BAC Information

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BAC

Clone NameB6Ng01-140B15
Chromosome2 (Build37)
Map Location 146,470,546 - 146,531,116
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC433482, LOC100043810, Rin2, Nat5, Crnkl1, 4930529M08Rik, LOC100043563, Insm1, A230067G21Rik
Downstream geneLOC668918, Gm114, Xrn2, Nkx2-4, Nkx2-2, LOC100043816, LOC668919, LOC668920, Pax1, LOC640914, A530006G24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140B15.bB6Ng01-140B15.g
ACCDH938919DH938920
length1,004874
definitionDH938919|Mus musculus domesticus DNA, BAC clone: B6Ng01-140B15, 5' end.DH938920|Mus musculus domesticus DNA, BAC clone: B6Ng01-140B15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,530,118 - 146,531,116)(146,470,546 - 146,471,417)
sequence
gaattctggggcaataaaataaaataaaagaggataaaaagataaaaagt
cacagtaaccaccttaatgtggttctattattattattattattattatt
attattattattattattattattaggttttttgagacagggtttctctg
tatagccctagctgtcctggaactcactttgtagaccaggctggcctcga
actcagaaatccacctgcctctgcctctgcctcccatgtgctgggattaa
aggcgtgcaccaccacgcccggctccttaatatggttctttgctacaaga
tgtggtattgtttttttcctggtccttttcccccacaaaatgcagagatt
tccacagtggctctttattacctgagagaatgaacagttcctatcgcccc
aaacatactgatcctgtacctgaaagtagaaactgtcaaggactaaggca
cctctggggccatgttcttttcatctaagaccaaaccagtttgccatact
tggccaggctctctgttctctgctctttctaccagtccccatacatacca
acatatttggtgagattaactctagagctgtacactgcagcaatttcctg
gaacttagcagctattacctagctagccagtggtggtttggtttaagtct
ggttcttcagaaaatgactcagaaataaaaaaattgtgactaagtaattc
attgaggaaaaatttggtatggaaatcataaagagaatggggaggggatg
taggggcagatcaaatgagatgtttctcagtgggaagtatacgtttttag
acagtacccaaagtgagttctcttagcctcagggagggattttctaagaa
tgagacaggtgtgtcttaggaaaagcagggaccaaaaaaggtagtaataa
tgtcgctaggcccatggtagaagcaccagctttgtctaataaagagaagt
ggtgtgtatgaggaaaaggatataggaagataaaatgagatgtgtttaaa
ggta
gaattcagttcctagcacccacaactggtgatttataaccaactctaact
tcagctcctgggtatcaggtgccctcttctggtctctgtgggcaaatgca
ctcatgcgcagtccaccttcctcacagacgcaggcatgcacatgattaat
aagataatgaaaataagtatttaaaaaagagttaaagaaaattagtagaa
aaatagaatttagactgaagttgtcgtagtgaaaaaggcatatgtgacag
atttgtattaaaaaaaattccagtaagtatgatcaaattaatcatatccc
aagaagaggaatgaacaggaataaatggtagatactaagttagcattaca
aagaccagtgctcccttatacagaaggctggttattgataatgcatggtg
tgtgggtgcgtggatgtgtgtgtgtgtgcatgcgtgtgcgtgtgcatgtg
cgtgtgtgaaaggtcagaaggaaggattttgtgtattctaaccataggga
agggtcaaggtatcaacagatccctgtgcaggtcagaggtcactgcgttc
ttgctgaggcaacacaccagacaaagcagcttaggcagggagggttttgt
gggctcacagtttgagcgtatagtctgtcatagtggggaagctggtggca
ggacctggaggtgcctggtcattttgtggccataacttactacatagacc
aggttggctctgaattcacagacatctatctgtctgcttctgtctcctga
gggctgggattgaggtgtcagcaatgtgcccagtctgtctctgctttaat
atggctccatgcctgatattttatggtctgtctgtctatctatctatcta
tcatcatctaacaatctatctatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_146530118_146531116
seq2: B6Ng01-140B15.b_47_1050 (reverse)

seq1  TACC-TTAAACACATCTCATTTTATC-TCCTATATCCTTTTCCTCATACA  48
      |||| ||||||||||||||||||||| |||||||||||||||||||||||
seq2  TACCTTTAAACACATCTCATTTTATCTTCCTATATCCTTTTCCTCATACA  50

seq1  CACCACTTCTCTTTATTAGACAAAGCTGGTGCTTCTACCATGGGCCTAGC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACTTCTCTTTATTAGACAAAGCTGGTGCTTCTACCATGGGCCTAGC  100

seq1  GACA-TATTACTACCTTTTTTGGTCCCTGCTTTTCCTAAGACACACCTGT  147
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTATTACTACCTTTTTTGGTCCCTGCTTTTCCTAAGACACACCTGT  150

seq1  CTCATTCTTAGAGA--TCCTCCCTGAGGCTAAGAGAACTCACTTTGGGTA  195
      |||||||||||| |   |||||||||||||||||||||||||||||||||
seq2  CTCATTCTTAGAAAATCCCTCCCTGAGGCTAAGAGAACTCACTTTGGGTA  200

seq1  CTGTCTAAAAACGTATACTTCCCACTGAGAAACATCTCATTTGATCTGCC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAAAAACGTATACTTCCCACTGAGAAACATCTCATTTGATCTGCC  250

seq1  CCTACATCCCCTCCCCATTCTCTTTATGATTTCCATACCAAATTTTTCCT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATCCCCTCCCCATTCTCTTTATGATTTCCATACCAAATTTTTCCT  300

seq1  CAATGAATTACTTAGTCACAATTTTTTTATTTCTGAGTCATTTTCTGAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATTACTTAGTCACAATTTTTTTATTTCTGAGTCATTTTCTGAAG  350

seq1  AACCAGACTTAAACCAAACCACCACTGGCTAGCTAGGTAATAGCTGCTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACTTAAACCAAACCACCACTGGCTAGCTAGGTAATAGCTGCTAA  400

seq1  GTTCCAGGAAATTGCTGCAGTGTACAGCTCTAGGGTTAATCTCACCAAAT  445
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTTCCAGGAAATTGCTGCAGTGTACAGCTCTAGAGTTAATCTCACCAAAT  450

seq1  ATGTTGGTATGTATGGGGACTGGTAGAAAGAGCAGAGAACAGAGAGCCTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGTATGTATGGGGACTGGTAGAAAGAGCAGAGAACAGAGAGCCTG  500

seq1  GCCAAGTATGGCAAACTGGTTTGGTCTTAGATGAAAAGAACATGGCCCCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGTATGGCAAACTGGTTTGGTCTTAGATGAAAAGAACATGGCCCCA  550

seq1  GAGGTGCCTTAGTCCTTGACAGTTTCTACTTTCAGGTACAGGATCAGTAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGCCTTAGTCCTTGACAGTTTCTACTTTCAGGTACAGGATCAGTAT  600

seq1  GTTTGGGGCGATAGGAACTGTTCATTCTCTCAGGTAATAAAGAGCCACTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGGCGATAGGAACTGTTCATTCTCTCAGGTAATAAAGAGCCACTG  650

seq1  TGGAAATCTCTGCATTTTGTGGGGGAAAAGGACCAGGAAAAAAACAATAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATCTCTGCATTTTGTGGGGGAAAAGGACCAGGAAAAAAACAATAC  700

seq1  CACATCTTGTAGCAAAGAACCATATTAAGGAGCCGGGCGTGGTGGTGCAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTTGTAGCAAAGAACCATATTAAGGAGCCGGGCGTGGTGGTGCAC  750

seq1  GCCTTTAATCCCAGCACATGGGAGGCAGAGGCAGAGGCAGGTGGATTTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATCCCAGCACATGGGAGGCAGAGGCAGAGGCAGGTGGATTTCT  800

seq1  GAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCTAGGGC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCTAGGGC  850

seq1  TATACAGAGAAACCCTGTCTCAAAAAACCTAATAATAATAATAATAATAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGAGAAACCCTGTCTCAAAAAACCTAATAATAATAATAATAATAA  900

seq1  TAATAATAATAATAATAATAATAATAATAGAACCACATTAAGGTGGTTAC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATAATAATAATAATAATAATAATAGAACCACATTAAGGTGGTTAC  950

seq1  TGTGACTTTTTATCTTTTTATCCTCTTTTATTTTATTTTATTGCCCCAGA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTTTTTATCTTTTTATCCTCTTTTATTTTATTTTATTGCCCCAGA  1000

seq1  ATTC  999
      ||||
seq2  ATTC  1004

seq1: chr2_146470546_146471417
seq2: B6Ng01-140B15.g_67_940

seq1  GAATTCAGTTCCTAGCACCCACAACTGGTGATTTATAACCAACTCTAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCTAGCACCCACAACTGGTGATTTATAACCAACTCTAACT  50

seq1  TCAGCTCCTGGGTATCAGGTGCCCTCTTCTGGTCTCTGTGGGCAAATGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTGGGTATCAGGTGCCCTCTTCTGGTCTCTGTGGGCAAATGCA  100

seq1  CTCATGCGCAGTCCACCTTCCTCACAGACGCAGGCATGCACATGATTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCGCAGTCCACCTTCCTCACAGACGCAGGCATGCACATGATTAAT  150

seq1  AAGATAATGAAAATAAGTATTTAAAAAAGAGTTAAAGAAAATTAGTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATGAAAATAAGTATTTAAAAAAGAGTTAAAGAAAATTAGTAGAA  200

seq1  AAATAGAATTTAGACTGAAGTTGTCGTAGTGAAAAAGGCATATGTGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAATTTAGACTGAAGTTGTCGTAGTGAAAAAGGCATATGTGACAG  250

seq1  ATTTGTATTAAAAAAAATTCCAGTAAGTATGATCAAATTAATCATATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATTAAAAAAAATTCCAGTAAGTATGATCAAATTAATCATATCCC  300

seq1  AAGAAGAGGAATGAACAGGAATAAATGGTAGATACTAAGTTAGCATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAGGAATGAACAGGAATAAATGGTAGATACTAAGTTAGCATTACA  350

seq1  AAGACCAGTGCTCCCTTATACAGAAGGCTGGTTATTGATAATGCATGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGTGCTCCCTTATACAGAAGGCTGGTTATTGATAATGCATGGTG  400

seq1  TGTGGGTGCGTGGATGTGTGTGTGTGTGCATGCGTGTGCGTGTGCATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGCGTGGATGTGTGTGTGTGTGCATGCGTGTGCGTGTGCATGTG  450

seq1  CGTGTGTGAAAGGTCAGAAGGAAGGATTTTGTGTATTCTAACCATAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTGAAAGGTCAGAAGGAAGGATTTTGTGTATTCTAACCATAGGGA  500

seq1  AGGGTCAAGGTATCAACAGATCCCTGTGCAGGTCAGAGGTCACTGCGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCAAGGTATCAACAGATCCCTGTGCAGGTCAGAGGTCACTGCGTTC  550

seq1  TTGCTGAGGCAACACACCAGACAAAGCAGCTTAGGCAGGGAGGGTTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGAGGCAACACACCAGACAAAGCAGCTTAGGCAGGGAGGGTTTTGT  600

seq1  GGGCTCACAGTTTGAGCGTATAGTCTGTCATAGTGGGGAAGCTGGTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCACAGTTTGAGCGTATAGTCTGTCATAGTGGGGAAGCTGGTGGCA  650

seq1  GGACCTGGAGGTGCCTGGTCATTTTGTGGCCATAACTTACTACATAGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGGAGGTGCCTGGTCATTTTGTGGCCATAACTTACTACATAGACC  700

seq1  AGGTTGGCTCTGAATTCACAGACATCTATCTGTCTGCTTCTGTCTCCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGCTCTGAATTCACAGACATCTATCTGTCTGCTTCTGTCTCCTGA  750

seq1  GGGCTGGGATTGAGGTGTCCAGCAATGTGCCCAGTCTGTCTCTGCTTTAA  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGGCTGGGATTGAGGTGT-CAGCAATGTGCCCAGTCTGTCTCTGCTTTAA  799

seq1  TATGGCTCCATGCCTGATATTTTATGGTCTGTCTGTCTATCTATCTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCTCCATGCCTGATATTTTATGGTCTGTCTGTCTATCTATCTATCT  849

seq1  ---ATCATCTATCTATCTATCTATC  872
         |||||||| | |||||||||||
seq2  ATCATCATCTAACAATCTATCTATC  874