BAC Information

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BAC

Clone NameB6Ng01-139M08
Chromosome2 (Build37)
Map Location 8,218,961 - 8,220,048
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040648, LOC672230
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139M08.bB6Ng01-139M08.g
ACCDH938674DH938675
length1,0831,071
definitionDH938674|Mus musculus domesticus DNA, BAC clone: B6Ng01-139M08, 5' end.DH938675|Mus musculus domesticus DNA, BAC clone: B6Ng01-139M08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgttctttccaagacttttatcatgaaggggtgttttattttt
tcaaatgctttctcagcatctgtagatgatcatgtggtttttgtctttga
gtttgtttgtatagggaattatgttcatgaatttccatatagtaacccat
ccttgcatccctagattgaagcctacttgatcactatagatgatcatttt
gatgtgttcttggattcagtttgtgagaattttattgagtatttttgcac
caatattcataagggaaatttgtctgaagatctctttctttgttgggtca
ttctgtggtttaggtatcagagtaattgtggctacatagaatgaattagg
tagagtaccttctgtttctattttgtggaatagtttgaggttaattggaa
ttaggtcttctttgaaggtttgatagaactctgcattaaacttatttgtt
cctgggtttttttttttcagttgggagattattaatgactgcttctattt
ctttaggggatatttgactgtttaggtcattaatctgatccttatttaac
tttggtacctggtatctgtctaggaaattatctatttcatccaggttttc
cagttttgttgagtatagccttttgtagtaggatctgatgttttggattt
cctcaggttctgttgttatgtctccctttcatttctgattttgttaatta
ggatactgtccctgtgccctctagttagtctggctaagggtttatcttat
cttggtgattttctcaaagaaccagctcttggtttggttgattttttgta
tagttctttttgtttccacttggtttgtttcagccttaattttgattatt
tcctgctatctactcctcttgggtgaatttgcttctttttgttctagagc
ttttaggtgtgctgtcaagctgctagtgtatgctctttcttagtttcttt
ttggtggaactcagagctataagttttcctcttaggactgcttttcatgg
gtcccataagttgggtaggtgggctcactttcataaccttaaaaatcttt
atctttattcttccttgaaccagttaacgatga
gaattcacttgagccaggaagaggtggagaacctcagtccactttagaat
attttcccttgcatagaactttaaacattgccatagctaagcaagcagcc
atggcactgtctttgacactgacactagagtaaaactacttgtgcaatga
aagtcagactgaacctggaaaatgtaaccaattactgaacatttaggaaa
gaactattacaaagccactgaaaatttggcttaggtacaaaccctttgcc
aaataagaaggtattaaaatgaaattcacattgagaactactgttgtgtt
aatagcattggaagccttacaaacaccagaagtctgagtacacatggaat
gacaatgaaagttccaacttaggagcattaatgctgctctcaacctatga
acagagaccctagaggctttcacactcagggtgacactggcaaagcagga
acactgtaaatgacaatcaattgaaacacagaataattgtatgaatacta
tattaaaactgccccaacatctttgaattatctgagaaaaagttgctatt
atggaaaataaaactgattcaactttactgctgatataaacttaaagggg
ttaaaaatttagcaagggagttgactttccaccactgttaaagtctaaac
aaaggaactaatggctaatatccaattttacatatattatgttaaatgtg
tttcaagatgtaagaacacctttcatctaaaaaaaatctataattgtata
tttatttctactctagtaaatggaccctgattttgactgacattgaaaca
ctgttttcatttggaaactaaagctcttggatttatttagagcctaatag
gagttacatgaaaaatttaggcagaaagtagcacagtagtgtgaaaccat
ccccacatttatagttctgctggtggaatgtctccatcattgcacagtag
aataactgataaaacacatttgtacatgtggctcatcagaaagagatgct
aaagatctgaatattatatatatatatatattatataataatatattaga
atagagaaattctcctaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_8218961_8220048
seq2: B6Ng01-139M08.g_67_1137 (reverse)

seq1  TCTTTAAGAGATATTTCTACTTATTCTAAATAATATATATATATATATAT  50
      |||||| |||| ||||||   |||||    ||||||||   |||||| ||
seq2  TCTTTAGGAGA-ATTTCT--CTATTC----TAATATATTATTATATA-AT  42

seq1  ATATATATATATATAATATTCAGGATCTTTTAAGCATCTCTGTTCTGGAT  100
      |||||||||||||||||||||| |||||||  ||||||||| |||| |||
seq2  ATATATATATATATAATATTCA-GATCTTT--AGCATCTCT-TTCT-GAT  87

seq1  GAGCCACATGTACAAATGTGTTTTATCAGGTTATTCTACTTGTGCAATGA  150
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  GAGCCACATGTACAAATGTGTTTTATCA-GTTATTCTAC-TGTGCAATGA  135

seq1  TGGAGACATTCCACCAGCAGAACTATAAATGTGGGGATGGTTTCACACTT  200
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGAGACATTCCACCAGCAGAACTATAAATGTGGGGATGGTTTCACAC-T  184

seq1  ACTGTGCTACTTTTCTGCCTAAATTTTTCATGTAACTCCTATTAGGCTCT  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCTAC-TTTCTGCCTAAATTTTTCATGTAACTCCTATTAGGCTCT  233

seq1  AAATAAATCCAAGAGCTTTAGTTTCCAAATGAAAACAGTGTTTCAATGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATCCAAGAGCTTTAGTTTCCAAATGAAAACAGTGTTTCAATGTC  283

seq1  AGTCAAAATCAGGGTCCATTTACTAGAGTAGAAATAAATATACAATTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAATCAGGGTCCATTTACTAGAGTAGAAATAAATATACAATTATA  333

seq1  GATTTTTTTTAGATGAAAGGTGTTCTTACATCTTGAAACACATTTAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTAGATGAAAGGTGTTCTTACATCTTGAAACACATTTAACAT  383

seq1  AATATATGTAAAATTGGATATTAGCCATTAGTTCCTTTGTTTAGACTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGTAAAATTGGATATTAGCCATTAGTTCCTTTGTTTAGACTTTA  433

seq1  ACAGTGGTGGAAAGTCAACTCCCTTGCTAAATTTTTAACCCCTTTAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTGGAAAGTCAACTCCCTTGCTAAATTTTTAACCCCTTTAAGTT  483

seq1  TATATCAGCAGTAAAGTTGAATCAGTTTTATTTTCCATAATAGCAACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGCAGTAAAGTTGAATCAGTTTTATTTTCCATAATAGCAACTTT  533

seq1  TTCTCAGATAATTCAAAGATGTTGGGGCAGTTTTAATATAGTATTCATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGATAATTCAAAGATGTTGGGGCAGTTTTAATATAGTATTCATAC  583

seq1  AATTATTCTGTGTTTCAATTGATTGTCATTTACAGTGTTCCTGCTTTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTCTGTGTTTCAATTGATTGTCATTTACAGTGTTCCTGCTTTGCC  633

seq1  AGTGTCACCCTGAGTGTGAAAGCCTCTAGGGTCTCTGTTCATAGGTTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCACCCTGAGTGTGAAAGCCTCTAGGGTCTCTGTTCATAGGTTGAG  683

seq1  AGCAGCATTAATGCTCCTAAGTTGGAACTTTCATTGTCATTCCATGTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATTAATGCTCCTAAGTTGGAACTTTCATTGTCATTCCATGTGTA  733

seq1  CTCAGACTTCTGGTGTTTGTAAGGCTTCCAATGCTATTAACACAACAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTTCTGGTGTTTGTAAGGCTTCCAATGCTATTAACACAACAGTA  783

seq1  GTTCTCAATGTGAATTTCATTTTAATACCTTCTTATTTGGCAAAGGGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAATGTGAATTTCATTTTAATACCTTCTTATTTGGCAAAGGGTTT  833

seq1  GTACCTAAGCCAAATTTTCAGTGGCTTTGTAATAGTTCTTTCCTAAATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTAAGCCAAATTTTCAGTGGCTTTGTAATAGTTCTTTCCTAAATGT  883

seq1  TCAGTAATTGGTTACATTTTCCAGGTTCAGTCTGACTTTCATTGCACAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATTGGTTACATTTTCCAGGTTCAGTCTGACTTTCATTGCACAAG  933

seq1  TAGTTTTACTCTAGTGTCAGTGTCAAAGACAGTGCCATGGCTGCTTGCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTACTCTAGTGTCAGTGTCAAAGACAGTGCCATGGCTGCTTGCTT  983

seq1  AGCTATGGCAATGTTTAAAGTTCTATGCAAGGGAAAATATTCTAAAGTGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGGCAATGTTTAAAGTTCTATGCAAGGGAAAATATTCTAAAGTGG  1033

seq1  ACTGAGGTTCTCCACCTCTTCCTGGCTCAAGTGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGTTCTCCACCTCTTCCTGGCTCAAGTGAATTC  1071