BAC Information

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BAC

Clone NameB6Ng01-141F08
Chromosome2 (Build37)
Map Location 80,693,970 - 80,694,943
singlet/doubletsinglet
Overlap genenone
Upstream genePde1a, LOC668005, Prdx6-rs1, Dnajc10, Frzb, Nckap1, LOC624223, Dusp19, LOC672381, Nup35, LOC103324
Downstream geneLOC668027, LOC100040624, LOC100040655, LOC100040704
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141F08.bB6Ng01-141F08.g
ACCDH939817DH939818
length9771,229
definitionDH939817|Mus musculus domesticus DNA, BAC clone: B6Ng01-141F08, 5' end.DH939818|Mus musculus domesticus DNA, BAC clone: B6Ng01-141F08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcctcacaggctagaaccacatgagaagtctgtgaagtgtca
agttaatgagttgtccctcatgtggatgaagaatgtcttagggttactac
tgctgtgatcaaaacaccaggacttggggaggaaaggggttacttcattc
atagtcccatataacagtttatcatcaaaagcaataagggcaggaactcc
agcagggcaggaacctgggagcaggagttaaagcagagaccatggaaggg
tgttacctattggcttcctctttgtggcttgctcagcctgttttcttata
gaagccagaaccacccctccagagatgccactacatacaacaggctaacc
cccccccccccaggaatcactaattaagaatcctgactccagcttctgtc
aagttgactgaatattagcaagtacaaggtatcatggccagagaagtaaa
acaacatgttgaagttcacacagcaatagggtgtatgtgtgcaaagcctt
tccaggatcaagaaactgtctgctccaaaggcaagttctgttatttcttg
aaaaggacttatcagaagatttaagtaagttcagagctttgatgcatatg
ttgatacttatgaatatatttttttaatgactgtcctgtagtttcttgaa
taaatactgttttcatagagaattgtctttttgatgctgatgagacaaat
cctgtctcaaaattaccatagtagcttggacatgtcaatcacctttgagg
ggaaatggtaaaagaaatgacgcaccatattccaaacgcaccaatcttct
atactgtgctgaagagctgccacggataatcaacgttctcagggaaagca
ggaggactttttataaagtttatttcctcttttgaaaaagatctgttact
gcctactatgtggtctattcctgtgtttaggtgagatgaattatataagg
attaataaattaatcccctgcctttgc
gaattcacagagtttgatccccacgtgctctgaaatgcctaggatcacag
gatcacagaaaaagctcaactcttaggagatctcacacacccaggagcac
tggagctctgacacactcaagatcacggctgaggccacacatctttccca
acacccagcctaactagaacccccacaggaaccagggaaacacaaacccc
cacccagccagaggtacaggttccttccagcttgtacctttgcctggagc
aaacccagggctctggatccccacacacccctgcaacacccagagaaagc
ttgactcccaggagctctgacacaacaagatctcaggagcttggtcacac
caggatttcaggatcccagaggcagcttgactcccaggatctcggacaca
cccaggatctcaggatcccaggatcccagaattataggatcacagagaca
gctgaactctgaggagttttgacataaccaggatcacaggagggacagtc
tctagtcagagatagcaagggcagttaacactagagataaccagatgggg
agaggcaacagaaatcaaggctacttggcatcatcagaacctagttcttc
caaccctgcaaatcctagataacatgtcacactggaaaagcaagatttag
atttaaaatcacttttcatgatgataatagagcactttaagaaggacata
aataactcccttaaagaaatacaagaaaacacaggtaaacaggtagaaac
ccttaaagatgaaacacacaaattcccttaaaaaattacaggaaaacaca
accaagcaggtgaaggaattgaacaaaaccgtccacgatctaaaaaatgg
aaatagaaacaataacgaaatcacaagagagacaacctagagattgaaaa
ctcaggaaaggggtcaggactattagacacaacatcaccacaggacacaa
agatagagagagaatctcagggcagaggttcatagaaactttgacacaac
agtcaagaaaatgcaaatacccaaacatcagaaactcagacatatgagaa
gaccaaacgaggataaggcatgaagaaagcagagatcccagaacgggcag
ttatatctcacagaaaataaggaagaagcttctatctagagagagagccc
tggacattcaatcctagaaccatgattgaacaagaaaattctctccgtcc
cgatgttttaagcaccaatgccgacgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_80693970_80694943
seq2: B6Ng01-141F08.b_46_1019 (reverse)

seq1  AAGGCAGGGTATCATTTTATTAATCTTTATATATTTCATCTCACCT-AAC  49
      ||||||||| || | |||||||||| ||||||| |||||||||||| |||
seq2  AAGGCAGGGGATTAATTTATTAATCCTTATATAATTCATCTCACCTAAAC  50

seq1  ACAGGAATAGA-CACATAGTAGGCAGTAACAGATTCTTTTTCCAAAGAGG  98
      ||||||||||| ||||||||||||||||||||| |||||||| |||||||
seq2  ACAGGAATAGACCACATAGTAGGCAGTAACAGA-TCTTTTTCAAAAGAGG  99

seq1  AAATAAACCTTTAT-AAGAGTCCTCCTGCTCTCCCTGAGAACGTTGATTA  147
      ||||||| |||||| || |||||||||||| |||||||||||||||||||
seq2  AAATAAA-CTTTATAAAAAGTCCTCCTGCTTTCCCTGAGAACGTTGATTA  148

seq1  -CCGTGGCAGCTC-TCAGCACAGTATAGAAGATTGGTGCGTTTTGGAATA  195
       |||||||||||| |||||||||||||||||||||||||| |||||||||
seq2  TCCGTGGCAGCTCTTCAGCACAGTATAGAAGATTGGTGCG-TTTGGAATA  197

seq1  TGGTGCGTCATTTCTTTTTACCATTTCCCCTCAAAGGTGATTGACATGTC  245
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGGTGCGTCATTTC-TTTTACCATTTCCCCTCAAAGGTGATTGACATGTC  246

seq1  CAAGCTACTATGGTAATTTTGAGACAGGATTTGTCTCATCAGCATCAAAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTACTATGGTAATTTTGAGACAGGATTTGTCTCATCAGCATCAAAA  296

seq1  AGACAATTCTCTATGAAAACAGTATTTATTCAAGAAACTACAGGACAGTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATTCTCTATGAAAACAGTATTTATTCAAGAAACTACAGGACAGTC  346

seq1  ATTAAAAAAATATATTCATAAGTATCAACATATGCATCAAAGCTCTGAAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAAAATATATTCATAAGTATCAACATATGCATCAAAGCTCTGAAC  396

seq1  TTACTTAAATCTTCTGATAAGTCCTTTTCAAGGAATAACAGAACTTGCCT  445
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTACTTAAATCTTCTGATAAGTCCTTTTCAAGAAATAACAGAACTTGCCT  446

seq1  TTGGAGCAGACAGTTTCTTGATCCTGGAAAGGCTTTGCACACATACACCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGCAGACAGTTTCTTGATCCTGGAAAGGCTTTGCACACATACACCC  496

seq1  TATTGCTGTGTGAACTTCAACATGTTGTTTTACTTCTCTGGCCATGATAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTGTGTGAACTTCAACATGTTGTTTTACTTCTCTGGCCATGATAC  546

seq1  CTTGTACTTGCTAATATTCAGTCAACTTGACAGAAGCTGGAGTCAGGATT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACTTGCTAATATTCAGTCAACTTGACAGAAGCTGGAGTCAGGATT  596

seq1  CTTAATTAGTGATTCCTGGGGGGGGGGGGGGTTAGCCTGTTGTATGTAGT  645
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTTAATTAGTGATTCCT-GGGGGGGGGGGGGTTAGCCTGTTGTATGTAGT  645

seq1  GGCATCTCTGGAGGGGTGGTTCTGGCTTCTATAAGAAAACAGGCTGAGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTCTGGAGGGGTGGTTCTGGCTTCTATAAGAAAACAGGCTGAGCA  695

seq1  AGCCACAAAGAGGAAGCCAATAGGTAACACCCTTCCATGGTCTCTGCTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAAAGAGGAAGCCAATAGGTAACACCCTTCCATGGTCTCTGCTTT  745

seq1  AACTCCTGCTCCCAGGTTCCTGCCCTGCTGGAGTTCCTGCCCTTATTGCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTGCTCCCAGGTTCCTGCCCTGCTGGAGTTCCTGCCCTTATTGCT  795

seq1  TTTGATGATAAACTGTTATATGGGACTATGAATGAAGTAACCCCTTTCCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATGATAAACTGTTATATGGGACTATGAATGAAGTAACCCCTTTCCT  845

seq1  CCCCAAGTCCTGGTGTTTTGATCACAGCAGTAGTAACCCTAAGACATTCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAGTCCTGGTGTTTTGATCACAGCAGTAGTAACCCTAAGACATTCT  895

seq1  TCATCCACATGAGGGACAACTCATTAACTTGACACTTCACAGACTTCTCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCACATGAGGGACAACTCATTAACTTGACACTTCACAGACTTCTCA  945

seq1  TGTGGTTCTAGCCTGTGAGGAGAGAATTC  974
      |||||||||||||||||||||||||||||
seq2  TGTGGTTCTAGCCTGTGAGGAGAGAATTC  974