BAC Information

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BAC

Clone NameB6Ng01-142E03
Chromosome2 (Build37)
Map Location 89,514,187 - 89,515,375
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1193, Olfr1194-ps1, Olfr1195, Olfr1196, Olfr1197, Olfr1198, Olfr1199, Olfr1200, Olfr1201, Olfr1202, Olfr1203, Olfr1204, Olfr1206, Olfr1208, Olfr1209, Olfr1211, Olfr1212, Olfr1213, Olfr1214, Olfr1215, Olfr1216, Olfr1217, Olfr1218, Olfr1219, Olfr1220, Olfr1221, Olfr1222, Olfr1223, Olfr1224-ps1, Olfr1225, LOC435676, Olfr1226, LOC100042983, GA_x5J8B7TTH1T-1160-261, Olfr1227-ps1, Olfr1228, Olfr1229, Olfr1230, Olfr1231, Olfr1232, Olfr1233, Olfr1234, Olfr1235-ps1, GA_x5J8B7W62NC-668773-668438, Olfr1237-ps1, Olfr1238, Olfr1239, Olfr1240, Olfr1241, Olfr1242, Olfr1243, Olfr1244-ps1, Olfr1245, Olfr1246, Olfr1247, Olfr1248, Olfr1249, Olfr1541-ps1, Olfr1250, Olfr1251, GA_x5J8B7TT7VM-20-924
Downstream geneOlfr1252, GA_x5J8B7W62NC-992588-991951, Olfr1253-ps1, Olfr1254, Olfr1255, Olfr1256, Olfr48, Olfr1257, Olfr1258, Olfr1259, Olfr1260, Olfr1261, Olfr1262, Olfr1263, Olfr1264, Olfr1265, Olfr140, Olfr1266-ps1, Olfr1267-ps1, Olfr1268-ps1, Olfr1269, Olfr32, LOC100043090, Olfr1270, LOC627525, LOC100043096, Olfr1506, Olfr142, Olfr1271, Olfr1272, Olfr1273, LOC100042690, LOC100043113, LOC668629, GA_x5J8B7W2BV0-3116-4045, Ptprj, 4933423P22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142E03.bB6Ng01-142E03.g
ACCDH940498DH940499
length1,180865
definitionDH940498|Mus musculus domesticus DNA, BAC clone: B6Ng01-142E03, 5' end.DH940499|Mus musculus domesticus DNA, BAC clone: B6Ng01-142E03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttgacccactttgatttgaccttagtacaaggagataggaatg
gatcaagtcgcattcttctacataataaccgctagttgtgccagcaccat
ttgttgaaaatgctgtcttttttccactggatggttttagctcccttgtc
aaagatcaagtgaccataggtgtgtgggttcatttctgggtcttcaattc
tgttccattggtctacttgtctgtcgctataccagtaccattgaagttgt
tccctgcatgtaagaaaataataagcattgataactaagaaaattaccat
catttgtactttgtcttttaaaattaaatgatacatttctgaacaattca
tatagaaagcaaattgtcatgaagcctttaagcattttgagcaatgatga
aatcatatgatgccctatgaacaagtattttatgcataccaattcaaaga
atttaagttctaaaaactactgcaataagtatctttaataaatatttatt
ttagtataatgtcctccaggatcatccatgttctgacaaaaatgccaaaa
tattacattgaatatcatactttgtcaattaaaagtgcagtagtcattaa
tgtcctctttaactaattatttagtctcttttcaaaggttgaatactatt
cagatttatacactcaaatagatgcatatacacatgcacacacaaacaca
catatacattcaaacactcacatgtacacacatatctacaaatggaaaac
aggtagataataggcaattggtaaaacatttctcaatgattagggattag
taaatttttggtattgtgactatgaaataacatctttgtagatatataca
tacatacacataattctataagctcatgtccattgatctcttacatttaa
tgaattaatccttcttcaaaagaaacaagtccttatttaacaaacctgga
tcacagaataaccacatccattccacctgtctcatcttctcgattaaaaa
tagcaagtttgtttgtttgttttttgaaaaaataatagcatgtctcgtat
aataagctatttcactagaaaagcgaatactcataaaaataatttaaatg
gcagctaaataccgaactctggagataaactatgctatcatcctaactgc
tattaatgcacttggccacacttcatcttt
gaattcttcctttcctatttttatccatttgacctccttttgttgtctaa
ttgctctaactagaacttcaagtactatattgaatagattgggagacagt
gggcagtcatgtgtagttcctgattttaatgagattctttcatgtttctc
tttgttgttttgatgttggctactggtttactatatattgcttttactat
gtttacatatgggccttgaattcttgatctttttaagacttttaacatga
agggatgttgaattttgtcaaatgccttttcagcaactaatgaaatgatc
atgtggttgttttctttgagtttgtttttgtagtggattacattgatgga
tttccatatattaagccatccctgcatccttggaatgaaacctacttggt
tatagtgaatgacagtttttatgttattggatttggtttttgagaatttt
attttttttgcatcaatgttcatcagggaaattggtctgaagttctcttt
ctttgttgggtctttgtgtggtttaggtataagtgtaactatggcttcat
aaaatgtactgagtagtgttctttctatttctattttctggaagtttgaa
gagtatcggtattaggtcttctttgaatgtctgatagaattcttcactaa
actcatctggtcctaggctttttttggtttggaaacttgtaatgattgct
tctatttctttaggggatttgggactgtttagattgttttatctgatcct
gtttttaactttggcacctggtatctgtttaaaaagttgtccatttaatc
cagattttccaatttgattgagtataggctttctagtaggatctgatgat
ttttaaatttctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_89514187_89515375
seq2: B6Ng01-142E03.b_49_1228

seq1  GAATTCCTTGACCCACTTTGATTTGACCTTAGTACAAGGAGATAGGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGACCCACTTTGATTTGACCTTAGTACAAGGAGATAGGAATG  50

seq1  GATCAAGTCGCATTCTTCTACATAATAACCGCTAGTTGTGCCAGCACCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGTCGCATTCTTCTACATAATAACCGCTAGTTGTGCCAGCACCAT  100

seq1  TTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAAAATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTC  150

seq1  AAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTC  200

seq1  TGTTCCATTGGTCTACTTGTCTGTCGCTATACCAGTACCATTGAAGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCATTGGTCTACTTGTCTGTCGCTATACCAGTACCATTGAAGTTGT  250

seq1  TCCCTGCATGTAAGAAAATAATAAGCATTGATAACTAAGAAAATTACCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCATGTAAGAAAATAATAAGCATTGATAACTAAGAAAATTACCAT  300

seq1  CATTTGTACTTTGTCTTTTAAAATTAAATGATACATTTCTGAACAATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTACTTTGTCTTTTAAAATTAAATGATACATTTCTGAACAATTCA  350

seq1  TATAGAAAGCAAATTGTCATGAAGCCTTTAAGCATTTTGAGCAATGATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAAAGCAAATTGTCATGAAGCCTTTAAGCATTTTGAGCAATGATGA  400

seq1  AATCATATGATGCCCTATGAACAAGTATTTTATGCATACCAATTCAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATATGATGCCCTATGAACAAGTATTTTATGCATACCAATTCAAAGA  450

seq1  ATTTAAGTTCTAAAAACTACTGCAATAAGTATCTTTAATAAATATTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGTTCTAAAAACTACTGCAATAAGTATCTTTAATAAATATTTATT  500

seq1  TTAGTATAATGTCCTCCAGGATCATCCATGTTCTGACAAAAATGCCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTATAATGTCCTCCAGGATCATCCATGTTCTGACAAAAATGCCAAAA  550

seq1  TATTACATTGAATATCATACTTTGTCAATTAAAAGTGCAGTAGTCATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACATTGAATATCATACTTTGTCAATTAAAAGTGCAGTAGTCATTAA  600

seq1  TGTCCTCTTTAACTAATTATTTAGTCTCTTTTCAAAGGTTGAATACTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCTTTAACTAATTATTTAGTCTCTTTTCAAAGGTTGAATACTATT  650

seq1  CAGATTTATACACTCAAATAGATGCATATACACATGCACACACAAACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTATACACTCAAATAGATGCATATACACATGCACACACAAACACA  700

seq1  CATATACATTCAAACACTCACATGTACACACATATCTACAAATGGAAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACATTCAAACACTCACATGTACACACATATCTACAAATGGAAAAC  750

seq1  AGGTAGATAATAGGCAATTGGTAAAACATTTCTCAATGATTAGGGATTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGATAATAGGCAATTGGTAAAACATTTCTCAATGATTAGGGATTAG  800

seq1  TAAATTTTTGGTATTGTGACTATGAAATAACATCTTTGTAGATATATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTGGTATTGTGACTATGAAATAACATCTTTGTAGATATATACA  850

seq1  TACATACACATAATTCTATAAGCTCATGTCCATTGATCTCTTACATTTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACACATAATTCTATAAGCTCATGTCCATTGATCTCTTACATTTAA  900

seq1  TGAATTAATCCTTCTTCAAAAGAAACAAGTCCTTATTTAACAAACCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAATCCTTCTTCAAAAGAAACAAGTCCTTATTTAACAAACCTGGA  950

seq1  TCACAGAATAACCACATCCATTCCACCTGTCTCATCTTCTCGATT-AGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||| | ||
seq2  TCACAGAATAACCACATCCATTCCACCTGTCTCATCTTCTCGATTAAAAA  1000

seq1  TAGCAGGTTTGTTTGTTTGTTTTTTGAAAAGATAATAGCATGTCTCGTAT  1049
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  TAGCAAGTTTGTTTGTTTGTTTTTTGAAAAAATAATAGCATGTCTCGTAT  1050

seq1  AATAAGCTATTTCACTAGAAGAGCAGATTACTCAATAAATATTATTTTAA  1099
      |||||||||||||||||||| ||| || ||||| ||||| | || |||||
seq2  AATAAGCTATTTCACTAGAAAAGC-GAATACTC-ATAAA-AATAATTTAA  1097

seq1  ATGGCAGCTAAAATAACCAGAACTCTGGAGATAAAACTATTGCTATCATC  1149
      ||||||||| |||||  | ||||||||||||| |||||| ||||||||||
seq2  ATGGCAGCT-AAATA--CCGAACTCTGGAGAT-AAACTA-TGCTATCATC  1142

seq1  CCTTTAACTGCTTATTAATGCCATCTTGGCCACA----ATCTTT  1189
      |   ||||||| |||||||||   ||||||||||    ||||||
seq2  C---TAACTGC-TATTAATGC--ACTTGGCCACACTTCATCTTT  1180