BAC Information

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BAC

Clone NameB6Ng01-137E15
Chromosome2 (Build37)
Map Location 9,565,727 - 9,750,067
singlet/doubletdoublet
Overlap geneLOC100040566
Upstream geneLOC100040710, LOC100040548
Downstream geneGata3, LOC100040768, 4930412O13Rik, Taf3, Atp5c1, Kin, Itih2, Itih5, Sfmbt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137E15.bB6Ng01-137E15.g
ACCDH936845DH936846
length4171,017
definitionDH936845|Mus musculus domesticus DNA, BAC clone: B6Ng01-137E15, 5' end.DH936846|Mus musculus domesticus DNA, BAC clone: B6Ng01-137E15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,565,727 - 9,566,149)(9,749,037 - 9,750,067)
sequence
aagtaccttgagtgtctatttgagccttctgtgaagaaagcctggcaaag
taagaaggtgatcagaaagaaacggtcctgggttggttggtcttttgctt
tttgttttgttttgttttgttttgttttgttttgttttgttttgttttgt
tttaaagctttatggggaaagaaagtagtccgtcctgttatgtttataaa
aagataaggagagaaggaatatgattggtggatgtgcagtcaggtgtggg
ggaaggggtgcctacatgggtccatgctggggcatccctgtcccctgagg
gaccagccacacaacacagtatagtatagaacagactttattcagggcat
gggaaggggagttcagaggatagtagagacagagaaagggagagagagag
agagagagagagagaga

gaattctccttgttccttctaggaagaaaaagcacccccccccccacata
caccacagtcttattgtgattcaggttggctaaggctttgagagtccccc
aagttagagcattggggtggtatttaaaagtaacagctcaaactgtgagg
gcttctggggccaggctgccagctccaggagaccaatggctggctgtccc
tggctgtgttggtatcgtctcagtccaactgggctgggcactgggcctca
gtgatcactgtgggagtgggtcacacaggagtggatgtcaactcgctcag
acactcagctgctggagggtggaaagaatgcagggtctctcacaggtgag
ggagcattttaacttcctagaaaaatcctgaggcagctgggcagattctt
ctcaggaaaatgggtttgtaggaaggcagtgaaggaggactcagcataga
actctaggtttctgttctaagacttggcagcagagggccctccctagcca
ccgagcctggggggcagaagggagtggctgggcacctccctaaccaccca
ctcccacttggagcaaaaaagggagaggccagagacacctgcatttgtgt
cttgcctcaggagaaaagccagagacacctgctgagacggcttcaccccc
ccagaagcaggagggaggggctatctcgagctgctgcttgcctgccccag
taggggagctgggaacccaaagatgtttgccaaggtttagagaaatcagg
cacagacctcagggtgctagctatttccctggggaaacttttccagatct
ttttgtgtttgattcagagtcttgtgtagcccaagttggcctcaaacttt
ctgggcagcagagactttcatgctgtgattacaagtgtgtacaattgggc
tcattattcaagggctgttttctcttcacatgctgggaatggactggaac
ttcatgcatgcatgacgtaagcacagccttatccagccctggcctggaag
tcttgctcattcagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_9565727_9566149
seq2: B6Ng01-137E15.b_49_471

seq1  GAATTCAAGTACCTTGAGTGTCTATTTGAGCCTTCTGTGAAGAAAGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTACCTTGAGTGTCTATTTGAGCCTTCTGTGAAGAAAGCCTG  50

seq1  GCAAAGTAAGAAGGTGATCAGAAAGAAACGGTCCTGGGTTGGTTGGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTAAGAAGGTGATCAGAAAGAAACGGTCCTGGGTTGGTTGGTCTT  100

seq1  TTGCTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG  150

seq1  TTTTGTTTTAAAGCTTTATGGGGAAAGAAAGTAGTCCGTCCTGTTATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTAAAGCTTTATGGGGAAAGAAAGTAGTCCGTCCTGTTATGTT  200

seq1  TATAAAAAGATAAGGAGAGAAGGAATATGATTGGTGGATGTGCAGTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAGATAAGGAGAGAAGGAATATGATTGGTGGATGTGCAGTCAGG  250

seq1  TGTGGGGGAAGGGGTGCCTACATGGGTCCATGCTGGGGCATCCCTGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGGAAGGGGTGCCTACATGGGTCCATGCTGGGGCATCCCTGTCCC  300

seq1  CTGAGGGACCAGCCACACAACACAGTATAGTATAGAACAGACTTTATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGACCAGCCACACAACACAGTATAGTATAGAACAGACTTTATTCA  350

seq1  GGGCATGGGAAGGGGAGTTCAGAGGATAGTAGAGACAGAGAAAGGGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATGGGAAGGGGAGTTCAGAGGATAGTAGAGACAGAGAAAGGGAGAG  400

seq1  AGAGAGAGAGAGAGAGAGAGAGA  423
      |||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGA  423


seq1: chr2_9749037_9750067
seq2: B6Ng01-137E15.g_68_1084 (reverse)

seq1  GAACTGAAATGAGCAAGGAACTTCCAGGCCAGGGGCTGGGAATAAAGGCT  50
      |||||| ||||||||||  |||||||||||| |||||||  || ||||||
seq2  GAACTG-AATGAGCAAG--ACTTCCAGGCCA-GGGCTGG--AT-AAGGCT  43

seq1  GGTGCTTACGTCTAGCATGCATGAGGTTCCAGTCCAATTCCCAGCATGTG  100
       |||||||||||  |||||||||| |||||||||| ||||||||||||||
seq2  -GTGCTTACGTCATGCATGCATGAAGTTCCAGTCC-ATTCCCAGCATGTG  91

seq1  AAGAGAAAAACAGGCCTTGAAATAAATGAGCACAATTGTACACACCTGTA  150
      ||||| ||||||| |||||||   ||||||| ||||||||||||| ||||
seq2  AAGAG-AAAACAGCCCTTGAA--TAATGAGCCCAATTGTACACACTTGTA  138

seq1  ATCACAGCATGAAAGTCTCTGCTGCCCAGAAAGTTTGAGGCCAACCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATCACAGCATGAAAGTCTCTGCTGCCCAGAAAGTTTGAGGCCAACTTGGG  188

seq1  CTACACAAGACTCTGAATCAAACCACAAAAAGATCTTGGAAAAGTTTCCC  250
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  CTACACAAGACTCTGAATCAAA-CACAAAAAGATC-TGGAAAAGTTTCCC  236

seq1  CAGGGAAATAGCTAGCACCCTGAGGTCTGTGCCTGATTTCTCTAAACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAATAGCTAGCACCCTGAGGTCTGTGCCTGATTTCTCTAAACCTT  286

seq1  GGCAAACATCTTTGGGTTCCCAGCTCCCCTACTGGGGCAGGCAAGCAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACATCTTTGGGTTCCCAGCTCCCCTACTGGGGCAGGCAAGCAGCA  336

seq1  GCTCGAGATAGCCCCTCCCTCCTGCTTCTGGGGGGGTGAAGCCGTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGAGATAGCCCCTCCCTCCTGCTTCTGGGGGGGTGAAGCCGTCTCAG  386

seq1  CAGGTGTCTCTGGCTTTTCTCCTGAGGCAAGACACAAATGCAGGTGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTCTCTGGCTTTTCTCCTGAGGCAAGACACAAATGCAGGTGTCTC  436

seq1  TGGCCTCTCCCTTTTTTGCTCCAAGTGGGAGTGGGTGGTTAGGGAGGTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCTCCCTTTTTTGCTCCAAGTGGGAGTGGGTGGTTAGGGAGGTGC  486

seq1  CCAGCCACTCCCTTCTGCCCCCCAGGCTCGGTGGCTAGGGAGGGCCCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCACTCCCTTCTGCCCCCCAGGCTCGGTGGCTAGGGAGGGCCCTCT  536

seq1  GCTGCCAAGTCTTAGAACAGAAACCTAGAGTTCTATGCTGAGTCCTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAAGTCTTAGAACAGAAACCTAGAGTTCTATGCTGAGTCCTCCTT  586

seq1  CACTGCCTTCCTACAAACCCATTTTCCTGAGAAGAATCTGCCCAGCTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTTCCTACAAACCCATTTTCCTGAGAAGAATCTGCCCAGCTGCC  636

seq1  TCAGGATTTTTCTAGGAAGTTAAAATGCTCCCTCACCTGTGAGAGACCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATTTTTCTAGGAAGTTAAAATGCTCCCTCACCTGTGAGAGACCCT  686

seq1  GCATTCTTTCCACCCTCCAGCAGCTGAGTGTCTGAGCGAGTTGACATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCTTTCCACCCTCCAGCAGCTGAGTGTCTGAGCGAGTTGACATCCA  736

seq1  CTCCTGTGTGACCCACTCCCACAGTGATCACTGAGGCCCAGTGCCCAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGTGACCCACTCCCACAGTGATCACTGAGGCCCAGTGCCCAGCC  786

seq1  CAGTTGGACTGAGACGATACCAACACAGCCAGGGACAGCCAGCCATTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGACTGAGACGATACCAACACAGCCAGGGACAGCCAGCCATTGGT  836

seq1  CTCCTGGAGCTGGCAGCCTGGCCCCAGAAGCCCTCACAGTTTGAGCTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGAGCTGGCAGCCTGGCCCCAGAAGCCCTCACAGTTTGAGCTGTT  886

seq1  ACTTTTAAATACCACCCCAATGCTCTAACTTGGGGGACTCTCAAAGCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAAATACCACCCCAATGCTCTAACTTGGGGGACTCTCAAAGCCTT  936

seq1  AGCCAACCTGAATCACAATAAGACTGTGGTGTATGTGGGGGGGGGGGTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACCTGAATCACAATAAGACTGTGGTGTATGTGGGGGGGGGGGTGC  986

seq1  TTTTTCTTCCTAGAAGGAACAAGGAGAATTC  1031
      |||||||||||||||||||||||||||||||
seq2  TTTTTCTTCCTAGAAGGAACAAGGAGAATTC  1017


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