BAC Information

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BAC

Clone NameB6Ng01-137B10
Chromosome2 (Build37)
Map Location 46,091,336 - 46,092,462
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042661, LOC100041337, LOC666604
Downstream geneLOC383690
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137B10.bB6Ng01-137B10.g
ACCDH936695DH936696
length1,2211,110
definitionDH936695|Mus musculus domesticus DNA, BAC clone: B6Ng01-137B10, 5' end.DH936696|Mus musculus domesticus DNA, BAC clone: B6Ng01-137B10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttttctctgtaccgcatctggaataacaaaaattctagg
atagcaaaaactattctcaacaataaaagaagttctggtggaatcaccat
ccctgacctcacggtgtactacagactaattgtgctaaaaactacatggt
attggtacagtggcatacaggtagatcaatggaatagaactgaagaccca
gaaatgaacccatacacctatggtcacttgatctttgacaaaggagctaa
aaccattcaatggaaaaaagacagcattttcaacaaacgatgctggctca
actggcagttagcatgtagaagaatgcaaatagatccattttcatctcct
tgtacaatgctcaagtacaagtgtattaatgacctccacataaaaccaga
tacactgaaacttatagaggagaaagtggggaagagcctcgaacatatag
gcatagggggaaaattcttgaacagaacaccaatggcttttgctggaaga
tcaagaattgacaaatgggagctcataaaattgctaaggttctgtaaggc
taaggaaactatcaataagacaaaaaaggcatccaacagattggcaaaat
atctttaccaatcctacatcccagagagggctaattgcgggaagtaggtg
aggccacatgggcctagatggcgccctggcccattgccaggccctgtgaa
ccccacatgtttactgccttgcccaagcatgtgcagtgaggctgcatgca
tgagctgcttgccaggctgaactgtgcctcatgatctggacctgtcagcc
tattggtgaccgatctgagcgcgtgcctggagctgtgtgaattctgattg
gatgaggtggggtggagctagatgaggtcagtgggcgagagtataggaga
gagtgcttgctgcagaaggaaaagtggagagctgctggggaagagagctg
taggggaaagctacagtaagagtgctgcgtgacccttcttgctgtctgtg
tgtctgtctctctggagaaaggactgcgacgcttaattccataattacga
gaaacttcaggaggtggactccagagaatcgattacctattaaggtcagg
tacaaactaacaagaatcccacctgaaaattcatactggcatggataggt
cagcgtccttggcttatctccggtacatctaactgacagttggcctttaa
taacctgcacgaattaccacc
gaattcagtaggtttttaaaatttttaatataactagaaattccaagtgt
gtatccagagatcacttttcagagtcttgggcaggcttccctgaagcccg
ctgagctcaggctaactgaaatcaaaacaatattccatgctataaaatat
ttccctaattagtattataagaaataagcaaaataggtagtacaatagca
agaccatggtctctagacagaagaaacaaatatcaaatgctgtggagtta
aaaatgactttacagttttggaaattttaattttgtagtttcagtgcctt
tgagtatgaagaaaactttatgctatttaagatcatatttcaaaacctgt
tctttccacatagtccagaccctctcattaataattttttgcattcctat
aatgactgttataaatccctaagaacattaacttggcatcttggcatttg
tttctcctaccagattgtgggaagatatggggttgatcaggatacaggga
ctggttgaagtgttccggtccagagatttccaggtattggaggtttaatg
tcctgtgttatcatgttcttcaaatgattcttagtcattttatgagggct
aagatgaaaggtacaggcagacagctaagaaagaagcaagtctccccatg
gtttatacaacagtagaatacaaaccaataaaacgggtatcagaatgcag
agagataagttaaggtctttatgcccaagactggcagattaaagtgacat
gataaagcaaaggagccaacagttgtctaaaataacaacaaaaaacccca
accagagaaatagtggatccttaggaactgaacattggcgggatacgaat
ttgaactggtctgagcaagtgtagctttctatgattcttactaacacgta
agtattgatagaaacctgaaagtatgttatgccagtaatctaaagcaata
gtggctctggcaaattgtattttactacatgtttctaagctgggttttgc
accagattgcagacaataggaattacaacttataaaagatagaataacta
gaacttcatctaatataccgactttttcatgggatatctcattaaacaaa
ttttatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_46091336_46092462
seq2: B6Ng01-137B10.g_68_1177 (reverse)

seq1  ATATATAAAATTTGTCTAAATGGAGATTATCCCAATGAAAAAATACAGTA  50
      ||||||||||||||| |||   |||| |||||| |||||||| | | |||
seq2  ATATATAAAATTTGTTTAA--TGAGA-TATCCC-ATGAAAAAGT-CGGTA  45

seq1  TATATTTAGATGTATGTTCTAGTGTATTCATATCTTTTTAATAAGTTTGT  100
      ||   ||||||| | |||||||| ||||| ||||||||  ||||| ||||
seq2  TA---TTAGATG-AAGTTCTAGT-TATTC-TATCTTTT--ATAAG-TTGT  86

seq1  AATTTCTTATTTGTCTGCATTCTGGTGCAAAACCCAGCTAAGAAACATGT  150
      |||| ||   ||||||||| ||||||||||||||||||| ||||||||||
seq2  AATTCCT--ATTGTCTGCAATCTGGTGCAAAACCCAGCTTAGAAACATGT  134

seq1  AGTAAAATACAATTTGCCAGAGCCACTTATTGCTTTAGATTACTGGCATA  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTAAAATACAATTTGCCAGAGCCAC-TATTGCTTTAGATTACTGGCATA  183

seq1  ACATACTTTCAGGTTTCTATCAATACTTACGTGTTAGTAAGAATCATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTTTCAGGTTTCTATCAATACTTACGTGTTAGTAAGAATCATAGA  233

seq1  AAGCTACACTTGCTCAGACCAGTTCAAATTCGTATCCCGCCAATGTTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACACTTGCTCAGACCAGTTCAAATTCGTATCCCGCCAATGTTCAG  283

seq1  TTCCTAAGGATCCACTATTTCTCTGGTTGGGGTTTTTTGTTGTTATTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAGGATCCACTATTTCTCTGGTTGGGGTTTTTTGTTGTTATTTTA  333

seq1  GACAACTGTTGGCTCCTTTGCTTTATCATGTCACTTTAATCTGCCAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACTGTTGGCTCCTTTGCTTTATCATGTCACTTTAATCTGCCAGTCT  383

seq1  TGGGCATAAAGACCTTAACTTATCTCTCTGCATTCTGATACCCGTTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATAAAGACCTTAACTTATCTCTCTGCATTCTGATACCCGTTTTAT  433

seq1  TGGTTTGTATTCTACTGTTGTATAAACCATGGGGAGACTTGCTTCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTGTATTCTACTGTTGTATAAACCATGGGGAGACTTGCTTCTTTCT  483

seq1  TAGCTGTCTGCCTGTACCTTTCATCTTAGCCCTCATAAAATGACTAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGTCTGCCTGTACCTTTCATCTTAGCCCTCATAAAATGACTAAGAA  533

seq1  TCATTTGAAGAACATGATAACACAGGACATTAAACCTCCAATACCTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGAAGAACATGATAACACAGGACATTAAACCTCCAATACCTGGAA  583

seq1  ATCTCTGGACCGGAACACTTCAACCAGTCCCTGTATCCTGATCAACCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGACCGGAACACTTCAACCAGTCCCTGTATCCTGATCAACCCCA  633

seq1  TATCTTCCCACAATCTGGTAGGAGAAACAAATGCCAAGATGCCAAGTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCCACAATCTGGTAGGAGAAACAAATGCCAAGATGCCAAGTTAA  683

seq1  TGTTCTTAGGGATTTATAACAGTCATTATAGGAATGCAAAAAATTATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTAGGGATTTATAACAGTCATTATAGGAATGCAAAAAATTATTAA  733

seq1  TGAGAGGGTCTGGACTATGTGGAAAGAACAGGTTTTGAAATATGATCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGGTCTGGACTATGTGGAAAGAACAGGTTTTGAAATATGATCTTA  783

seq1  AATAGCATAAAGTTTTCTTCATACTCAAAGGCACTGAAACTACAAAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCATAAAGTTTTCTTCATACTCAAAGGCACTGAAACTACAAAATTA  833

seq1  AAATTTCCAAAACTGTAAAGTCATTTTTAACTCCACAGCATTTGATATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCCAAAACTGTAAAGTCATTTTTAACTCCACAGCATTTGATATTT  883

seq1  GTTTCTTCTGTCTAGAGACCATGGTCTTGCTATTGTACTACCTATTTTGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTCTGTCTAGAGACCATGGTCTTGCTATTGTACTACCTATTTTGC  933

seq1  TTATTTCTTATAATACTAATTAGGGAAATATTTTATAGCATGGAATATTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTTATAATACTAATTAGGGAAATATTTTATAGCATGGAATATTG  983

seq1  TTTTGATTTCAGTTAGCCTGAGCTCAGCGGGCTTCAGGGAAGCCTGCCCA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTCAGTTAGCCTGAGCTCAGCGGGCTTCAGGGAAGCCTGCCCA  1033

seq1  AGACTCTGAAAAGTGATCTCTGGATACACACTTGGAATTTCTAGTTATAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGAAAAGTGATCTCTGGATACACACTTGGAATTTCTAGTTATAT  1083

seq1  TAAAAATTTTAAAAACCTACTGAATTC  1127
      |||||||||||||||||||||||||||
seq2  TAAAAATTTTAAAAACCTACTGAATTC  1110