BAC Information

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BAC

Clone NameB6Ng01-137L09
Chromosome2 (Build37)
Map Location 91,052,911 - 91,158,971
singlet/doubletdoublet
Overlap geneDdb2, Pacsin3, Zfp289, 1110051M20Rik
Upstream geneOlfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik, Nup160, Fnbp4, Rpl30-ps3, Agbl2, Mtch2, C1qtnf4, Ndufs3, Kbtbd4, Ptpmt1, Cugbp1, LOC279067, Rapsn, Psmc3, Slc39a13, Sfpi1, Mybpc3, Madd, Nr1h3, Acp2
Downstream geneLrp4, LOC619941, Ckap5, F2, Zfp408, Arhgap1, D2Ertd391e, LOC100043179, D230010M03Rik, D030051N19Rik, Chrm4, Mdk, Dgkz, Creb3l1, Phf21a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137L09.bB6Ng01-137L09.g
ACCDH937153DH937154
length933644
definitionDH937153|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L09, 5' end.DH937154|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,158,032 - 91,158,971)(91,052,911 - 91,053,554)
sequence
gaattccagaacagccaggtctacatagtgagaccctgttctcaaaaata
caaaaaagaaaaaaaagaaaaaaaaaaaaagaaagaaagaaagaaagaaa
gaagagaagagaagagaaaagaaaagaaaagttcattcttccgacttgat
tttaaattggaaaggaaaatgtagttgaatatccgtgtgtctgggctgga
gagatgactcagtggttaatgagcactggctgctcttccagggaacctag
ttcaattcccagcacccacatggaagctcacaactgtctgtaactccagt
tccaggaggtctgacaccctcacatgaacatacatgcaggcaaaaccaat
tcacataaaataaataaatcacttttaaaaatatatttgtgtatatattg
atatactggtgtatagccgtattaaaattgcagacacaaatttataatgg
ctcttaactgtttatttttattttattttttgttttgttttttcaagaca
gagtttttctgtatagccttggctgtcttggaactcactctgtagaccag
gctggcctcatactcacagagatctgcttgcctctgcctcgaaagtgctg
atggaaccaaaggcgtttgtcaccgcccagcttaaaatgttttactaata
ctgttattccatctccattttcttattggcaattgaagggagatggccta
ggccaaagatggcagaaagatggaacagtctgtggtaaatttaacacagc
aaaagtcacattttaggaatatctacccaactccctgtgtaggctatctt
tcatccatgaaatatagaaagataagaatgaaggaaggaaggaaggaagg
aacgaatgaaggaaggaaggatttcccaagagctactgatgcagagctga
agggctggtagaaaaacaggctgtggggaggga
gggggtggagacaggatgcccagaacttgctagctatctactccagccaa
atcagtgggttccaggtacagtgagaaaccgtttcaaaaataagatggag
aacaactgagaaagacacctgctgtcaacctctagccttcacacacaaag
tattttttaagggctggatatccagttctgtggcagagcacctatatagc
atacacaaggctgtatgtttgatcgcagaatctcacacacaggccagcct
ggtctgcacagaaaccctgtcttgaaaaaacaaaagtctgaacaaggata
atgggaaaacatttgttaagagccagaggtgttaagtggtaaagatctta
cttagcatgcacaagtgttcagtccccagaattgcaaaaaaaaaaaaaaa
caaaaatgcccaagttggtatcatcttaagaaactgcaagagaaaagctg
ggctgtggtggtgcacgcctttaatcccagcacttgggaggcagaggcaa
gcggatttgagttcgaggccagcctggtctacaaagtgagttccaggaca
gcaagggctacacagagaaactgtcttgaaaaaaaaagagagagaaagag
agagagagaaagatagaaactataagagaggagctagagagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_91158032_91158971
seq2: B6Ng01-137L09.b_47_979 (reverse)

seq1  TCCCTCCACACAGCCTGTTTTCTCTCCCATGCCCTTCAGCTTCTGCATCA  50
      ||||||| ||||||||||||| ||| ||| |||||||||| |||||||||
seq2  TCCCTCCCCACAGCCTGTTTT-TCTACCA-GCCCTTCAGC-TCTGCATCA  47

seq1  TGTAGCTCTTTGGGAATTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTT  100
       ||||||| ||||||| |||||||||||||| ||| ||||||||||||||
seq2  -GTAGCTC-TTGGGAAATCCTTCCTTCCTTCATTCGTTCCTTCCTTCCTT  95

seq1  CCTTCCTTCCTTCCTTATCTTTCTATCTTTCATGGATGAAAGATAGCCTA  150
      ||||||||| || ||||||||||||| |||||||||||||||||||||| 
seq2  CCTTCCTTCATT-CTTATCTTTCTATATTTCATGGATGAAAGATAGCCT-  143

seq1  ACACAGGGAGTTGGGTAGATATTCCTAAAATGTGACTTTTGCTGTGTTTA  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACACAGGGAGTTGGGTAGATATTCCTAAAATGTGACTTTTGCTGTG-TTA  192

seq1  AATTTACCACAGACTGTTCCATCTTTCTGCCATCTTTGGCCTAGGCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACCACAGACTGTTCCATCTTTCTGCCATCTTTGGCCTAGGCCATC  242

seq1  TCCCTTCAATTGCCAATAAGAAAATGGAGATGGAATAACAGTATTAGT-A  299
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCCTTCAATTGCCAATAAGAAAATGGAGATGGAATAACAGTATTAGTAA  292

seq1  AACATTTTAAGCTGGGCGGTGACAAACGCCTTTGGTTCCATCAGCACTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTAAGCTGGGCGGTGACAAACGCCTTTGGTTCCATCAGCACTTT  342

seq1  CGAGGCAGAGGCAAGCAGATCTCTGTGAGTATGAGGCCAGCCTGGTCTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCAGAGGCAAGCAGATCTCTGTGAGTATGAGGCCAGCCTGGTCTAC  392

seq1  AGAGTGAGTTCCAAGACAGCCAAGGCTATACAGAAAAACTCTGTCTTGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGTTCCAAGACAGCCAAGGCTATACAGAAAAACTCTGTCTTGAA  442

seq1  AAAACAAAACAAAAAATAAAATAAAAATAAACAGTTAAGAGCCATTATAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAAAATAAAATAAAAATAAACAGTTAAGAGCCATTATAA  492

seq1  ATTTGTGTCTGCAATTTTAATACGGCTATACACCAGTATATCAATATATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTCTGCAATTTTAATACGGCTATACACCAGTATATCAATATATA  542

seq1  CACAAATATATTTTTAAAAGTGATTTATTTATTTTATGTGAATTGGTTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATATATTTTTAAAAGTGATTTATTTATTTTATGTGAATTGGTTTT  592

seq1  GCCTGCATGTATGTTCATGTGAGGGTGTCAGACCTCCTGGAACTGGAGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCATGTATGTTCATGTGAGGGTGTCAGACCTCCTGGAACTGGAGTT  642

seq1  ACAGACAGTTGTGAGCTTCCATGTGGGTGCTGGGAATTGAACTAGGTTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTTGTGAGCTTCCATGTGGGTGCTGGGAATTGAACTAGGTTCC  692

seq1  CTGGAAGAGCAGCCAGTGCTCATTAACCACTGAGTCATCTCTCCAGCCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAGCAGCCAGTGCTCATTAACCACTGAGTCATCTCTCCAGCCCA  742

seq1  GACACACGGATATTCAACTACATTTTCCTTTCCAATTTAAAATCAAGTCG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACGGATATTCAACTACATTTTCCTTTCCAATTTAAAATCAAGTCG  792

seq1  GAAGAATGAACTTTTCTTTTCTTTTCTCTTCTCTTCTCTTCTTTCTTTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGAACTTTTCTTTTCTTTTCTCTTCTCTTCTCTTCTTTCTTTCT  842

seq1  TTCTTTCTTTCTTTTTTTTTTTTTCTTTTTTTTCTTTTTTGTATTTTTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTTTTTTTTTTTCTTTTTTTTCTTTTTTGTATTTTTGA  892

seq1  GAACAGGGTCTCACTATGTAGACCTGGCTGTTCTGGAATTC  940
      |||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGGTCTCACTATGTAGACCTGGCTGTTCTGGAATTC  933

seq1: chr2_91052911_91053554
seq2: B6Ng01-137L09.g_80_723

seq1  GGGGGTGGAGACAGGATGCCCAGAACTTGCTAGCTATCTACTCCAGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGAGACAGGATGCCCAGAACTTGCTAGCTATCTACTCCAGCCAA  50

seq1  ATCAGTGGGTTCCAGGTACAGTGAGAAACCGTTTCAAAAATAAGATGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGGGTTCCAGGTACAGTGAGAAACCGTTTCAAAAATAAGATGGAG  100

seq1  AACAACTGAGAAAGACACCTGCTGTCAACCTCTAGCCTTCACACACAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTGAGAAAGACACCTGCTGTCAACCTCTAGCCTTCACACACAAAG  150

seq1  TATTTTTTAAGGGCTGGATATCCAGTTCTGTGGCAGAGCACCTATATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTAAGGGCTGGATATCCAGTTCTGTGGCAGAGCACCTATATAGC  200

seq1  ATACACAAGGCTGTATGTTTGATCGCAGAATCTCACACACAGGCCAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAAGGCTGTATGTTTGATCGCAGAATCTCACACACAGGCCAGCCT  250

seq1  GGTCTGCACAGAAACCCTGTCTTGAAAAAACAAAAGTCTGAACAAGGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCACAGAAACCCTGTCTTGAAAAAACAAAAGTCTGAACAAGGATA  300

seq1  ATGGGAAAACATTTGTTAAGAGCCAGAGGTGTTAAGTGGTAAAGATCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAAACATTTGTTAAGAGCCAGAGGTGTTAAGTGGTAAAGATCTTA  350

seq1  CTTAGCATGCACAAGTGTTCAGTCCCCAGAATTGCAAAAAAAAAAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCATGCACAAGTGTTCAGTCCCCAGAATTGCAAAAAAAAAAAAAAA  400

seq1  CAAAAATGCCCAAGTTGGTATCATCTTAAGAAACTGCAAGAGAAAAGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGCCCAAGTTGGTATCATCTTAAGAAACTGCAAGAGAAAAGCTG  450

seq1  GGCTGTGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGGTGGTGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAA  500

seq1  GCGGATTTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGATTTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACA  550

seq1  GCAAGGGCTACACAGAGAAACTGTCTTGAAAAAAAAAGAGAGAGAAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGGCTACACAGAGAAACTGTCTTGAAAAAAAAAGAGAGAGAAAGAG  600

seq1  AGAGAGAGAAAGAAAGAAACTATAAGAGAGGAGCTAGAGAGATG  644
      ||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAGAGAGAAAGATAGAAACTATAAGAGAGGAGCTAGAGAGATG  644