BAC Information

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BAC

Clone NameB6Ng01-141P22
Chromosome2 (Build37)
Map Location 143,072,322 - 143,192,355
singlet/doubletdoublet
Overlap geneLOC668915
Upstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor
Downstream geneLOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1, 4930517K23Rik, LOC627160, EG433481, Snx5, 8430406I07Rik, Ovol2, Ppia-ps2_1789.1, LOC635097
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141P22.bB6Ng01-141P22.g
ACCDH940306DH940307
length1,0941,122
definitionDH940306|Mus musculus domesticus DNA, BAC clone: B6Ng01-141P22, 5' end.DH940307|Mus musculus domesticus DNA, BAC clone: B6Ng01-141P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(143,191,269 - 143,192,355)(143,072,322 - 143,073,467)
sequence
gaattccacaagtggattcagtttgctttgccccctctaacaatattgat
cattttaaaaaatcctgtactttcagaagctttctttcccttctaattta
tcagtgcctctcaagtgtgtttcttgacctatttcacaaataaacccctg
cacttgagtgtgtatggagtcattccctgtgtctgagggtcccatgcaat
ttctacagttccacttcgagaaggacaaagtttaaattcatcatgatttg
gtcaagaatgatttgactatcaaaacttcattctgatacattttaacttg
taggatgtgtctaagttctgaaatgggcaatgcaagtcctattctggctt
cttttccatatgtgaagtgggatatgtgctcaataaagatattctatgaa
aagctgcagggatggctcaagttccctgagagctggtgtagcacttctac
atagctcaggagttggcagaactgagttcgggggagagggtggggggcgc
gtaccatggtaacatcagattaaaaatccaaggctaaaatagaaatgagt
ttagagaacattattgttcaaatcaggcatgtttcagagttcacaacctt
cgttctccacctaactcgaatcatagaaaacagagactcatatgtttcgt
tgtgtgcacacaaacctggtgtttactggatattgaagagaatggcattt
caaagatgcagagaggggcagtggctttccttaatcttttttcttggtag
cagattgaatcagaagaccccccacctattcccttcccattcagagtagt
tctcaatttctcgtttttgatttcccctcccctgtaatctaattaaagta
tccatttgcacccaaaggttagcaggccacttttggttcagctctgaatt
tcccaaatggtcctatacttgatgatctgcaagcaatgactgcaaagtct
aacttttccccatccttggtggccagtggtgcacttcagggagggtttaa
atcctaagactgcaatgcttacccatctggtgaggtggtaggttgaattt
caagcatctccgaaatatatcttattgcctttccaaggcagtcc
gaattcactcgtgagacaggaatgagtattctgaaagtggaaaagaagga
ggcaaatcgggccagaactacacaggatggtggttgactgggttggtcct
caccaccatcagattcttcaaactcttgttttcccttcccagtagtgttc
actttgcattattggttttcatgttgatgccttttgaagatctgctcatt
gggccagtgtatccactttgtagaataagaattgccttcaggcttaagac
ccaatgagtcacactcagcaaaagtagtgagtacgagatagggaagctta
gctcgatggttctttatctccctaacgttgtggctctttaatacagttct
acatgttgtggtgactcccaaccataacagcattttcattgcaccttcat
aactgtaatgtcgctactgttgtgaatcatgatgtatatatctttggaga
taaaggtttatctacagggttgtgacccacagattggaaactgctggctt
cttctcctctttgggcaacctttgcaacacagctctttggaagctgaggc
tgaggcagggattttgactaaaagcacacctggctcagttttctcttgtg
ttcttgcttctctactccctgcctggttccttgagaaagcatttcttctg
tgagtttctgatagattcttgtttgacacaagctcttagaaatctacttt
aatattctcttcagtggatggtgatatcttttagacagcacccaagcatg
tttgttcagactatctcagggatgtagacacagagatagtattctgaact
gttttattgggaaacaacataccaggaattaagatgagcctcagtctccc
aatgacaagaatacacagtgacattgttactttcagaactacatttagga
gactgataaactggctttgacagagataatcactctctcagtcatcagaa
gctaatagctttgccactggatgtctcagtagagaatacatggaagctaa
tctgagctgaagaaagggtctaccatgtctgcgaaagaaattcacctgga
aactgggagcgaagtgataaattatctaccaatgagccaattgcgagaac
ctgatagaagaggttttcttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_143191269_143192355
seq2: B6Ng01-141P22.b_47_1140 (reverse)

seq1  GGACTGGCTTGAGAAAGCAATAAGATATATTTGGGAGAATGGCTTGAAAT  50
      |||||| ||||  || |||||||||||||||| |||||   |||||||||
seq2  GGACTGCCTTGGAAAGGCAATAAGATATATTTCGGAGA--TGCTTGAAAT  48

seq1  TCAA-CTACCACCTCA-CAGATGGTGTATGCATTGCAGTCTTAGGATTTA  98
      |||| ||||||||||| ||||||| ||| |||||||||||||||||||||
seq2  TCAACCTACCACCTCACCAGATGG-GTAAGCATTGCAGTCTTAGGATTTA  97

seq1  AA-CCTCCCTGAAGTGCA-CACTGGCCACCAAGGATGGGG-AAAGTTAGA  145
      || ||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  AACCCTCCCTGAAGTGCACCACTGGCCACCAAGGATGGGGAAAAGTTAGA  147

seq1  CTTTGCAGTCATTGCTTGCAGATCATCAAGTATA-GACCATTTGGGAAAT  194
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTTGCAGTCATTGCTTGCAGATCATCAAGTATAGGACCATTTGGGAAAT  197

seq1  TCAGAGCTGAA-CAAAAGT-GCCTGCTAACTTTGGGTTGCAAATGGATAC  242
      ||||||||||| ||||||| |||||||||| || || |||||||||||||
seq2  TCAGAGCTGAACCAAAAGTGGCCTGCTAACCTTTGGGTGCAAATGGATAC  247

seq1  TTTAATTAGATTACAGGGGAGGGGAAATC-AAAACGAGAAATTGAGAACT  291
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTAATTAGATTACAGGGGAGGGGAAATCAAAAACGAGAAATTGAGAACT  297

seq1  ACTCTGAATGGGAAGGGAATAGGTGGGGGGTCTTCTGATTCAATCTGCTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAATGGGAAGGGAATAGGTGGGGGGTCTTCTGATTCAATCTGCTA  347

seq1  CCAAG-AAAAAGATTAAGGAAAGCCACTGCCCCTCTCTGCATCTTTGAAA  390
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAAAAAGATTAAGGAAAGCCACTGCCCCTCTCTGCATCTTTGAAA  397

seq1  TGCCATTCTCTTCAATATCCAGTAAACACCAGGTTTGTGTGCACACAACG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATTCTCTTCAATATCCAGTAAACACCAGGTTTGTGTGCACACAACG  447

seq1  AAACATATGAGTCTCTGTTTTCTATGATTCGAGTTAGGTGGAGAACGAAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATGAGTCTCTGTTTTCTATGATTCGAGTTAGGTGGAGAACGAAG  497

seq1  GTTGTGAACTCTGAAACATGCCTGATTTGAACAATAATGTTCTCTAAACT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAACTCTGAAACATGCCTGATTTGAACAATAATGTTCTCTAAACT  547

seq1  CATTTCTATTTTAGCCTTGGATTTTTAATCTGATGTTACCATGGTACGCG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTATTTTAGCCTTGGATTTTTAATCTGATGTTACCATGGTACGCG  597

seq1  CCCCCCACCCTCTCCCCCGAACTCAGTTCTGCCAACTCCTGAGCTATGTA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCTCTCCCCCGAACTCAGTTCTGCCAACTCCTGAGCTATGTA  647

seq1  GAAGTGCTACACCAGCTCTCAGGGAACTTGAGCCATCCCTGCAGCTTTTC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCTACACCAGCTCTCAGGGAACTTGAGCCATCCCTGCAGCTTTTC  697

seq1  ATAGAATATCTTTATTGAGCACATATCCCACTTCACATATGGAAAAGAAG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATATCTTTATTGAGCACATATCCCACTTCACATATGGAAAAGAAG  747

seq1  CCAGAATAGGACTTGCATTGCCCATTTCAGAACTTAGACACATCCTACAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATAGGACTTGCATTGCCCATTTCAGAACTTAGACACATCCTACAA  797

seq1  GTTAAAATGTATCAGAATGAAGTTTTGATAGTCAAATCATTCTTGACCAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATGTATCAGAATGAAGTTTTGATAGTCAAATCATTCTTGACCAA  847

seq1  ATCATGATGAATTTAAACTTTGTCCTTCTCGAAGTGGAACTGTAGAAATT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATGAATTTAAACTTTGTCCTTCTCGAAGTGGAACTGTAGAAATT  897

seq1  GCATGGGACCCTCAGACACAGGGAATGACTCCATACACACTCAAGTGCAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGACCCTCAGACACAGGGAATGACTCCATACACACTCAAGTGCAG  947

seq1  GGGTTTATTTGTGAAATAGGTCAAGAAACACACTTGAGAGGCACTGATAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTATTTGTGAAATAGGTCAAGAAACACACTTGAGAGGCACTGATAA  997

seq1  ATTAGAAGGGAAAGAAAGCTTCTGAAAGTACAGGATTTTTTAAAATGATC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAGGGAAAGAAAGCTTCTGAAAGTACAGGATTTTTTAAAATGATC  1047

seq1  AATATTGTTAGAGGGGGCAAAGCAAACTGAATCCACTTGTGGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTTAGAGGGGGCAAAGCAAACTGAATCCACTTGTGGAATTC  1094

seq1: chr2_143072322_143073467
seq2: B6Ng01-141P22.g_70_1191

seq1  GAATTCACTCGTGAGACAGGAATGAGTATTCTGAAAGTGGAAAAGAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCGTGAGACAGGAATGAGTATTCTGAAAGTGGAAAAGAAGGA  50

seq1  GGCAAATCGGGCCAGAACTACACAGGATGGTGGTTGACTGGGTTGGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATCGGGCCAGAACTACACAGGATGGTGGTTGACTGGGTTGGTCCT  100

seq1  CACCACCATCAGATTCTTCAAACTCTTGTTTTCCCTCCCCAGTAGTGTTC  150
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CACCACCATCAGATTCTTCAAACTCTTGTTTTCCCTTCCCAGTAGTGTTC  150

seq1  ACTTTGCATTATTGGTTTTCATGTTGATGCCTTTTGAAGATCTGCTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCATTATTGGTTTTCATGTTGATGCCTTTTGAAGATCTGCTCATT  200

seq1  GGGCCAGTGTATCCACTTTGTAGAATAAGAATTGCCTTCAGGCTTAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTGTATCCACTTTGTAGAATAAGAATTGCCTTCAGGCTTAAGAC  250

seq1  CCAATGAGTCACACTCAGCAAAAGTAGTGAGTACGAGATAGGGAAGCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAGTCACACTCAGCAAAAGTAGTGAGTACGAGATAGGGAAGCTTA  300

seq1  GCTCGATGGTTCTTTATCTCCCTAACGTTGTGGCTCTTTAATACAGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGATGGTTCTTTATCTCCCTAACGTTGTGGCTCTTTAATACAGTTCT  350

seq1  ACATGTTGTGGTGACTCCCAACCATAACAGCATTTTCATTGCACCTTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTTGTGGTGACTCCCAACCATAACAGCATTTTCATTGCACCTTCAT  400

seq1  AACTGTAATGTCGCTACTGTTGTGAATCATGATGTATATATCTTTGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAATGTCGCTACTGTTGTGAATCATGATGTATATATCTTTGGAGA  450

seq1  TAAAGGTTTATCTACAGGGTTGTGACCCACAGATTGGAAACTGCTGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTTTATCTACAGGGTTGTGACCCACAGATTGGAAACTGCTGGCTT  500

seq1  CTTCTCCTCTTTGGGCAACCTTTGCAACACAGCTCTTTGGAAGCTGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCTCTTTGGGCAACCTTTGCAACACAGCTCTTTGGAAGCTGAGGC  550

seq1  TGAGGCAGGGATTTTGACTAAAAGCACACCTGGCTCAGTTTTCTCTTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGGATTTTGACTAAAAGCACACCTGGCTCAGTTTTCTCTTGTG  600

seq1  TTCTTGCTTCTCTACTCCCTGCCTGGTTCCTTGAGAAAGCATTTCTTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCTTCTCTACTCCCTGCCTGGTTCCTTGAGAAAGCATTTCTTCTG  650

seq1  TGAGTTTCTGATAGATTCTTGTTTGACACAAGCTCTTAGAAATCTACTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTCTGATAGATTCTTGTTTGACACAAGCTCTTAGAAATCTACTTT  700

seq1  AATATTCTCTTCAGTGGATGGTGATATCTTTTAGACAGCACCCAAGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTCTTCAGTGGATGGTGATATCTTTTAGACAGCACCCAAGCATG  750

seq1  TTTGTTCAGACTATCTCAGGGATGTAGACACAGAGATAGTATTCTGAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCAGACTATCTCAGGGATGTAGACACAGAGATAGTATTCTGAACT  800

seq1  GTTTTATTGGGAAACAACATACCAGGAATTAAGATGAGCCTCAGTCTCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTGGGAAACAACATACCAGGAATTAAGATGAGCCTCAGTCTCCC  850

seq1  AATGACAAGAATACACAGTGACATTGTTACTTTCAGAACTACATTTAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATGACAAGAATACACAGTGACATTGTTACTTTCAGAACTACATTTA-GG  899

seq1  AGACTGATAAACTGGCTTTTGACAGAGATAATCACCTCCTCTCAAGTCAT  950
      |||||||||||||||| ||||||||||||||||||   ||||| ||||||
seq2  AGACTGATAAACTGGC-TTTGACAGAGATAATCAC--TCTCTC-AGTCAT  945

seq1  CAGAAGCTAATAGCTTTGCCACTGGAATGTCTCAGTAAGAG-ATACATTG  999
      ||||||||||||||||||||||||| |||||||||| |||| ||||| ||
seq2  CAGAAGCTAATAGCTTTGCCACTGG-ATGTCTCAGT-AGAGAATACA-TG  992

seq1  GAAGCTAATCCTGAGGCTGAGAGAAAGGTGTC-ACCATGTACCTTGGGGA  1048
      ||||||||| |||| ||||| ||||||| ||| |||||||  ||  | ||
seq2  GAAGCTAAT-CTGA-GCTGA-AGAAAGG-GTCTACCATGT--CT--GCGA  1034

seq1  TAGAATATTCACCCTGAAAACTGAGAAGCAGAAAGTGATAAATTAACTCA  1098
       |||| ||||| |||| |||||| | |||   ||||||||||||| || |
seq2  AAGAA-ATTCA-CCTGGAAACTG-GGAGC--GAAGTGATAAATTATCT-A  1078

seq1  CACAATGACGCACAATGAGAG-ACTTGTATAGAAGAGAGGTTTTCTTCT  1146
      | |||||| ||  | || ||| || || |||||  ||||||||||||||
seq2  C-CAATGA-GCCAATTGCGAGAACCTG-ATAGA--AGAGGTTTTCTTCT  1122