BAC Information

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BAC

Clone NameB6Ng01-139K17
Chromosome2 (Build37)
Map Location 106,970,469 - 107,122,771
singlet/doubletdoublet
Overlap genenone
Upstream geneDcdc5, 9330126M15, C130023O10Rik, LOC677260, 2700007P21Rik, LOC383739, Fshb
Downstream geneKcna4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139K17.bB6Ng01-139K17.g
ACCDH938596DH938597
length4291,104
definitionDH938596|Mus musculus domesticus DNA, BAC clone: B6Ng01-139K17, 5' end.DH938597|Mus musculus domesticus DNA, BAC clone: B6Ng01-139K17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,122,338 - 107,122,771)(106,970,469 - 106,971,594)
sequence
atatgcagatctgaagttggggtatatttctaaacttacagtgaaattct
aatgagtcacaaaggatcgcttgcatgggggtgggatgggggtggggaac
ataaaccacagcaattacttctggacagcttgatgtgctggaacaaaggc
cagaattggactgtacaattgtttctctgtccactggatgtaaaaccttg
actaaaagagccatttgttataatcttgagtctcctcattcatactatgg
gaaatcagaatctcagccctattccacactatcatgagttagggctcaca
gaagaggagaatgaacaacaaagtcttctaggagtataacatttgtggta
taattacaagttggagtatcttaaagcaataaatatctaacacaggctga
atatttgtattctcatttcccctaaatct

gaattcacctattcaatttaactttttaaagatacccttactcttcacag
aattttaaattagtaatataggatttgattgttttagttcaataatttgt
tatttttgtttgctctatttctgatgagaatattacagtcttccccattt
tatgtgttttgctttaaaacagtttcatacatactttaacattttccttc
ttgtttatgtcgtattttgatcatattaattgcataatatcctttattat
ctccttattccctgtagagtcatttttgttcctaacaattatattaaatt
tcacgtcaattttaaaaaacaggatctattgagtttaattagggttgctc
acatgagtgtgcttacttactggaccacagataacttatgagtggctaca
gaactaaagaaaaattactcttcccctaccagaatacattaattttatgc
cctttatagtctgactgcttgttaagatatatttatcacaaattttcagc
aacttttcataaattgatgctaagttttggcacaaatggctgtaattttc
atagggttagtcctgccatgggttttaagattatataaaaatgatatatg
agtgtatagtttcataaatttgaaaatttcaggcattgcttaaaaccctt
tttgctcatttactccttctcttctcagagagttaacattcaatataatt
tagacagttttctattatgtcttatttggtcttgagtttctcattgccct
taaaaaaattatctgtatagcctagagaactaggatagagccaaacacaa
ttggccagaaaaaaaaaaaaaaaaaaaacaactgaaaacaaaaaaggaaa
aagtaaaagattcctaatgatattttctattctcatagattggtgcctag
tccaactgtcatcagagacgcttcatctgacactgatgggtgcagaaaac
acatcaaacattagtggagcttgaaaacccacagagaggaagagaacatt
ctagaggtcagatgtttgagaccaggagatcatgctagaatcactaagca
acacatagactcagcactgaagcaatgatccccagctgcatgatctggtg
tgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_107122338_107122771
seq2: B6Ng01-139K17.b_50_484 (reverse)

seq1  AGATTTAGGAGAAATGAGAATACAAATATTCAGCCTGTGTTAGATATTTA  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAGGGGAAATGAGAATACAAATATTCAGCCTGTGTTAGATATTTA  50

seq1  TTGCTTTAAGATACTCCAACTTGTAATTATACCAC-AATGTTATACTCCT  99
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGCTTTAAGATACTCCAACTTGTAATTATACCACAAATGTTATACTCCT  100

seq1  AGAAGACTTTGTTGTTCATTCTCCTCTTCTGTGAGCCCTAACTCATGATA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACTTTGTTGTTCATTCTCCTCTTCTGTGAGCCCTAACTCATGATA  150

seq1  GTGTGGAATAGGGCTGAGATTCTGATTTCCCATAGTATGAATGAGGAGAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAATAGGGCTGAGATTCTGATTTCCCATAGTATGAATGAGGAGAC  200

seq1  TCAAGATTATAACAAATGGCTCTTTTAGTCAAGGTTTTACATCCAGTGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATTATAACAAATGGCTCTTTTAGTCAAGGTTTTACATCCAGTGGA  250

seq1  CAGAGAAACAATTGTACAGTCCAATTCTGGCCTTTGTTCCAGCACATCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACAATTGTACAGTCCAATTCTGGCCTTTGTTCCAGCACATCAA  300

seq1  GCTGTCCAGAAGTAATTGCTGTGGTTTATGTTCCCCACCCCCATCCCACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCAGAAGTAATTGCTGTGGTTTATGTTCCCCACCCCCATCCCACC  350

seq1  CCCATGCAAGCGATCCTTTGTGACTCATTAGAATTTCACTGTAAGTTTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCAAGCGATCCTTTGTGACTCATTAGAATTTCACTGTAAGTTTAG  400

seq1  AAATATACCCCAACTTCAGATCTGCATATGAATTC  434
      |||||||||||||||||||||||||||||||||||
seq2  AAATATACCCCAACTTCAGATCTGCATATGAATTC  435


seq1: chr2_106970469_106971594
seq2: B6Ng01-139K17.g_69_1172

seq1  GAATTCACCTATTCAATTTAACTTTTTAAAGATACCCTTACTCTTCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTATTCAATTTAACTTTTTAAAGATACCCTTACTCTTCACAG  50

seq1  AATTTTAAATTAGTAATATAGGATTTGATTGTTTTAGTTCAATAATTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAATTAGTAATATAGGATTTGATTGTTTTAGTTCAATAATTTGT  100

seq1  TATTTTTGTTTGCTCTATTTCTGATGAGAATATTACAGTCTTCCCCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTGTTTGCTCTATTTCTGATGAGAATATTACAGTCTTCCCCATTT  150

seq1  TATGTGTTTTGCTTTAAAACAGTTTCATACATACTTTAACATTTTCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTTTTGCTTTAAAACAGTTTCATACATACTTTAACATTTTCCTTC  200

seq1  TTGTTTATGTCGTATTTTGATCATATTAATTGCATAATATCCTTTATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTATGTCGTATTTTGATCATATTAATTGCATAATATCCTTTATTAT  250

seq1  CTCCTTATTCCCTGTAGAGTCATTTTTGTTCCTAACAATTATATTAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTATTCCCTGTAGAGTCATTTTTGTTCCTAACAATTATATTAAATT  300

seq1  TCACGTCAATTTTAAAAAACAGGATCTATTGAGTTTAATTAGGGTTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGTCAATTTTAAAAAACAGGATCTATTGAGTTTAATTAGGGTTGCTC  350

seq1  ACATGAGTGTGCTTACTTACTGGACCACAGATAACTTATGAGTGGCTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGTGTGCTTACTTACTGGACCACAGATAACTTATGAGTGGCTACA  400

seq1  GAACTAAAGAAAAATTACTCTTCCCCTACCAGAATACATTAATTTTATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAAGAAAAATTACTCTTCCCCTACCAGAATACATTAATTTTATGC  450

seq1  CCTTTATAGTCTGACTGCTTGTTAAGATATATTTATCACAAATTTTCAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATAGTCTGACTGCTTGTTAAGATATATTTATCACAAATTTTCAGC  500

seq1  AACTTTTCATAAATTGATGCTAAGTTTTGGCACAAATGGCTGTAATTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCATAAATTGATGCTAAGTTTTGGCACAAATGGCTGTAATTTTC  550

seq1  ATAGGGTTAGTCCTGCCATGGGTTTTAAGATTATATAAAAATGATATATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGTTAGTCCTGCCATGGGTTTTAAGATTATATAAAAATGATATATG  600

seq1  AGTGTATAGTTTCATAAATTTGAAAATTTCAGGCATTGCTTAAAACCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATAGTTTCATAAATTTGAAAATTTCAGGCATTGCTTAAAACCCTT  650

seq1  TTTGCTCATTTACTCCTTCTCTTCTCAGAGAGTTAACATTCAATATAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTCATTTACTCCTTCTCTTCTCAGAGAGTTAACATTCAATATAATT  700

seq1  TAGACAGTTTTCTATTATGTCTTATTTGGTCTTGAGTTTCTCATTGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGTTTTCTATTATGTCTTATTTGGTCTTGAGTTTCTCATTGCCCT  750

seq1  TAAAAAAATTATCTGTATAGCCTAGAGAACTAGGATAGAGCCAAACACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATTATCTGTATAGCCTAGAGAACTAGGATAGAGCCAAACACAA  800

seq1  TTGGCCAGAAAAAAAAAAAAAAAAAAAACAACTGAAAACAAAAAAGGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCAGAAAAAAAAAAAAAAAAAAAACAACTGAAAACAAAAAAGGAAA  850

seq1  AAGTAAAAGATTCCTAATGATATTCTCCTATTCTCATAGATTGGTGCCTA  900
      |||||||||||||||||||||||| | |||||||||||||||||||||||
seq2  AAGTAAAAGATTCCTAATGATATT-TTCTATTCTCATAGATTGGTGCCTA  899

seq1  GTCCAACTGTCATCAGAGACGCTTCATCTGACAACTGATGGGTGCAGAAA  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GTCCAACTGTCATCAGAGACGCTTCATCTGAC-ACTGATGGGTGCAGAAA  948

seq1  CACA-ACCAAACATTAGGTGGAGCTTGGAAAACCCAACAGAAGAGGGAGA  999
       ||| | ||||||||| ||||||||| |||||||| |||| ||||| |||
seq2  -ACACATCAAACATTA-GTGGAGCTT-GAAAACCC-ACAG-AGAGGAAGA  993

seq1  GGAACCATTCTAGAAGTCAGAGTGTTTGAAGACACAGGAGATCATGGCCT  1049
      |  | ||||||||| |||||| |||||| |||| ||||||||||||  ||
seq2  G--AACATTCTAGAGGTCAGA-TGTTTG-AGAC-CAGGAGATCATG--CT  1036

seq1  AGAATCAACTAAGCCAAACACATAGGACTCACAGCAACTGAAGCAATGAT  1099
      |||||| |||||||  |||||||| ||||  |||| ||||||||||||||
seq2  AGAATC-ACTAAGC--AACACATA-GACT--CAGC-ACTGAAGCAATGAT  1079

seq1  CACCCAGGCTGCATGTATCT-GTGTGAG  1126
      | |||| |||||||| |||| |||||||
seq2  C-CCCA-GCTGCATG-ATCTGGTGTGAG  1104


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