BAC Information

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BAC

Clone NameB6Ng01-142B14
Chromosome2 (Build37)
Map Location 162,122,640 - 162,123,410
singlet/doubletsinglet
Overlap genePtprt
Upstream geneLOC383770
Downstream geneLOC100043895, LOC100043896, LOC100043696, LOC497655, LOC668947, Sfrs6, L3mbtl, LOC241765, Sgk2, Ift52, Mybl2, 2410116G06Rik, LOC269389
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142B14.bB6Ng01-142B14.g
ACCDH940382DH940383
length1,207772
definitionDH940382|Mus musculus domesticus DNA, BAC clone: B6Ng01-142B14, 5' end.DH940383|Mus musculus domesticus DNA, BAC clone: B6Ng01-142B14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatcttttaagggggctatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaatcctcgatcttaaagcacaagccattgctgtt
ctattcaggaattttttccctgtgcccatatcttcgagacttttccccac
tttctcctctataagtttcagtgtctctggttttatgtggagttccttga
tccacttagatttgaccttagtacaaggagagaggaatgggtcgatttgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttttttccactggacggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattcagttg
gtctacttgtctgtcactataccagtaccatgcagtttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggtactt
ttatccttgagaagagcttttgctatcctaggttttttgttattccagat
gaatttgcagattgctctttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggtgatctttccatct
tctgagatcttctttaatttcttttcttcagggacttgaagtttttatca
tacagatcttcacttccttagttagagtcacgcagatattttatattatt
tgtgactatgagaggtgttgtttccctaatttcttttctcagcctgttat
ctttgtgtagagaaagcattgacttgtttgagtatttatatcagctactc
acgagctgttttatcagtaggagtttctggtggattttaggtcacttata
taccatacatatcactcgcaaaggaatttggacttcctttgctattggat
tctgatctttgtgtgcatggctgctgaactcagacaagggaagagaggga
aatcgtc
gaattcatcccccttgaccactcattcattcagcaactcatctttgtgac
catcaagtgttcatgagcaagcatcatgtagaatgagtgatgcaggaaca
tacaatattctctatccatgagtgtttcttaagctaaatggaaaagtgag
cctcacaatgtactttaaaggacttccttgagaggaagtcttgttgctgc
agctgctgggacatttcatcacacagtcttcagctgtcattttctctaag
gactgtcttatagctgcagactgtagcctcaatcaaggtgtgccattttc
acagtactctactcaaagattgatggaggtgtcggtgtgatatattcctc
agtctggattactgtctatttcacctccatcagctccttgatactcccaa
agctgctagccctagtgctaattgccaaaaaattgtcctgatgagcaccc
acctccaccctacttctgcattataggggaacaccacacaagccattcca
aaatcatttactaaccttgcctgactagtgtatgaggaaatgaaggccaa
ggacatggacaaaaaaaaagtgccattccattgggagctgacagatgcat
gagagaactgagaagtggcagagcagatttgggatccaatggaagaataa
ggaattgggaagtaacaatgactttggccttagcccctaacagatttttc
ttcctcaagtcattttcagtaattttcagatctctgtgaaatcctgttga
aaaaagagaagccactctagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_162122640_162123410
seq2: B6Ng01-142B14.g_67_838

seq1  GAATTCATCCCCCTTGACCACTCATTCATTCAGCAACTCATCTTTGTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCCCCCTTGACCACTCATTCATTCAGCAACTCATCTTTGTGAC  50

seq1  CATCAAGTGTTCATGAGCAAGCATCATGTAGAATGAGTGATGCAGGAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGTGTTCATGAGCAAGCATCATGTAGAATGAGTGATGCAGGAACA  100

seq1  TACAATATTCTCTATCCATGAGTGTTTCTTAAGCTAAATGGAAAAGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATTCTCTATCCATGAGTGTTTCTTAAGCTAAATGGAAAAGTGAG  150

seq1  CCTCACAATGTACTTTAAAGGACTTCCTTGAGAGGAAGTCTTGTTGCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACAATGTACTTTAAAGGACTTCCTTGAGAGGAAGTCTTGTTGCTGC  200

seq1  AGCTGCTGGGACATTTCATCACACAGTCTTCAGCTGTCATTTTCTCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGGGACATTTCATCACACAGTCTTCAGCTGTCATTTTCTCTAAG  250

seq1  GACTGTCTTATAGCTGCAGACTGTAGCCTCAATCAAGGTGTGCCATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTCTTATAGCTGCAGACTGTAGCCTCAATCAAGGTGTGCCATTTTC  300

seq1  ACAGTACTCTACTCAAAGATTGATGGAGGTGTCGGTGTGATATATTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACTCTACTCAAAGATTGATGGAGGTGTCGGTGTGATATATTCCTC  350

seq1  AGTCTGGATTACTGTCTATTTCACCTCCATCAGCTCCTTGATACTCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGATTACTGTCTATTTCACCTCCATCAGCTCCTTGATACTCCCAA  400

seq1  AGCTGCTAGCCCTAGTGCTAATTGCCAAAAAATTGTCCTGATGAGCACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTAGCCCTAGTGCTAATTGCCAAAAAATTGTCCTGATGAGCACCC  450

seq1  ACCTCCACCCTACTTCTGCATTATAGGGGAACACCACACAAGCCATTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCACCCTACTTCTGCATTATAGGGGAACACCACACAAGCCATTCCA  500

seq1  AAATCATTTACTAACCTTGCCTGACTAGTGTATGAGGAAATGAAGGCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTTACTAACCTTGCCTGACTAGTGTATGAGGAAATGAAGGCCAA  550

seq1  GGACATGGACAAAAAAAAAGTGCCATTCCATTGGGAGCTGACAGATGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGGACAAAAAAAAAGTGCCATTCCATTGGGAGCTGACAGATGCAT  600

seq1  GAGAGAACTGAGAAGTGGCAGAGCAGATTTGGGATCCAATGGAAGAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAACTGAGAAGTGGCAGAGCAGATTTGGGATCCAATGGAAGAATAA  650

seq1  GGAATTGGGAAGTAACAATGACTTTGGCCTTAGCCCCTAACTGATTTTTC  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGAATTGGGAAGTAACAATGACTTTGGCCTTAGCCCCTAACAGATTTTTC  700

seq1  TACATCAAGTCATTTTCAGTAA-TTTCAGATCTCTGTGAAATCCTGTTGG  749
      | | |||||||||||||||||| |||||||||||||||||||||||||| 
seq2  TTCCTCAAGTCATTTTCAGTAATTTTCAGATCTCTGTGAAATCCTGTTGA  750

seq1  AAAAAGAGAAGCCACTCTAGAT  771
      ||||||||||||||||||||||
seq2  AAAAAGAGAAGCCACTCTAGAT  772