BAC Information

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BAC

Clone NameB6Ng01-137D02
Chromosome2 (Build37)18 (Build37)
Map Location 142,776,470 - 142,777,00637,159,790 - 37,160,906
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137D02.bB6Ng01-137D02.g
ACCDH936773DH936774
length9861,120
definitionDH936773|Mus musculus domesticus DNA, BAC clone: B6Ng01-137D02, 5' end.DH936774|Mus musculus domesticus DNA, BAC clone: B6Ng01-137D02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(142,776,470 - 142,777,006)(37,159,790 - 37,160,906)
sequence
gaattctttgttcagttctgagccccatttttttttcccattttttatta
ggtatttagctcatttacatttccaatgctataccaaaagtcccccttac
ccacccacccccactcccctacccacccactccccccctttggccctggc
gttcccctgtaccggggcacacaaagtctgcgtgtccaatgggcctctct
ttccagtgatggccgactaggccatcttttgatacatatctgagccccat
tttttaatggggttatttgattttctgaagtccaccttcttgagttcttt
atatatattggatattagtcccctatctgatttaggataggtaaagatcc
tttcccaatctgttggtggtctttttgtcttactgacggtgtcttttgcc
ttgcagaaactttggagtttcattaggtcccatttgtcaattctcgatct
tacagtacaagccattgctgttctgttcaggaattttccccctgtgccca
tatcttcaaggcttttcccgctttctcctctataagtttcagtgtctctg
gttttatgtgaagttccttgatccacttagatttgaccttagtacaagga
gataagtatggatcgattcacattcttctacacaataacaaccagttgtg
ccagcaccaattgttgaaaatgctgtctttcttccactggatggttttag
ctcccttgtcgaagatcaagtgaccataggtgtgtgggttcatttctggg
tcttcaattctattccattggtctacttgtctgtctctataccagtacca
tgcagtttttatacaatttgctctgtagtaaaagcttaggtcaggcatgg
tgattccaccagaggttctttatccttgagaagacttttgctatcctatg
ttttttgttattcagatgaattggcaaattgcctccttctattcgttgag
aattgagttggaattttgatagggattgcattgaat
ctatgtagaccgagcagagaccttcttgcctcagtctcctgcatgctggg
attaagagtgtgcatcaccaaccctggagcgatgacgtctttaagaataa
atttcagggacttttttcactctcatcgtaacacttttctcaaagggaat
gagctaatacgtgaataccacaagttgcctaggcttttctaataaaagag
accattgtgagggttgttgaataaaattatgccaacaactataaaacatc
ttcctctaaaagtgagtgattcatactgaaacaaggaccagtgctactga
tacaaaaaggaatcaaataaaataaataaaataaataaaataaaaaataa
aaaataaaaaaaacgttaccactgaactgacagtctaccttgctgcagta
aaaacaaatgcagttagagaatataaagtcttgttctatgatatacatga
gggacagaataaaatgctaaacattctcaccaaaaggaaaagggaaaaga
agttcagcatttgttaatgcaattggatcaaatcaaattttaacttgaaa
agtaaatcacggagcttacaaatatttgtaacacgaagacagcatatgaa
aataaaacttactgcaccctgaacacaagttctattggagaaagattatg
ggttcataatgcttatatttaaattacaagttttaggcagaggtttgcac
actagtgcctagatggacatcttaaaaccaattgctggaataaactatat
tccaacgcattgttaaaaatacttgtgcatagtggtactcagacaaaaaa
aaatacatctgggacacacattttgtcataaaataaaatgagacagaaaa
tgtattttcatcaagcaagatgagagtaaaaagtaatagcccacctttcc
gggcacgtctcctccaacagaatgactttccattcccacttcggccactg
ggcaaggtgtaggactggggcttaaaagcccatgaggtcgttttggccga
accctctcctgagcatactcgctgcctgtctctgcttgtgagtatgacaa
gtccccacagcgctggagcacaccaagtgggcttcccagcccgcaactcg
cctgcatgggcacatgctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776470_142777006
seq2: B6Ng01-137D02.b_502_1033 (reverse)

seq1  ATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAG  50
      ||||||||||||||| ||||||||||||||||||||| |||||||| |||
seq2  ATTCAATGCAATCCCTATCAAAATTCCAACTCAATTC-TCAACGAA-TAG  48

seq1  AAGGA-GCAATTTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGC  99
      ||||| ||||||||| ||||||||| |||||||||||||| |||||||||
seq2  AAGGAGGCAATTTGCCAATTCATCT-GAATAACAAAAAACATAGGATAGC  97

seq1  AAAAAGTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTG  149
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  -AAAAGTCTTCTCAAGGAT-AAAGAACCTCTGGTGGAATCACCATGCCTG  145

seq1  ACCTAAAGCTTTACTACAGAGC-AATTGTGATAAAAACTGCATGGTACTG  198
      ||||||   ||||||||||||| |||||| ||||||||||||||||||||
seq2  ACCTAAGCTTTTACTACAGAGCAAATTGT-ATAAAAACTGCATGGTACTG  194

seq1  GTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGAGACAGACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAAA  244

seq1  TGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACC  294

seq1  ATCCAGAGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTG  348
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTG  344

seq1  GTTGTTATCATGTAGAAGAATGGGAATCGATCCATACTTATCTCCTTGTA  398
      ||||||||  |||||||||||| |||||||||||||||||||||||||||
seq2  GTTGTTATTGTGTAGAAGAATGTGAATCGATCCATACTTATCTCCTTGTA  394

seq1  CTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACA  444

seq1  CTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAC  498
      ||||||||||||||||||||||  ||||||||||||||||||||||||||
seq2  CTGAAACTTATAGAGGAGAAAG-CGGGAAAAGCCTTGAAGATATGGGCAC  493

seq1  AGGGGACAAATTCCTGAACAGAACAGCAATGGCTTGTGC  537
      |||||  |||||||||||||||||||||||||||||| |
seq2  AGGGGGAAAATTCCTGAACAGAACAGCAATGGCTTGTAC  532

seq1: chr18_37159790_37160906
seq2: B6Ng01-137D02.g_77_1196 (reverse)

seq1  TCAGC-TGTGCCCATGCAGGCTGGGTGCGGGCTTGGGAAGCCCACTCTGG  49
      ||||| |||||||||||||||  | ||||||| ||||||||||||| |||
seq2  TCAGCATGTGCCCATGCAGGCGAGTTGCGGGC-TGGGAAGCCCACT-TGG  48

seq1  TGTGCTCAAGCGCTGTGGGGACCTGGTCATACTCAC-AGCAGAGACA-GC  97
      ||||||| ||||||||||||| || ||||||||||| |||||||||| ||
seq2  TGTGCTCCAGCGCTGTGGGGA-CTTGTCATACTCACAAGCAGAGACAGGC  97

seq1  AGCGAGTATGCTCAGGAGAGGGTCCGCCCAAAACCGACCTCAT-GGCTTT  146
      ||||||||||||||||||||||| || |||||| ||||||||| ||||||
seq2  AGCGAGTATGCTCAGGAGAGGGTTCGGCCAAAA-CGACCTCATGGGCTTT  146

seq1  T-AGCCCCAGTCTTACACCTTGCCCAGTGGCCGAAGTGGGAATGGAAAGT  195
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TAAGCCCCAGTCCTACACCTTGCCCAGTGGCCGAAGTGGGAATGGAAAGT  196

seq1  CATTCTGTTGGAGGAGACGTGCCCGGAAAGGTGGGCTATTACTTTTTACT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTTGGAGGAGACGTGCCCGGAAAGGTGGGCTATTACTTTTTACT  246

seq1  CTCATCTTGCTTGATG-AAATACATTTTCTGTCTCATTTTATTTTATGAC  294
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCATCTTGCTTGATGAAAATACATTTTCTGTCTCATTTTATTTTATGAC  296

seq1  -AAATGTGTGTCCCAGATGTATTTTTTTTTGTCTGAGTACCACTATGCAC  343
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGTGTCCCAGATGTATTTTTTTTTGTCTGAGTACCACTATGCAC  346

seq1  AAGTATTTTTAACAATGCGTTGGAATATAGTTTATTCCAGCAATTGGTTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTTTAACAATGCGTTGGAATATAGTTTATTCCAGCAATTGGTTT  396

seq1  TAAGATGTCCATCTAGGCACTAGTGTGCAAACCTCTGCCTAAAACTTGTA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATGTCCATCTAGGCACTAGTGTGCAAACCTCTGCCTAAAACTTGTA  446

seq1  ATTTAAATATAAGCATTATGAACCCATAATCTTTCTCCAATAGAACTTGT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATATAAGCATTATGAACCCATAATCTTTCTCCAATAGAACTTGT  496

seq1  GTTCAGGGTGCAGTAAGTTTTATTTTCATATGCTGTCTTCGTGTTACAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGGTGCAGTAAGTTTTATTTTCATATGCTGTCTTCGTGTTACAAA  546

seq1  TATTTGTAAGCTCCGTGATTTACTTTTCAAGTTAAAATTTGATTTGATCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAAGCTCCGTGATTTACTTTTCAAGTTAAAATTTGATTTGATCC  596

seq1  AATTGCATTAACAAATGCTGAACTTCTTTTCCCTTTTCCTTTTGGTGAGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCATTAACAAATGCTGAACTTCTTTTCCCTTTTCCTTTTGGTGAGA  646

seq1  ATGTTTAGCATTTTATTCTGTCCCTCATGTATATCATAGAACAAGACTTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAGCATTTTATTCTGTCCCTCATGTATATCATAGAACAAGACTTT  696

seq1  ATATTCTCTAACTGCATTTGTTTTTACTGCAGCAAGGTAGACTGTCAGTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTCTAACTGCATTTGTTTTTACTGCAGCAAGGTAGACTGTCAGTT  746

seq1  CAGTGGTAACGTTTTTTTTATTTTTTATTTTTTATTTTATTTATTTTATT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTAACGTTTTTTTTATTTTTTATTTTTTATTTTATTTATTTTATT  796

seq1  TATTTTATTTGATTCCTTTTTGTATCAGTAGCACTGGTCCTTGTTTCAGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTGATTCCTTTTTGTATCAGTAGCACTGGTCCTTGTTTCAGT  846

seq1  ATGAATCACTCACTTTTAGAGGAAGATGTTTTATAGTTGTTGGCATAATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCACTCACTTTTAGAGGAAGATGTTTTATAGTTGTTGGCATAATT  896

seq1  TTATTCAACAACCCTCACAATGGTCTCTTTTATTAGAAAAGCCTAGGCAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCAACAACCCTCACAATGGTCTCTTTTATTAGAAAAGCCTAGGCAA  946

seq1  CTTGTGGTATTCACGTATTAGCTCATTCCCTTTGAGAAAAGTGTTACGAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGTATTCACGTATTAGCTCATTCCCTTTGAGAAAAGTGTTACGAT  996

seq1  GAGAGTGAAAAAAGTCCCTGAAATTTATTCTTAAAGACGTCATCGCTCCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGAAAAAAGTCCCTGAAATTTATTCTTAAAGACGTCATCGCTCCA  1046

seq1  GGGTTGGTGATGCACACTCTTAATCCCAGCATGCAGGAGACTGAGGCAAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGTGATGCACACTCTTAATCCCAGCATGCAGGAGACTGAGGCAAG  1096

seq1  AAGGTCTCTGCTCGGTCTACATAG  1117
      ||||||||||||||||||||||||
seq2  AAGGTCTCTGCTCGGTCTACATAG  1120