BAC Information

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BAC

Clone NameB6Ng01-141O07
Chromosome2 (Build37)
Map Location 7,475,234 - 7,643,652
singlet/doubletdoublet
Overlap genenone
Upstream geneCugbp2, LOC100040659, LOC100040648
Downstream geneLOC672230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141O07.bB6Ng01-141O07.g
ACCDH940230DH940231
length493251
definitionDH940230|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O07, 5' end.DH940231|Mus musculus domesticus DNA, BAC clone: B6Ng01-141O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,475,234 - 7,475,732)(7,643,402 - 7,643,652)
sequence
tgtaaagtaaaactatccatagatcactagaagatcatcaacactaagtg
attcttgagctcatcttacttagacattgataattgccttggcctttctc
agttgggagccaattctttgtgagcctttcagttcttaaatattttggga
gaggtgatctttgttttatactatggtttccaggattgttgtctactcag
tactattgaaaaataaagtcttcccttcacagaaaaaagtggaagcatag
ttactgcccatgaaataggacttgggaaatctaagtaagcactggggtct
ttcctgtaaaaatctcaccaagacagtgatatcactccactctcctcata
ttgacatgtgcgaactgagaattggacagcatataaaatcagggcataat
aatggtgtgaatctaacagtatctttacatttttacctattttttactat
ggtgtgtatattcattgtgtgtgtgtgtgtgtgtgtgtgtgtg
atgaaataggatggctgcttcaagacaagaagtttagacagccatagtgg
tacatgcatttttacattctcaccaacttgggaggctgtggggggtagac
caggagccctgagctttcccaggcaaagacagtaatctttccccatctca
agaacaatggaatgaaggagaggcgaatgaagtggaagggaaggaaagta
gaagagcaaagagaagggaaggagagggaggggaaaggagaggaggagag
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_7475234_7475732
seq2: B6Ng01-141O07.b_50_548

seq1  GAATTCTGTAAAGTAAAACTATCCATAGATCACTAGAAGATCATCAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTAAAGTAAAACTATCCATAGATCACTAGAAGATCATCAACAC  50

seq1  TAAGTGATTCTTGAGCTCATCTTACTTAGACATTGATAATTGCCTTGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGATTCTTGAGCTCATCTTACTTAGACATTGATAATTGCCTTGGCC  100

seq1  TTTCTCAGTTGGGAGCCAATTCTTTGTGAGCCTTTCAGTTCTTAAATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAGTTGGGAGCCAATTCTTTGTGAGCCTTTCAGTTCTTAAATATT  150

seq1  TTGGGAGAGGTGATCTTTGTTTTATACTATGGTTTCCAGGATTGTTGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAGAGGTGATCTTTGTTTTATACTATGGTTTCCAGGATTGTTGTCT  200

seq1  ACTCAGTACTATTGAAAAATAAAGTCTTCCCTTCACAGAAAAAAGTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTACTATTGAAAAATAAAGTCTTCCCTTCACAGAAAAAAGTGGAA  250

seq1  GCATAGTTACTGCCCATGAAATAGGACTTGGGAAATCTAAGTAAGCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTTACTGCCCATGAAATAGGACTTGGGAAATCTAAGTAAGCACTG  300

seq1  GGGTCTTTCCTGTAAAAATCTCACCAAGACAGTGATATCACTCCACTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTTCCTGTAAAAATCTCACCAAGACAGTGATATCACTCCACTCTC  350

seq1  CTCATATTGACATGTGCGAACTGAGAATTGGACAGCATATAAAATCAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTGACATGTGCGAACTGAGAATTGGACAGCATATAAAATCAGGG  400

seq1  CATAATAATGGTGTGAATCTAACAGTATCTTTACATTTTTACCTATTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAATGGTGTGAATCTAACAGTATCTTTACATTTTTACCTATTTTT  450

seq1  TACTATGGTGTGTATATTCATTGTGTGTGTGTGTGTGTGTGTGTGTGTG  499
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGGTGTGTATATTCATTGTGTGTGTGTGTGTGTGTGTGTGTGTG  499

seq1: chr2_7643402_7643652
seq2: B6Ng01-141O07.g_75_325 (reverse)

seq1  CCTCTCCTCCTCTCCTTTCCCCTCCCTCTCCTTCCCTTCTCTTTGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCCTCTCCTTTCCCCTCCCTCTCCTTCCCTTCTCTTTGCTCTT  50

seq1  CTACTTTCCTTCCCTTCCACTTCATTCGCCTCTCCTTCATTCCATTGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTCCTTCCCTTCCACTTCATTCGCCTCTCCTTCATTCCATTGTTC  100

seq1  TTGAGATGGGGAAAGATTACTGTCTTTGCCTGGGAAAGCTCAGGGCTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATGGGGAAAGATTACTGTCTTTGCCTGGGAAAGCTCAGGGCTCCT  150

seq1  GGTCTACCCCCCACAGCCTCCCAAGTTGGTGAGAATGTAAAAATGCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTACCCCCCACAGCCTCCCAAGTTGGTGAGAATGTAAAAATGCATGT  200

seq1  ACCACTATGGCTGTCTAAACTTCTTGTCTTGAAGCAGCCATCCTATTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTATGGCTGTCTAAACTTCTTGTCTTGAAGCAGCCATCCTATTTCA  250

seq1  T  251
      |
seq2  T  251