BAC Information

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BAC

Clone NameB6Ng01-137A21
Chromosome2 (Build37)
Map Location 53,190,213 - 53,191,326
singlet/doubletsinglet
Overlap genenone
Upstream geneNeb, LOC100041670, Arl5a, Cacnb4, OTTMUSG00000012638, Stam2, Fmnl2, Prpf40a, Arl6ip6
Downstream geneLOC666872, LOC666876, LOC207933, Rprm, LOC666913, LOC626563
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137A21.bB6Ng01-137A21.g
ACCDH936669DH936670
length1,2361,100
definitionDH936669|Mus musculus domesticus DNA, BAC clone: B6Ng01-137A21, 5' end.DH936670|Mus musculus domesticus DNA, BAC clone: B6Ng01-137A21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacaatgcttttcaaaaatcaatcatatgacccaactgtacca
ctcaatgacatctgcccaaaagactcaacatctcactccacagatacttg
cttagctatgttcactgctacactatcaacaatagcaaggaaatataaac
aacccaaatgtccttcatttgacaaatggatgattaaaatgtgtgacata
tgaatactattgaatattcttcagctgcaaataaaaatgaaactatgaac
tttgcaggtaaatggatgaaactagaaaagatcctattgagtgagataac
ctattgcacagagacaaacatcccatgttctctctcatctcagactctta
gctacaaatcttcagatgtaagtacataccctagagtaaccacaaaaccc
aagtaagaaaacagaactccttcagagcagagggtgtgagagaaatagag
aaggtacaagtgatttgatcataaaaatgggaaaaacagagggactctaa
ttagtgagaaagatggcaataaatatagaaggagagatgagcgtaaagta
acaacagcatatctagacagtcttaaggaatcacactattgactatctat
ataaaggcactatagtacatataaatcgtgtataaatgcacatctctagt
ttagatgatttatttaaacgtgggctaacatgctccttctaagagccaaa
gacagtctaacagaagccccaatacctagcttgagaagccctatttgagt
tgctggccatggttgttcaagcatcccccaaaactttatgggctattgct
tttgccctttataacctaccacaccccctgagattaaaaaaaataataac
ttcctattgctgaagacacaaagcactttaaatacaagacccaaagttcc
ctggactagaacttacctaaaagcctccaccctggagactagttctcatg
gtaccagaaggtgataatacaagctttcaaaggaccaaataaaccaacag
ttctacccagtataatgcctgtggacacaacaatgaacagtgtggacatt
accctaatgggtgcagtagtgtcttatactgtaataacaacatctcttaa
ttgactaaaactcacctcacagaaggaatctgcggaatctaggatctatt
ccagctactcaagactatggaagtctagaacttgatggaaacatggcaac
gagttcagaaattcacggaaagagcctacgattata
gaattcaaccttaagaggataaggaaacttgtagaagctctcccgattcc
tgccatggctttttggagagtgtattgcaatttcatgtggagggaaaaag
acacctcataaacaaagaaatggtaagcaactcggatgataatttagtga
gggtatggtgcttatacaggaaaagtagggagaactgagcatgcgtgtct
aggagggattgaaggtgttcctgtggaaaacagaattgtcagaggactgg
ggatggagaaggcatttaaacaaatattcaagaggggaaggtcagtcttg
tggctgtgtgaagaatcatgctaagcagagaaaagagccagtaaaaaggc
ctgaggaggactctggccattgcataccctcacacagttcccttcaagtt
tctgtgcatagcacagcagctaccacaggcctggtataggatgcagcatt
tgcagactacactcatttgtgtatcactgtggtaaagtttataatatccc
cataccatttatactggtatttaattaggtttatatttaattaattcccc
tttcactcaagtacacacatttttaaattgaaaatacatttttcatataa
tatattttgattatggtttcccctcaactcttctcagatctttctcacct
acccaaatccatagcttttctttttcctctcattagaattcaaacagaca
tctaaaaaaataataaaatgaaatactatgaaacaaaaacaaagcagaag
tacacatctttgataatgagttttgtggtaacaaatgactgttactttga
tttgagtatgacttcggcatctccagtacttcatgaatttagtttaacca
tccactgttaagtattaagagagtaggaacttaatgtgactatgatgtta
gacctggagtcttgtgaagtcaaatatatgagatggtataatgccataga
atgattgaatcctgatggctttatgaggagagtgctcaaagagaagtacc
aaacacatgtacccccacttttgctagtgatgtcgtgtaccacatcaaga
ctctgtcacactatgttaaacaataatgactccccacctcttttattaga

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_53190213_53191326
seq2: B6Ng01-137A21.g_64_1163

seq1  GAATTCAACCTTAAGAGGATAAGGAAACTTGTAGAAGCTCTCCCGATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTTAAGAGGATAAGGAAACTTGTAGAAGCTCTCCCGATTCC  50

seq1  TGCCATGGCTTTTTGGAGAGTGTATTGCAATTTCATGTGGAGGGAAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGGCTTTTTGGAGAGTGTATTGCAATTTCATGTGGAGGGAAAAAG  100

seq1  ACACCTCATAAACAAAGAAATGGTAAGCAACTCGGATGATAATTTAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCATAAACAAAGAAATGGTAAGCAACTCGGATGATAATTTAGTGA  150

seq1  GGGTATGGTGCTTATACAGGAAAAGTAGGGAGAACTGAGCATGCGTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGGTGCTTATACAGGAAAAGTAGGGAGAACTGAGCATGCGTGTCT  200

seq1  AGGAGGGATTGAAGGTGTTCCTGTGGAAAACAGAATTGTCAGAGGACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGATTGAAGGTGTTCCTGTGGAAAACAGAATTGTCAGAGGACTGG  250

seq1  GGATGGAGAAGGCATTTAAACAAATATTCAAGAGGGGAAGGTCAGTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGAAGGCATTTAAACAAATATTCAAGAGGGGAAGGTCAGTCTTG  300

seq1  TGGCTGTGTGAAGAATCATGCTAAGCAGAGAAAAGAGCCAGTAAAAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGTGAAGAATCATGCTAAGCAGAGAAAAGAGCCAGTAAAAAGGC  350

seq1  CTGAGGAGGACTCTGGCCATTGCATACCCTCACACAGTTCCCTTCAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAGGACTCTGGCCATTGCATACCCTCACACAGTTCCCTTCAAGTT  400

seq1  TCTGTGCATAGCACAGCAGCTACCACAGGCCTGGTATAGGATGCAGCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCATAGCACAGCAGCTACCACAGGCCTGGTATAGGATGCAGCATT  450

seq1  TGCAGACTACACTCATTTGTGTATCACTGTGGTAAAGTTTATAATATCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACTACACTCATTTGTGTATCACTGTGGTAAAGTTTATAATATCCC  500

seq1  CATACCATTTATACTGGTATTTAATTAGGTTTATATTTAATTAATTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCATTTATACTGGTATTTAATTAGGTTTATATTTAATTAATTCCCC  550

seq1  TTTCACTCAAGTACACACATTTTTAAATTGAAAATACATTTTTCATATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTCAAGTACACACATTTTTAAATTGAAAATACATTTTTCATATAA  600

seq1  TATATTTTGATTATGGTTTCCCCTCAACTCTTCTCAGATCTTTCTCACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTGATTATGGTTTCCCCTCAACTCTTCTCAGATCTTTCTCACCT  650

seq1  ACCCAAATCCATAGCTTTTCTTTTTCCTCTCATTAGAATTCAAACAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAATCCATAGCTTTTCTTTTTCCTCTCATTAGAATTCAAACAGACA  700

seq1  TCTAAAAAAATAATAAAATGAAATACTATGAAACAAAAACAAAGCAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAAAAATAATAAAATGAAATACTATGAAACAAAAACAAAGCAGAAG  750

seq1  TACACATCTTTGATAATGAGTTTTGTGGTAACAAATGACTGTTACTTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATCTTTGATAATGAGTTTTGTGGTAACAAATGACTGTTACTTTGA  800

seq1  TTTGAGTATGACTTCGGCATCTCCAGTACTTCATGAATTTAGTTTAACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTATGACTTCGGCATCTCCAGTACTTCATGAATTTAGTTTAACCA  850

seq1  TCCACTGTTAAGTATTAAGAGAGTAGGAACTTAATGTGACTATGATGTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTGTTAAGTATTAAGAGAGTAGGAACTTAATGTGACTATGATGTTA  900

seq1  GACCTGGAGTCTTTGTGAAGTCAAATATATGAGGATGGTATAATGCCAAT  950
      ||||||||||| |||||||||||||||||||| |||||||||||||| ||
seq2  GACCTGGAGTC-TTGTGAAGTCAAATATATGA-GATGGTATAATGCC-AT  947

seq1  AGAATGATTGAATCCTGATGGCTTTATGAAGGGAGAGTGCTCAAAAGAGA  1000
      |||||||||||||||||||||||||||||  ||||||||||| |||||||
seq2  AGAATGATTGAATCCTGATGGCTTTATGA--GGAGAGTGCTC-AAAGAGA  994

seq1  AGTACCCAAACACATGTACCCCCCACCTTTTGCTAAGTGATGTCGTGTAC  1050
      |||| ||||||||||||||||||   |||||||| |||||||||||||||
seq2  AGTA-CCAAACACATGTACCCCC--ACTTTTGCT-AGTGATGTCGTGTAC  1040

seq1  CACATCAGGACTCTGTCACACTATGTTATACAATAAATGCACTCCCCACC  1100
      ||||||| |||||||||||||||||||| ||||| |||| ||||||||||
seq2  CACATCAAGACTCTGTCACACTATGTTAAACAAT-AATG-ACTCCCCACC  1088

seq1  TCTTTTTTATTAGA  1114
      ||  ||||||||||
seq2  TC--TTTTATTAGA  1100