BAC Information

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BAC

Clone NameB6Ng01-140H23
Chromosome2 (Build37)
Map Location 88,516,930 - 88,518,010
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1136, Olfr1137, Olfr1138, GA_x5J8B7W3Y5M-1033291-1033773, Olfr1140, Olfr1141, Olfr152, Olfr1142-ps1, Olfr1143, GA_x5J8B7W3Y5M-1094074-1093275, Olfr1145, Olfr1146-ps1, Olfr1147-ps1, Olfr1148, Olfr1149-ps1, Olfr1150-ps1, Olfr1151, Olfr1152, Olfr1153, Olfr1154, Olfr1155, Olfr1156, Olfr1157, Olfr74, Olfr1158, Olfr1159-ps1, Olfr1160, Olfr1161, Olfr73, Olfr1162, Olfr1163, Olfr1164, Olfr1165, Olfr1166, Olfr1167, Olfr1168, Olfr1169-ps1, Olfr1170, Olfr1171-ps1, Olfr1172-ps1, Olfr1173, Olfr1174, Olfr1175, Olfr1176, Olfr1177, Olfr1178, Olfr1179, Olfr1180, Olfr1181, Olfr1182, Olfr1183, Olfr1184, Olfr1185-ps1, Olfr1186, Olfr1187-ps1, Olfr1188, LOC668528, Olfr1189, GA_x5J8B7W4NS2-37772-38277, Olfr475-ps1, Olfr526-ps1, Olfr1192-ps1
Downstream geneOlfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140H23.bB6Ng01-140H23.g
ACCDH939212DH939213
length1,1821,074
definitionDH939212|Mus musculus domesticus DNA, BAC clone: B6Ng01-140H23, 5' end.DH939213|Mus musculus domesticus DNA, BAC clone: B6Ng01-140H23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtaggcttcttgtttgttcatgggcatctctttctgtaggtta
ggaaagttttcttctatagtttatttgaagatattttctgccccccccct
tttttttttttgcttgtttgtttgtttgtttttccacgttctctatggaa
ttttctgcacctgagattctctcttctgtctgttgcattcttttgctgat
aatcacatctatggttcctgatttctttcctaggctttatatctccagag
ttgtgtccttttggcttttcttcattgtttctacttgcatttttagattt
tggatggttttgtttaaatcctgttgggtccggccagtggatcacatgtc
tgggttctggtctggaaaggcatctaggaaacctggaagagaagagaggc
taggtggcggtgcgagagaaagatgcagctaagacagtcatcctgatcaa
agctcaattttactattctgacactcagttatgaaggaggaggaggggcc
cgattccgaaataatcctggggtaaggttgcaggtgacccagtgatggct
ctggaacaggtaagtggcaggctccagcagtgggcgtggcagaacaattg
agaagcaagctccacccctgagcaagcaagtttcaggctggggaggggag
gctacaaaatcaatcacctgtttggttgtgtttacctgtagttctttaag
ggattttagtgtttcctctttaaggacttctacctgtttagcaatgtttt
cctctaattccttgagggatttttgtgcttcttctttaagtgattctacc
tgtttagccatgttctcctgtatttctttaagtgagttattaatgccctt
ctgaaatccactaccagcatcatgagatatgattttagacttgaatcttg
ctttttgggttgttgggtatccaggactcgctgtggtgggcatactgcct
tctgatgctgtcagtgtctgatttctgttagtaagattcttaattgcttt
agcatatgtaatatgtgttgtaatggtctagccttctctgctggacctgt
ctctgtgattcttagcctgtcagacatctggagacagttttcttaattca
tgtccgaattctctgcagcagctcttcttgataagtacgatcgaccgatc
tctgaattgtcgagctctttgtggaacctacc
gaattcaaagtttcctttgagtggtatgctgtagctaatacaaagcagga
aatatgaggatgcatgaagaaacactgaagaacataacacttcttttttc
tctttgtttcatggaagcatttaaatatcaagtaaaggtaattatggaga
aatcctggagtaacctcattgcaccaaaaaaactacctgggacttttctt
ccatcttgatcaagtaagtagagatggcttgatctgctgaagattcttct
tctattgtcattaattcttatctttgccccatctcaggactttgtagcta
ttctatgcttatggggtaacttaattttattgtagaagtggcctttgttg
acgaataaagatgactttaagctttattataccataaatgaaataacaga
ggaatcataaacttaaatgatttattggggttacattgggattatttcag
aattaaatattcctaatttaagtcttgttctatggcaccacatattgatg
ttgaactcttgaggttaactgagagatcataattttatttcatgaaatcc
aacatttatgagaagggaaactttcaggagccactggagctgtcctactt
gagaattctgagcacatgtcacatccagaacaggcagtatgaagcaaggc
aaatctgagcaaatattcatatttctgtataagatgcagtaaacatttgc
atatacataaatattatcatagcttcaagcagcaaaatctgtttgaaatg
taatagaaatcttacacaaaataaaagtatatttagaagctgattataaa
ctttaaaaagtagaggaaagtgctcttcaaatatctcacgatactttaag
aattggtttgtgtctttgaacttcatttttcacatgaattgaaatatcac
agatataaattgaggtaacttgatcaaaataaatgcacttaaatgaaacc
taagtatagaaaatgtagtgattaacttcaccagtagccactataattac
ttatttcttttaaaataaaatgaatgttggtggtttatttatttgtcctt
taggtaatattacattcttttgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_88516930_88518010
seq2: B6Ng01-140H23.g_66_1139

seq1  GAATTCAAAGTTTCCTTTGAGTGGTATGCTGTAGCTAATACAAAGCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTTTCCTTTGAGTGGTATGCTGTAGCTAATACAAAGCAGGA  50

seq1  AATATGAGGATGCATGAAGAAACACTGAAGAACATAACACTTCTTTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGGATGCATGAAGAAACACTGAAGAACATAACACTTCTTTTTTC  100

seq1  TCTTTGTTTCATGGAAGCATTTAAATATCAAGTAAAGGTAATTATGGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTTCATGGAAGCATTTAAATATCAAGTAAAGGTAATTATGGAGA  150

seq1  AATCCTGGAGTAACCTCATTGCACCAAAAAAACTACCTGGGACTTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGGAGTAACCTCATTGCACCAAAAAAACTACCTGGGACTTTTCTT  200

seq1  CCATCTTGATCAAGTAAGTAGAGATGGCTTGATCTGCTGAAGATTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTTGATCAAGTAAGTAGAGATGGCTTGATCTGCTGAAGATTCTTCT  250

seq1  TCTATTGTCATTAATTCTTATCTTTGCCCCATCTCAGGACTTTGTAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTCATTAATTCTTATCTTTGCCCCATCTCAGGACTTTGTAGCTA  300

seq1  TTCTATGCTTATGGGGTAACTTAATTTTATTGTAGAAGTGGCCTTTGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGCTTATGGGGTAACTTAATTTTATTGTAGAAGTGGCCTTTGTTG  350

seq1  ACGAATAAAGATGACTTTAAGCTTTATTATACCATAAATGAAATAACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAATAAAGATGACTTTAAGCTTTATTATACCATAAATGAAATAACAGA  400

seq1  GGAATCATAAACTTAAATGATTTATTGGGGTTACATTGGGATTATTTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCATAAACTTAAATGATTTATTGGGGTTACATTGGGATTATTTCAG  450

seq1  AATTAAATATTCCTAATTTAAGTCTTGTTCTATGGCACCACATATTGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATATTCCTAATTTAAGTCTTGTTCTATGGCACCACATATTGATG  500

seq1  TTGAACTCTTGAGGTTAACTGAGAGATCATAATTTTATTTCATGAAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCTTGAGGTTAACTGAGAGATCATAATTTTATTTCATGAAATCC  550

seq1  AACATTTATGAGAAGGGAAACTTTCAGGAGCCACTGGAGCTGTCCTACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTATGAGAAGGGAAACTTTCAGGAGCCACTGGAGCTGTCCTACTT  600

seq1  GAGAATTCTGAGCACATGTCACATCCAGAACAGGCAGTATGAAGCAAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCTGAGCACATGTCACATCCAGAACAGGCAGTATGAAGCAAGGC  650

seq1  AAATCTGAGCAAATATTCATATTTCTGTATAAGATGCAGTAAACATTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAGCAAATATTCATATTTCTGTATAAGATGCAGTAAACATTTGC  700

seq1  ATATACATAAATATTATCATAGCTTCAAGCAGCAAAATCTGTTTGAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACATAAATATTATCATAGCTTCAAGCAGCAAAATCTGTTTGAAATG  750

seq1  TAATAGAAATCTTACACAAAATAAAAGTATATTTAGAAGCTGATTATAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAAATCTTACACAAAATAAAAGTATATTTAGAAGCTGATTATAAA  800

seq1  CTTTAAAAAGTAGAGGAAAGTGCTCTTCAAATATCTCACGATACTTTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAAAGTAGAGGAAAGTGCTCTTCAAATATCTCACGATACTTTAAG  850

seq1  AATTGGTTTGTGTCTTTGAACTTCATTTTTCACATGAATTGAAATATCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGTTTGTGTCTTTGAACTTCATTTTTCACATGAATTGAAATATCAC  900

seq1  AGAATATAAAATTGAGGTAACTTGATCAAAATAAATGCACTTAAAATGAA  950
      || |||| |||||||||||||||||||||||||||||||||| |||||||
seq2  AG-ATAT-AAATTGAGGTAACTTGATCAAAATAAATGCACTT-AAATGAA  947

seq1  ACCTAAGTATAGAAAATGTAAGTGATTAACTTCAACCAGTAGCCACTATA  1000
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  ACCTAAGTATAGAAAATGT-AGTGATTAACTTC-ACCAGTAGCCACTATA  995

seq1  ATTACTTATTTCTTTTAAAATACAAATGAATGTTGGTGGTTTTATTTATT  1050
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  ATTACTTATTTCTTTTAAAATA-AAATGAATGTTGGTGG-TTTATTTATT  1043

seq1  TGTCCTTTAGGTAATATAACATTCTTTTGAG  1081
      ||||||||||||||||| |||||||||||||
seq2  TGTCCTTTAGGTAATATTACATTCTTTTGAG  1074