BAC Information

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BAC

Clone NameB6Ng01-137M07
Chromosome2 (Build37)
Map Location 106,576,186 - 106,723,279
singlet/doubletdoublet
Overlap geneC130023O10Rik
Upstream geneElp4, Immp1l, LOC100043402, Dph4, LOC668765, Dcdc5, 9330126M15
Downstream geneLOC677260, 2700007P21Rik, LOC383739, Fshb, Kcna4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137M07.bB6Ng01-137M07.g
ACCDH937197DH937198
length1,037526
definitionDH937197|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M07, 5' end.DH937198|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(106,576,186 - 106,577,231)(106,722,748 - 106,723,279)
sequence
gaattcacatcatgcgcagcgctctccgatttaaattgttgccacttaat
attcactgaacgtcggccctgcacttttgtcctcagaaaaaaacagaggc
ggcatgagctcgtgcagtgggctttgttcgctgtaattagttggtgatag
aacagtgtggatacagcggttcagcagggccagggaagcagtgccctagg
tgcaaacggggctctggcctgcgcactccttcagctccgtgacagttctg
gagtgtggtggccaagccaggaaaaagagaacagcttcgttctggaagca
ccttggttagcttagacatcctctctgttggttccctgtgatacctcgca
ccctggttcctttgttcctctttggagccgaccctcctggaagctctgcc
tggagactgaagttgccattttattgttcttctccagagcctcactggtt
tctagctgtgttttggtggatctggactgcagttaacctttcagggaagc
agaaatgtgaagttgaaacaagaaagatgctttaagagaccttagcactt
gcccacagtcctagcactaggaggaggaaggagagtcgagaacctacact
aaccttgcttacatgactaggtcagcctggctacattcgaccctgtttga
gagagagacaaaggacagagaagggcagagggagggaggaagaagatgat
gctaagttgctttctggaaccctgtggctgttggtgctgggcctgttctc
tatatacaaaaaaggagaaggtgacatacccaagttcttgaaggagacat
gtagtaagagcacacatccctggactccatggtcagggctcatgctaagg
cttatcagtggaattcattcctcttcaggaacctgcatttaaaaatcaca
gtttgtgcttgttgacaaagtctttttaagaatgaggccactgctgggcg
tagtggcgaacactttaatccagcactcgggagcagagcagttgatttct
gagttcgagcagctgtctaacagtgagttccaggaca
aaatattcgatataaatgtagaagaggagagggtaacttttcgaggccct
ccccaagctccgggtgagtgtttcagcagtggttaaagttgaaaagggac
gatggtgtgtcggcgctagcttcctgctctccacagaggaagacaagcca
ctgatggacctagtggccatctctttccttgtttcccacccttaattctg
tattacctctgctgttgtactcacattgtcctgtaactgcaatgctgttt
tatgtgcaatgggtaatgctgaaaactgctctctgtgctgcgactgagca
aatgctgctcactacagtatcaagcaatgcaattatttaggaaacatgga
cattaaactctcaaaggagattttttttttttgtctcacgtagcccagac
aagcctcaagctcactatgaggctgactgcattcttgaattcctgatctt
ttttttacctcttaaggactgggactagaagtgtgtctcaccattctgtt
ttcagaacagatttaaatatgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_106576186_106577231
seq2: B6Ng01-137M07.b_48_1084

seq1  GAATTCACATCATGCGCAGCGCTCTCCGATTTAAATTGTTGCCACTTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCATGCGCAGCGCTCTCCGATTTAAATTGTTGCCACTTAAT  50

seq1  ATTCACTGAACGTCGGCCCTGCACTTTTGTCCTCAGAAAAAAACAGAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGAACGTCGGCCCTGCACTTTTGTCCTCAGAAAAAAACAGAGGC  100

seq1  GGCATGAGCTCGTGCAGTGGGCTTTGTTCGCTGTAATTAGTTGGTGATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAGCTCGTGCAGTGGGCTTTGTTCGCTGTAATTAGTTGGTGATAG  150

seq1  AACAGTGTGGATACAGCGGTTCAGCAGGGCCAGGGAAGCAGTGCCCTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGTGGATACAGCGGTTCAGCAGGGCCAGGGAAGCAGTGCCCTAGG  200

seq1  TGCAAACGGGGCTCTGGCCTGCGCACTCCTTCAGCTCCGTGACAGTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACGGGGCTCTGGCCTGCGCACTCCTTCAGCTCCGTGACAGTTCTG  250

seq1  GAGTGTGGTGGCCAAGCCAGGAAAAAGAGAACAGCTTCGTTCTGGAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGGTGGCCAAGCCAGGAAAAAGAGAACAGCTTCGTTCTGGAAGCA  300

seq1  CCTTGGTTAGCTTAGACATCCTCTCTGTTGGTTCCCTGTGATACCTCGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTAGCTTAGACATCCTCTCTGTTGGTTCCCTGTGATACCTCGCA  350

seq1  CCCTGGTTCCTTTGTTCCTCTTTGGAGCCGACCCTCCTGGAAGCTCTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGTTCCTTTGTTCCTCTTTGGAGCCGACCCTCCTGGAAGCTCTGCC  400

seq1  TGGAGACTGAAGTTGCCATTTTATTGTTCTTCTCCAGAGCCTCACTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACTGAAGTTGCCATTTTATTGTTCTTCTCCAGAGCCTCACTGGTT  450

seq1  TCTAGCTGTGTTTTGGTGGATCTGGACTGCAGTTAACCTTTCAGGGAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTGTGTTTTGGTGGATCTGGACTGCAGTTAACCTTTCAGGGAAGC  500

seq1  AGAAATGTGAAGTTGAAACAAGAAAGATGCTTTAAGAGACCTTAGCACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGTGAAGTTGAAACAAGAAAGATGCTTTAAGAGACCTTAGCACTT  550

seq1  GCCCACAGTCCTAGCACTAGGAGGAGGAAGGAGAGTCGAGAACCTACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACAGTCCTAGCACTAGGAGGAGGAAGGAGAGTCGAGAACCTACACT  600

seq1  AACCTTGCTTACATGACTAGGTCAGCCTGGCTACATTCGACCCTGTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTGCTTACATGACTAGGTCAGCCTGGCTACATTCGACCCTGTTTGA  650

seq1  GAGAGAGACAAAGGACAGAGAAGGGCAGAGGGAGGGAGGAAGAAGATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACAAAGGACAGAGAAGGGCAGAGGGAGGGAGGAAGAAGATGAT  700

seq1  GCTAAGTTGCTTTCTGGAACCCTGTGGCTGTTGGTGCT-GGCCTGTTCTC  749
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTAAGTTGCTTTCTGGAACCCTGTGGCTGTTGGTGCTGGGCCTGTTCTC  750

seq1  TATATACAAAAAAGGAGAAGGTGACATACCCAAGTTCTTGAAGGAGACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACAAAAAAGGAGAAGGTGACATACCCAAGTTCTTGAAGGAGACAT  800

seq1  GTAGTAAGAGCACACATCCCTGGACTCCATGGTCAGGGCTCATGCTAAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAGAGCACACATCCCTGGACTCCATGGTCAGGGCTCATGCTAAGG  850

seq1  CTTATCAGTGGAATTCATTCCTCTTCAGGAACCTGCATTTAAAAATCACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CTTATCAGTGGAATTCATTCCTCTTCAGGAACCTGCATTTAAAAATCAC-  899

seq1  AGTTTGTGCTTG-TGACAAAGTC-TTTTAAGAATGAAGGCCACTGCTGGG  947
      |||||||||||| |||||||||| ||||||||||| ||||||||||||||
seq2  AGTTTGTGCTTGTTGACAAAGTCTTTTTAAGAATG-AGGCCACTGCTGGG  948

seq1  CGTAGTGGCGAACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTG  997
      |||||||||||||| ||||||| ||||||||||||| ||||| ||| || 
seq2  CGTAGTGGCGAACA-CTTTAAT-CCAGCACTCGGGA-GCAGA-GCA-GTT  993

seq1  GATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACA  1046
      ||||||||||||||||  ||||   ||||| | ||||||||||||||||
seq2  GATTTCTGAGTTCGAG--CAGC--TGTCTA-ACAGTGAGTTCCAGGACA  1037

seq1: chr2_106722748_106723279
seq2: B6Ng01-137M07.g_67_598 (reverse)

seq1  ACACACATATTTAAATCTGTTCTGAAAACAGAATGGTGAGACACACTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATATTTAAATCTGTTCTGAAAACAGAATGGTGAGACACACTTCT  50

seq1  AGTCCCAGTCCTTAAGAGGTAAAAAAAAGATCAGGAATTCAAGAATGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAGTCCTTAAGAGGTAAAAAAAAGATCAGGAATTCAAGAATGCAG  100

seq1  TCAGCCTCATAGTGAGCTTGAGGCTTGTCTGGGCTACGTGAGACAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTCATAGTGAGCTTGAGGCTTGTCTGGGCTACGTGAGACAAAAAA  150

seq1  AAAAAATCTCCTTTGAGAGTTTAATGTCCATGTTTCCTAAATAATTGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCTCCTTTGAGAGTTTAATGTCCATGTTTCCTAAATAATTGCAT  200

seq1  TGCTTGATACTGTAGTGAGCAGCATTTGCTCAGTCGCAGCACAGAGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGATACTGTAGTGAGCAGCATTTGCTCAGTCGCAGCACAGAGAGCA  250

seq1  GTTTTCAGCATTACCCATTGCACATAAAACAGCATTGCAGTTACAGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGCATTACCCATTGCACATAAAACAGCATTGCAGTTACAGGACA  300

seq1  ATGTGAGTACAACAGCAGAGGTAATACAGAATTAAGGGTGGGAAACAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGTACAACAGCAGAGGTAATACAGAATTAAGGGTGGGAAACAAGG  350

seq1  AAAGAGATGGCCACTAGGTCCATCAGTGGCTTGTCTTCCTCTGTGGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGATGGCCACTAGGTCCATCAGTGGCTTGTCTTCCTCTGTGGAGAG  400

seq1  CAGGAAGCTAGCGCCGACACACCATCGTCCCTTTTCAACTTTAACCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGCTAGCGCCGACACACCATCGTCCCTTTTCAACTTTAACCACTG  450

seq1  CTGAAACACTCACCCGGAGCTTGGGGAGGGCCTCGAAAAGTTACCCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACACTCACCCGGAGCTTGGGGAGGGCCTCGAAAAGTTACCCTCTC  500

seq1  CTCTTCTACATTTATATCGAATATTTGAATTC  532
      ||||||||||||||||||||||||||||||||
seq2  CTCTTCTACATTTATATCGAATATTTGAATTC  532