTTCTCATTCTTGAAGTTCT  600

seq1  ATGTTAGTAAAACTAGGTGTTTTTAGGGTAAACACCTTTATGTAGCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGTAAAACTAGGTGTTTTTAGGGTAAACACCTTTATGTAGCAGCA  650

seq1  AATATGTCTTATAAACTCTATCTACATTGCCTAAACAATTTGATTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTCTTATAAACTCTATCTACATTGCCTAAACAATTTGATTTTTTT  700

seq1  TTTTTACTTGAAAGGACTACACTGAATTAAATTGATTATTAAAAACTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTTGAAAGGACTACACTGAATTAAATTGATTATTAAAAACTAAA  750

seq1  CACCAGGAAAATAATTATTTATTTAATTATTTACATTTTGAGATACAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGAAAATAATTATTTATTTAATTATTTACATTTTGAGATACAGTC  800

seq1  TAATTATTCACCTAAGCTTGCTTCAAAATCACTGCAATCACCCTACCTCA  850
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAATTATTCACCTAAGCTTGCTTC-AAATCACTGCAATCACCCTACCTCA  849

seq1  GTCTCCTAGAATTATAAAAGTGAGTCACACTGCCTGGCCCAAGAAAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTAGAATTATAAAAGTGAGTCACACTGCCTGGCCCAAGAAAAAAA  899

seq1  TAAAAGTCAAAATAGCAAAAAGAATCTGAGGTAAAAATTACAAGTTGAAA  950
      | |||||| ||||||| ||||||||||||||| |||||||| ||||||||
seq2  T-AAAGTC-AAATAGC-AAAAGAATCTGAGGT-AAAATTAC-AGTTGAAA  944

seq1  TGACAAAATGAATATTTTCAGAGATATTTGATTAAATTATAAAAATAAAT  1000
      |||| ||||| |||||||||||||||||||||   | |||||||||||||
seq2  TGAC-AAATG-ATATTTTCAGAGATATTTGAT---AATATAAAAATAAAT  989

seq1  TGTATGCAAGAAAGTGTCACACCTATAATAAAGATCAGTTTGTTACAGCA  1050
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  TGTATGCAGGAAAGTGTCACACCTATAATAAGGATCAGTTTGTTACAGCA  1039

seq1  GTAATAAAATGTGTGTTATCTAGTTATGTTAATCTCTTCTTCCTCAAAAA  1100
      ||||||||  ||| ||||| ||| ||||||||||||||  | ||    ||
seq2  GTAATAAATGGTG-GTTAT-TAGGTATGTTAATCTCTTTCTTCT----AA  1083

seq1  GTCTATGCTAATGCACAGAAAGCACACA  1128
      |||  |||| ||||||||||||||||||
seq2  GTCATTGCT-ATGCACAGAAAGCACACA  1110