BAC Information

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BAC

Clone NameB6Ng01-138L04
Chromosome2 (Build37)12 (Build37)
Map Location 97,403,642 - 97,404,31590,150,858 - 90,151,279
singlet/doubletsingletsinglet
Overlap geneLrrc4c
Upstream geneLOC100043267
Downstream geneLOC621146, LOC664974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138L04.bB6Ng01-138L04.g
ACCDH937885DH937886
length675768
definitionDH937885|Mus musculus domesticus DNA, BAC clone: B6Ng01-138L04, 5' end.DH937886|Mus musculus domesticus DNA, BAC clone: B6Ng01-138L04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(97,403,642 - 97,404,315)(90,150,858 - 90,151,279)
sequence
gaattccattgagttatataaatctatcaatccattcacatttaaatgag
gtttataaaatggcatatggttctaaactgaaagatgaaagctatatcta
tatatggttatgtcatattgcaagtgaaatattttcaaaagattgtcttg
atatcagcaaagaatctgtctctctctttatctctcatacacacacacac
acacaaggtggggggagagaaagaaagagggaagggttagggagaagtgg
ggaagagagagaaagagagagagagaaagagagagaggagagtgagtata
atttcttatcattaaaatgtgagaagcaaacaactggcctggaatgtgga
aatatgaagcatttgtgagatcaagcagtttgtatttatcatgaaattga
aagcaaactgtttttcatgcacttgtatctgcaagtgtgtaaggatgtaa
catgagagcaagctaaggctttggtaggaaaacttagaaggtatttatta
tggaaaatacagagttcacttgaaggtgaaaaaagttctgaaggagtaag
attaaaataacagaacacaaaatactcaaacttcccccaggaaatgaaga
cttctaaagtatttgtgtatccttttacaaaagtaagtggaccgagaggg
aataccagctagcaacatttgaggt
gaattctcacctgaggaataccgaatggctgggaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agattctggcaaggatgtagagatagaggaaaatcctccattgttggtag
gattgccagcttatataactactctggaaatcagtctggtggttcctcag
aaaattggacatagtactaccggaggatcccgcaataccactcctgggca
tatattcagaagatgttccagccggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacagaaaatgtgatacatttacacaatgg
agctattaaaaagaaataattaatgaaattcctaggcaaatggatggacc
tggaggacatcatcctgagtgaggtaacacaatcacaaaagaattcacac
aatatgttctcactgataagtggatattagcccagaaacgtagaataccc
aagatacaagatacaatttgcaaaacgcatgaaactcaagaagaatgaag
accaaagtgtggacactttgccccttcttagaattgggaacaaaacaccc
ttgaaaggggttacagagacaaagtttggagctgagacgaaaggatggac
catctagagactaccata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_97403642_97404315
seq2: B6Ng01-138L04.b_45_719 (reverse)

seq1  ACCTCAAATGTTGCTAGCTGGTATTCCCTCTCGGTCCACTTAC-TTTGTG  49
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  ACCTCAAATGTTGCTAGCTGGTATTCCCTCTCGGTCCACTTACTTTTGTA  50

seq1  AAAGGATACACAAATACTTTAGAAGTCTTCATTTCCTGGGGGAAGTTTGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATACACAAATACTTTAGAAGTCTTCATTTCCTGGGGGAAGTTTGA  100

seq1  GTATTTTGTGTTCTGTTATTTTAATCTTACTCCTTCAGAACTTTTTTCAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGTGTTCTGTTATTTTAATCTTACTCCTTCAGAACTTTTTTCAC  150

seq1  CTTCAAGTGAACTCTGTATTTTCCATAATAAATACCTTCTAAGTTTTCCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTGAACTCTGTATTTTCCATAATAAATACCTTCTAAGTTTTCCT  200

seq1  ACCAAAGCCTTAGCTTGCTCTCATGTTACATCCTTACACACTTGCAGATA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGCCTTAGCTTGCTCTCATGTTACATCCTTACACACTTGCAGATA  250

seq1  CAAGTGCATGAAAAACAGTTTGCTTTCAATTTCATGATAAATACAAACTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCATGAAAAACAGTTTGCTTTCAATTTCATGATAAATACAAACTG  300

seq1  CTTGATCTCACAAATGCTTCATATTTCCACATTCCAGGCCAGTTGTTTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATCTCACAAATGCTTCATATTTCCACATTCCAGGCCAGTTGTTTGC  350

seq1  TTCTCACATTTTAATGATAAGAAATTATACTCACTCTCCTCTCTCTCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACATTTTAATGATAAGAAATTATACTCACTCTCCTCTCTCTCTTT  400

seq1  CTCTCTCTCTCTTTCTCTCTCTTCCCCACTTCTCCCTAACCCTTCCCTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTTTCTCTCTCTTCCCCACTTCTCCCTAACCCTTCCCTCT  450

seq1  TTCTTTCTCTCCCCCCACCTTGTGTGTGTGTGTGTGTATGAGAGATAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTCTCCCCCCACCTTGTGTGTGTGTGTGTGTATGAGAGATAAAG  500

seq1  AGAGAGACAGATTCTTTGCTGATATCAAGACAATCTTTTGAAAATATTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACAGATTCTTTGCTGATATCAAGACAATCTTTTGAAAATATTTC  550

seq1  ACTTGCAATATGACATAACCATATATAGATATAGCTTTCATCTTTCAGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAATATGACATAACCATATATAGATATAGCTTTCATCTTTCAGTT  600

seq1  TAGAACCATATGCCATTTTATAAACCTCATTTAAATGTGAATGGATTGAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCATATGCCATTTTATAAACCTCATTTAAATGTGAATGGATTGAT  650

seq1  AGATTTATATAACTCAATGGAATTC  674
      |||||||||||||||||||||||||
seq2  AGATTTATATAACTCAATGGAATTC  675

seq1: chr12_90150858_90151279
seq2: B6Ng01-138L04.g_422_834 (reverse)

seq1  TATGGCAGTCTCTACATGGTCCATCCTTTCATCTCAGCTCCAAACTTTGT  50
      ||||| |||||||| ||||||||||||||| |||||||||||||||||||
seq2  TATGGTAGTCTCTAGATGGTCCATCCTTTCGTCTCAGCTCCAAACTTTGT  50

seq1  CTCTGTAACTCCTTCCAAGGGTGTTTTGTTCCCACTTCTAAGGAGGGGCA  100
      ||||||||| |||| ||||||||||||||||||| ||||||| |||||||
seq2  CTCTGTAACCCCTTTCAAGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCA  100

seq1  TAGTGTCCACACTTCAGTCTTCATTTTTCTTGAGTTTCATGTGTTTAGGA  150
       |||||||||||||  ||||||||| ||||||||||||||| |||| | |
seq2  AAGTGTCCACACTTTGGTCTTCATTCTTCTTGAGTTTCATGCGTTTTGCA  150

seq1  AATTGTATCTTATATCTTGGGTATCCTAGGTTT-TGGGCTAATATCCACT  199
      ||||||||||| |||||||||||| ||| |||| ||||||||||||||||
seq2  AATTGTATCTTGTATCTTGGGTATTCTACGTTTCTGGGCTAATATCCACT  200

seq1  TATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGAATGTGTTACCTCAC  249
      |||||||||| ||||||||||||| ||| ||||||| |||||||||||||
seq2  TATCAGTGAGAACATATTGTGTGAATTCTTTTGTGATTGTGTTACCTCAC  250

seq1  TCAGGATGATGCCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAAAT  299
      ||||||||||| |||||||||||||||||||| ||||||||||||| |||
seq2  TCAGGATGATGTCCTCCAGGTCCATCCATTTGCCTAGGAATTTCATTAAT  300

seq1  TCATTCTTTTTAATAGCTAAGTAGTACTCCATTGTGTAGATGTACCACAT  349
      |  |||||||||||||          |||||||||||| ||||| |||||
seq2  TATTTCTTTTTAATAG----------CTCCATTGTGTAAATGTATCACAT  340

seq1  TTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTC  390

seq1  TGGCTATTATAAATAAGGCTGCT  422
      |||||||||||||||||||||||
seq2  TGGCTATTATAAATAAGGCTGCT  413