BAC Information

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BAC

Clone NameB6Ng01-141J14
Chromosome2 (Build37)
Map Location 115,485,783 - 115,609,341
singlet/doubletdoublet
Overlap geneBC052040
Upstream geneLOC100043219, LOC100043222, LOC100043232, LOC100043236
Downstream geneMrg1, G630016G05Rik, 2810405F15Rik, LOC433464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141J14.bB6Ng01-141J14.g
ACCDH940018DH940019
length1,0841,031
definitionDH940018|Mus musculus domesticus DNA, BAC clone: B6Ng01-141J14, 5' end.DH940019|Mus musculus domesticus DNA, BAC clone: B6Ng01-141J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,485,783 - 115,486,880)(115,608,288 - 115,609,341)
sequence
gaattcatagtgaagttaacgtccgcataatttaatgatatacagatttt
aattatatagtacactgttaattgcacggctatttttagatcagggttcc
aacttattcagttaaatgaataactcacttgctcaaggtatcaaaatatg
ggccttcttaaaaacttgtactcaagcctctgcatatttttttaaacctg
atagattattctgctgtttgtttctccttggaatgagggtgacctgtacc
ttgccttcagctcctagcacctcacacataggaccttgaccttcctttga
gggaagggggcagacaagctctgataactagtacagtataagaaagctgt
acagactatccttgtgttggataatgggcagagattgaatagctgtgttt
tccttgaaagttgagatctccccttctccccacgagagaattagaagaaa
gtgatttctaaatagaagtgccagtccctggctgtaattagtcacatggg
cttggttcccaggaagtgtgtttctttcagtgtactgaaagtgtgtggat
ttcagagttgtttaactactgtgaatgtgcactctagactccttatccgc
acctcttgtaaaatttagaaagaaatttgggttctccatttccaattgga
tgaggtcatttgccaggaatacgcactagttcttgcctatgcactctatc
attgcacgaatccctgtaatcctggacagcagttttaatgacttagaatt
agcttctctctaattgaacactctgacagacctcatgatgtggtgtgggt
ctttgccagcaaatagaaacctagaagatataaataagtgggctgtgtct
gaaagtcttgtctcaagagagacctgctctctctccactgaatagtgtaa
gcttggccatccatacaggcagccgctgtggcctcacagttaggagagtc
cgatttcctttcctctgtagacatagactcaatatcttgtcagtttcagt
tctttgctatgtgtattcttacagacagggtctcatctgtagacagcttt
ccatactgggagccagcctagtcctgactgcgag
gaattctataccatttgcttagaatgcttttgtacttgacatgagtgccc
acatattacctacactgaggacgaaagcctgtgtccagagccgagctgaa
cctgaccttggagcctatcctaatagcagcaattccagtaccataggcaa
gtacaaaattatttgctgaacagagagtttggctaaaatactttattgaa
atctctacacatctccttctcttcctgtaatgattgcctcttctgcaaat
ttcgggacttctgttgtttccattttgatgagtaactattttttttctaa
gtttctttttatttattttttatttacatattttcattaccctaaaaaag
ttccccaatacttctaagacttttaaatacacactggagatctgataagt
atttgtgtcttaaatagccttagtgctagaaatacatcaggaatattgac
tatcacagatggacaggtctcatgggtacctgtatgatggggcagttctc
tctagatgtttatggaaactatggaaaactggtggtacatgtttccaact
tgaggaaacagaatgcctttggttttcaaatgatgagacacttgaattag
tgactaataaggatgcacccactgaggagtgtggacatcttctctttaaa
ggtcagatcccataggctaaggatgagagatgctttctctaaaaccagcc
agccactttcatggccaggaagcatttggacatgaactagatattataag
aaggagcaacaaaagtgtcagttttagggagtttgatgacaccccaaata
gtaccagttatagggagtctgacaacaccccaaatagttccaatctctgt
attaaatacttggatttggggcctattggatgttaagggtaattatgtta
atatagatttaaacataaagtagtctatcttaaaagaaaatatgatttct
atactgtaacagctcatggataaattagtagtgaattcccttaaagtatg
tgtctcaaactttcttcagatttgcttgaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115485783_115486880
seq2: B6Ng01-141J14.b_48_1131

seq1  GAATTCATAGTGAAGTTAACGTCCGCATAATTTAATGATATACAGATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGTGAAGTTAACGTCCGCATAATTTAATGATATACAGATTTT  50

seq1  AATTATATAGTACACTGTTAATTGCACGGCTATTTTTAGATCAGGGTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATAGTACACTGTTAATTGCACGGCTATTTTTAGATCAGGGTTCC  100

seq1  AACTTATTCAGTTAAATGAATAACTCACTTGCTCAAGGTATCAAAATATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATTCAGTTAAATGAATAACTCACTTGCTCAAGGTATCAAAATATG  150

seq1  GGCCTTCTTAAAAACTTGTACTCAAGCCTCTGCATATTTTTTTAAACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTCTTAAAAACTTGTACTCAAGCCTCTGCATATTTTTTTAAACCTG  200

seq1  ATAGATTATTCTGCTGTTTGTTTCTCCTTGGAATGAGGGTGACCTGTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTATTCTGCTGTTTGTTTCTCCTTGGAATGAGGGTGACCTGTACC  250

seq1  TTGCCTTCAGCTCCTAGCACCTCACACATAGGACCTTGACCTTCCTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCAGCTCCTAGCACCTCACACATAGGACCTTGACCTTCCTTTGA  300

seq1  GGGAAGGGGGCAGACAAGCTCTGATAACTAGTACAGTATAAGAAAGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGGGGCAGACAAGCTCTGATAACTAGTACAGTATAAGAAAGCTGT  350

seq1  ACAGACTATCCTTGTGTTGGATAATGGGCAGAGATTGAATAGCTGTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACTATCCTTGTGTTGGATAATGGGCAGAGATTGAATAGCTGTGTTT  400

seq1  TCCTTGAAAGTTGAGATCTCCCCTTCTCCCCACGAGAGAATTAGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAAAGTTGAGATCTCCCCTTCTCCCCACGAGAGAATTAGAAGAAA  450

seq1  GTGATTTCTAAATAGAAGTGCCAGTCCCTGGCTGTAATTAGTCACATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCTAAATAGAAGTGCCAGTCCCTGGCTGTAATTAGTCACATGGG  500

seq1  CTTGGTTCCCAGGAAGTGTGTTTCTTTCAGTGTACTGAAAGTGTGTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTCCCAGGAAGTGTGTTTCTTTCAGTGTACTGAAAGTGTGTGGAT  550

seq1  TTCAGAGTTGTTTAACTACTGTGAATGTGCACTCTAGACTCCTTATCCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTTGTTTAACTACTGTGAATGTGCACTCTAGACTCCTTATCCGC  600

seq1  ACCTCTTGTAAAATTTAGAAAGAAATTTGGGTTCTCCATTTCCAATTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTGTAAAATTTAGAAAGAAATTTGGGTTCTCCATTTCCAATTGGA  650

seq1  TGAGGTCATTTGCCAGGAATACGCACTAGTTCTTGCCTATGCACTCTATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCATTTGCCAGGAATACGCACTAGTTCTTGCCTATGCACTCTATC  700

seq1  ATTGCACGAATCCCTGTAATCCTGGACAGCAGTTTTAATGACTTAGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCACGAATCCCTGTAATCCTGGACAGCAGTTTTAATGACTTAGAATT  750

seq1  AGCTTCTCTCTAATTGAACACTCTGACAGACCTCATGATGTGGTGTGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCTCTCTAATTGAACACTCTGACAGACCTCATGATGTGGTGTGGGT  800

seq1  CTTTGCCAGCAAATAGAAACCTAGAAGATATAAATAAGTGGGCTGTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCCAGCAAATAGAAACCTAGAAGATATAAATAAGTGGGCTGTGTCT  850

seq1  GAAAGTCTTGTCTCAAGAGAGACCTGCTCTCTCTCCACTGAATAGTGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTTGTCTCAAGAGAGACCTGCTCTCTCTCCACTGAATAGTGTAA  900

seq1  GCTTGGCCATCCATACAGCCAGCCGCTGTGGCCTCACAGTTAGGAGAGTC  950
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCTTGGCCATCCATACAGGCAGCCGCTGTGGCCTCACAGTTAGGAGAGTC  950

seq1  CGATTTCCTTTCCTCTGTAGACCATAAGAACTCAATATCTTGTCAGGTTT  1000
      ||||||||||||||||||||| ||||   |||||||||||||||||  ||
seq2  CGATTTCCTTTCCTCTGTAGA-CATA--GACTCAATATCTTGTCAG--TT  995

seq1  CCAGTTCTTTGCTTATGTGTTATTCTTACAGACAGGGTCTCATCCTGTAG  1050
       ||||||||||| |||||| ||||||||||||||||||||||| ||||||
seq2  TCAGTTCTTTGC-TATGTG-TATTCTTACAGACAGGGTCTCAT-CTGTAG  1042

seq1  ACCAGGCTTTCCCATACTGTGGAGCCCAAGCTAGTCCTGTACTGCGAG  1098
      ||   ||||| |||||||| |||| |||  ||||||||| ||||||||
seq2  AC--AGCTTT-CCATACTG-GGAG-CCAGCCTAGTCCTG-ACTGCGAG  1084

seq1: chr2_115608288_115609341
seq2: B6Ng01-141J14.g_67_1097 (reverse)

seq1  TTTCAAAGCAAATTTATGAAGAATATTTTTTGAGACACACTACTTTTAAG  50
      |||| |||||||  | |||||||     ||||||||||| ||||||  | 
seq2  TTTC-AAGCAAA--TCTGAAGAA---AGTTTGAGACACA-TACTTT--AA  41

seq1  GGGAATTCACTACTAATTTTATCCACTGAGCTGTTAACAGTATTAGAAAT  100
      |||||||||||||||| |||||||| ||||||||| |||||| |||||||
seq2  GGGAATTCACTACTAA-TTTATCCA-TGAGCTGTT-ACAGTA-TAGAAAT  87

seq1  CATATTTTTCTTTTAAAGATAGACTTACCTTTATGTTTTAAATTCTATTA  150
      |||| ||||||||| ||||||||||   ||||||||||  || |||| ||
seq2  CATA-TTTTCTTTT-AAGATAGACT--ACTTTATGTTT--AAATCTA-TA  130

seq1  TTAACATAATTACCCTTAACATCCAATTAGGCCCCAAATCCAAGTATTTA  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTAACATAATTACCCTTAACATCCAA-TAGGCCCCAAATCCAAGTATTTA  179

seq1  ATACAGAGAATTGGAACTATTTGGGGTGTTGTCAGACTCCCTATAACTGG  250
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAG-ATTGGAACTATTTGGGGTGTTGTCAGACTCCCTATAACTGG  228

seq1  TACTATTTGGGGTGTCATCAAACTCCCTAAAACTGACACTTTTTGTTGCT  300
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TACTATTTGGGGTGTCATCAAACTCCCTAAAACTGACAC-TTTTGTTGCT  277

seq1  CCTTCTTATAATATCTAGTTCATGTCCAAATGCTTCCTGGCCATGAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTATAATATCTAGTTCATGTCCAAATGCTTCCTGGCCATGAAAGT  327

seq1  GGCTGGCTGGTTTTAGAGAAAGCATCTCTCATCCTTAGCCTATGGGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCTGGTTTTAGAGAAAGCATCTCTCATCCTTAGCCTATGGGATCT  377

seq1  GACCTTTAAAGAGAAGATGTCCACACTCCTCAGTGGGTGCATCCTTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTAAAGAGAAGATGTCCACACTCCTCAGTGGGTGCATCCTTATTA  427

seq1  GTCACTAATTCAAGTGTCTCATCATTTGAAAACCAAAGGCATTCTGTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAATTCAAGTGTCTCATCATTTGAAAACCAAAGGCATTCTGTTTC  477

seq1  CTCAAGTTGGAAACATGTACCACCAGTTTTCCATAGTTTCCATAAACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTTGGAAACATGTACCACCAGTTTTCCATAGTTTCCATAAACATC  527

seq1  TAGAGAGAACTGCCCCATCATACAGGTACCCATGAGACCTGTCCATCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGAACTGCCCCATCATACAGGTACCCATGAGACCTGTCCATCTGT  577

seq1  GATAGTCAATATTCCTGATGTATTTCTAGCACTAAGGCTATTTAAGACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTCAATATTCCTGATGTATTTCTAGCACTAAGGCTATTTAAGACAC  627

seq1  AAATACTTATCAGATCTCCAGTGTGTATTTAAAAGTCTTAGAAGTATTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTTATCAGATCTCCAGTGTGTATTTAAAAGTCTTAGAAGTATTGG  677

seq1  GGAACTTTTTTAGGGTAATGAAAATATGTAAATAAAAAATAAATAAAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTTTTTAGGGTAATGAAAATATGTAAATAAAAAATAAATAAAAAG  727

seq1  AAACTTAGAAAAAAAATAGTTACTCATCAAAATGGAAACAACAGAAGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGAAAAAAAATAGTTACTCATCAAAATGGAAACAACAGAAGTCC  777

seq1  CGAAATTTGCAGAAGAGGCAATCATTACAGGAAGAGAAGGAGATGTGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAATTTGCAGAAGAGGCAATCATTACAGGAAGAGAAGGAGATGTGTAG  827

seq1  AGATTTCAATAAAGTATTTTAGCCAAACTCTCTGTTCAGCAAATAATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCAATAAAGTATTTTAGCCAAACTCTCTGTTCAGCAAATAATTTT  877

seq1  GTACTTGCCTATGGTACTGGAATTGCTGCTATTAGGATAGGCTCCAAGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGCCTATGGTACTGGAATTGCTGCTATTAGGATAGGCTCCAAGGT  927

seq1  CAGGTTCAGCTCGGCTCTGGACACAGGCTTTCGTCCTCAGTGTAGGTAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCAGCTCGGCTCTGGACACAGGCTTTCGTCCTCAGTGTAGGTAAT  977

seq1  ATGTGGGCACTCATGTCAAGTACAAAAGCATTCTAAGCAAATGGTATAGA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGGCACTCATGTCAAGTACAAAAGCATTCTAAGCAAATGGTATAGA  1027

seq1  ATTC  1054
      ||||
seq2  ATTC  1031