BAC Information

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BAC

Clone NameB6Ng01-142H07
Chromosome2 (Build37)
Map Location 100,297,815 - 100,298,999
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621386, LOC668702, LOC100042907
Downstream geneLOC241572, LOC668705
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142H07.bB6Ng01-142H07.g
ACCDH940650DH940651
length1,163568
definitionDH940650|Mus musculus domesticus DNA, BAC clone: B6Ng01-142H07, 5' end.DH940651|Mus musculus domesticus DNA, BAC clone: B6Ng01-142H07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagaacttggaagaaaactctaagaaaacaagacaagaacttt
gtaacctcaatttttcccaaacacagaatagttcattgaatgttttttat
gctccttccaagtgtcatggataggagtgagtttactgtggctgtggtta
cccatacgcttctatagcaaaatattttcctatcacacatacattgattt
tttatcttaaaaccttacttatgagattcttcttaatcctcagagtataa
attgtctgcagctctgattaagttggctactgctgttgtctgcctcattt
acagcccccattctcccaggtgccactgattctagaataaataagaaaca
atactcaagaatgaaaatcatggtttgttgctggtgtatacttgaaggca
tttcattaaacacttaagctgctaagcaaataaattgcagattaattttg
ctattatacgtgtgtgtgtgttatttgatatgtatttatgggcaaatttc
tgattgtaattattcccaatatgagaatatgctaaagctgaaatatccta
aatatatatgaataaatgaatggataagaaatttgtaccacactaatgaa
tgaactttcatcatcaaataaagttatgaggtaccaatgactacttccac
atgactgggctcatgagtgaaagaactcagagagaatacccccatacaac
atagttccatgtctatgaaatgtcttaaactggctaaagccttagaatag
actgactgttgtaaggtagtggtacagttacgaactatgtgactaggtgt
aaggaattaatttgagtggcaaaagtcatgattattagttacctacctca
gtgattgttgcacaacattgtcatttaaaatatttaaatgattattgtct
ctgtgtgtggaatggggattctcataatagagcattcatgtgaatctcag
agacaacttgaagtgtcatactcctcatcaacacgtgtgcctgaggatta
aattcagattctcagccttggaggcagcagctatggaccacatattttat
atttatgaaaaaaagaatattatttaagagtatcatggaatttgtatgtg
gtcagtcaatgcaatgaaggatttcacggctactatctccatgagggtat
gtcttcgctgcca

ttctccatatagatgaggaaacttacatagtcatgggacgtatagagaga
ggaaactgagtaggagaggaatggggatgatgatcatgtgtggggatggg
taaaggttgagggcttgagttagaatagaaatcaatggaggcatctctga
gactaactataggcctggaatggggcaggatatgaggagtttatagggat
aagcctagctcagatttctacaagagggggaaatagagactgaagtggcc
acctcctatatccagacaggacttctagaggagagaggggatattaatct
acctacaaaaaccttcaacctaaaatgtgtctcacctataatatgtgaag
ggataaaggtggagtagagactgagagcacagtcaaccaatggctggccc
aaattgagatccatcccacacgagaaagccaacccctcacactattaatg
agattttactatgcttacagacagaaacctagcataactgtctcctgtga
tgcttcatccagcaccaagatggaggcagatgcagacacccacacccaaa
atcaggtggagctcagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_100297815_100298999
seq2: B6Ng01-142H07.b_46_1208 (reverse)

seq1  TGGCAGCGAAGAACCATCCCCACAAAGGAAAGATAGGATAAACACCGTGA  50
      ||||||||||||  ||| ||| ||  |   |||||| |      ||||| 
seq2  TGGCAGCGAAGA--CATACCCTCATGG---AGATAGTA-----GCCGTG-  39

seq1  AAATCCTTCATGTGCACTGACTGAACCACATACAAATGTCAATGATACCT  100
      ||||||||||| |||| |||||| ||||||||||||| || |||||| ||
seq2  AAATCCTTCAT-TGCATTGACTG-ACCACATACAAAT-TCCATGATA-CT  85

seq1  CTTAAATAATTATTCTGTATTTTCATAAATTATAAATATGTGGTCCATTA  150
      ||||||||| |||||| | |||||||||||   |||||||||||||| ||
seq2  CTTAAATAA-TATTCT-TTTTTTCATAAATATAAAATATGTGGTCCA-TA  132

seq1  GCTGCTGCCTCCAAGGCTGAGAATCTGAATTTAATCCTCAGGCACACGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTGCTGCCTCCAAGGCTGAGAATCTGAATTTAATCCTCAGGCACACGT-  181

seq1  GTTGATGGAGGAGTATGACACCTTCAAGTTGTTCTCTGAGATTCACATGA  250
      |||||| ||||||||||||| |||||||||| ||||||||||||||||||
seq2  GTTGAT-GAGGAGTATGACA-CTTCAAGTTG-TCTCTGAGATTCACATGA  228

seq1  ATGCTCTATTATGAGAATCCCCATTCCACACACAGAGACAATAATCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTATTATGAGAATCCCCATTCCACACACAGAGACAATAATCATTT  278

seq1  AAATATTTTAAATGACAATGTTGTGCAACAATCACTGAGGTAGGTAACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTAAATGACAATGTTGTGCAACAATCACTGAGGTAGGTAACTA  328

seq1  ATAATCATGACTTTTGCCACTCAAATTAATTCCTTACACCTAGTCACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCATGACTTTTGCCACTCAAATTAATTCCTTACACCTAGTCACATA  378

seq1  GTTCGTAACTGTACCACTACCTTACAACAGTCAGTCTATTCTAAGGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGTAACTGTACCACTACCTTACAACAGTCAGTCTATTCTAAGGCTTT  428

seq1  AGCCAGTTTAAGACATTTCATAGACATGGAACTATGTTGTATGGGGGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTTTAAGACATTTCATAGACATGGAACTATGTTGTATGGGGGTAT  478

seq1  TCTCTCTGAGTTCTTTCACTCATGAGCCCAGTCATGTGGAAGTAGTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGAGTTCTTTCACTCATGAGCCCAGTCATGTGGAAGTAGTCATT  528

seq1  GGTACCTCATAACTTTATTTGATGATGAAAGTTCATTCATTAGTGTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTCATAACTTTATTTGATGATGAAAGTTCATTCATTAGTGTGGTA  578

seq1  CAAATTTCTTATCCATTCATTTATTCATATATATTTAGGATATTTCAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTCTTATCCATTCATTTATTCATATATATTTAGGATATTTCAGCT  628

seq1  TTAGCATATTCTCATATTGGGAATAATTACAATCAGAAATTTGCCCATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATATTCTCATATTGGGAATAATTACAATCAGAAATTTGCCCATAA  678

seq1  ATACATATCAAATAACACACACACACGTATAATAGCAAAATTAATCTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATCAAATAACACACACACACGTATAATAGCAAAATTAATCTGCA  728

seq1  ATTTATTTGCTTAGCAGCTTAAGTGTTTAATGAAATGCCTTCAAGTATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTGCTTAGCAGCTTAAGTGTTTAATGAAATGCCTTCAAGTATAC  778

seq1  ACCAGCAACAAACCATGATTTTCATTCTTGAGTATTGTTTCTTATTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAACAAACCATGATTTTCATTCTTGAGTATTGTTTCTTATTTATT  828

seq1  CTAGAATCAGTGGCACCTGGGAGAATGGGGGCTGTAAATGAGGCAGACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATCAGTGGCACCTGGGAGAATGGGGGCTGTAAATGAGGCAGACAA  878

seq1  CAGCAGTAGCCAACTTAATCAGAGCTGCAGACAATTTATACTCTGAGGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTAGCCAACTTAATCAGAGCTGCAGACAATTTATACTCTGAGGAT  928

seq1  TAAGAAGAATCTCATAAGTAAGGTTTTAAGATAAAAAATCAATGTATGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGAATCTCATAAGTAAGGTTTTAAGATAAAAAATCAATGTATGTG  978

seq1  TGATAGGAAAATATTTTGCTATAGAAGCGTATGGGTAACCACAGCCACAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGAAAATATTTTGCTATAGAAGCGTATGGGTAACCACAGCCACAG  1028

seq1  TAAACTCACTCCTATCCATGACACTTGGAAGGAGCATAAAAAACATTCAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCACTCCTATCCATGACACTTGGAAGGAGCATAAAAAACATTCAA  1078

seq1  TGAACTATTCTGTGTTTGGGAAAAATTGAGGTTACAAAGTTCTTGTCTTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTATTCTGTGTTTGGGAAAAATTGAGGTTACAAAGTTCTTGTCTTG  1128

seq1  TTTTCTTAGAGTTTTCTTCCAAGTTCTCAGAATTC  1185
      |||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAGAGTTTTCTTCCAAGTTCTCAGAATTC  1163


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