BAC Information

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BAC

Clone NameB6Ng01-142I16
Chromosome2 (Build37)
Map Location 111,048,002 - 111,049,114
singlet/doubletsinglet
Overlap gene4930430A15Rik
Upstream geneLOC668797, Bbox1, 1110018M03Rik, LOC668799, Slc5a12, Muc15, LOC668802, LOC623270, LOC623301
Downstream geneOlfr1275, Olfr1276, Olfr1277, Olfr1278, Olfr1279, Olfr1280, Olfr1281, Olfr1282, Olfr1283, Olfr1284, LOC100043465, Olfr1285, Olfr1286, Olfr1287, Olfr1288, Olfr1289, Olfr1290, GA_x5J8B7W4T2P-95628-96096, Olfr1292-ps1, Olfr1293, Olfr1294, Olfr1295, LOC668822, Olfr1297, Olfr1298, Olfr1299, Olfr1300-ps1, Olfr1301, Olfr1302, Olfr1303, Olfr249-ps1, LOC668825, Olfr1305, Olfr1306, LOC668827, Olfr1307, Olfr1308, Olfr1309, LOC433463, Olfr1310, Olfr1311, Olfr1312, Olfr1313, Olfr1314, Olfr1315-ps1, Olfr1316, Olfr1317, Olfr1318, GA_x5J8B7W3P0G-705890-705633
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142I16.bB6Ng01-142I16.g
ACCDH940715DH940716
length1,0801,157
definitionDH940715|Mus musculus domesticus DNA, BAC clone: B6Ng01-142I16, 5' end.DH940716|Mus musculus domesticus DNA, BAC clone: B6Ng01-142I16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatctaccctcacccagtactgggcttactagcatgaagcatga
cattcgggtttttatataggatatgtattcaatttcatctccccgtgttt
ccataaaaacactttgctgactgagctctgaactcagcactgttagtttt
ctttctctgaacctttctctcccatagtatcctatgttgaggtaactaat
tttgaatttccagtgtactctgtttctagtatataccagactcatcagtt
gttaattttcttgtaggaaatacaaagatcatatttgaggccttgaaatt
caaacacaaagcaaatttatgtaagtcaatgaataactatatatgtaaaa
atcataattagaaagaaagcgataaaaatgaaaaataagatactaaaaac
aactgagcatgtgaatttatatttatagccttgaatattcattcccaaaa
ataatacacattttataggaattcaaatctgacaaattaagaaaagtagt
ggaaacatagtttttaattttgtattttatgatttctttctacagacctc
atagattcagagctgtaaccaaattagaatataaattagagtgcaaataa
gctgcagataatcatgaatgtggtccaacttgatttcatgggtatgttct
atcttcactgcagaagaaactaccctataaatgggactaaaggaaaactc
tgctctctcagaaacacttgctccaggccctaccatagctgaggacatgg
gtagatagctctgccattgccattccaagtcaacacaggaaatcttaaga
aatattgggattcacaacaagacattttaggtgcagacataaaaggaccc
acaggtggcttaaatttagaattttaaacacctgctcatttcttcatttc
gttctgtctacatgtagctttcacctttctcctctctcagtgctctctaa
catctactgtgaaatactcacaggacactcatacacctagtactacccat
gaaatatttctttactctatacaaaagaaggtctaagcattaatatactg
tgtgaatcagaaacatacgtggatatttta
gaattctcacctgaggaataccgaatggcatagaagcacctgaaaaaatg
gtcagcatccttaatctttagagaaatgcaaatcaaaacaacccctagat
tccatctcaaaccagtcagaatggctaagataaaaaattcaggtgacagc
agttgctggcgaggatgtggagaaagaggaatactccattgttggtggga
ttgcaagcttgtacaaccactctggaaatcagtctggcctttcctcagaa
aattggacatagtactaatggaggatcccgcaatacctctccttgggcat
atatccagaagatgttccaactggtaagaaggacacatgctccactatgt
tcatagaagccttatttataataaccagaagctggagagaacccagatgc
ccctcaacagaggaatggatacaaaaaaatatggtacatttacacatgga
gtacttctcagctcttaaaagaaatgaatttatgaaattcctaggcaaat
ggttggacctggagggcaacatcctgagtgaggtaacccaatcacaaaag
aactcaaatgatatatactcactgataagtgtttattagctcagaaactt
agtataccagagatgtaagatacaatttgcaaaacacatgaaaatgaaga
agaacaaagaccaaagtgtggacaatttgccccctcttagaattgggaac
aatcacctatggaaggagttacagagacaaagtttggagctgagacaaag
gatggaccatctagagactgccatatccagtgatccatcccataattagc
ctccaaacgatgacaccattgcatacactagcaagagtttgctgaaagaa
ccctgaaatagctgtctctgtaagactaggcctgggcctagcaaacacat
aagtggatgctcacagtcagctatgatggatacagggccccatggaggag
ctagagaaagtattcagagctatagatatctgcaacctgtagtgttaaga
acatatgactacttgtacccagagctctgactctagctgcatattgtatc
aaaagatgcctagctgccatcacttgaaagaagtccaatggatgtattta
ttgctcagatcagagaaactcagagtctaaaatggaatgggtggataggg
atagtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_111048002_111049114
seq2: B6Ng01-142I16.b_45_1124

seq1  GAATTCTATCTACCCTCACCCAGTACTGGGCTTACTAGCATGAAGCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTACCCTCACCCAGTACTGGGCTTACTAGCATGAAGCATGA  50

seq1  CATTCGGGTTTTTATATAGGATATGTATTCAATTTCATCTCCCCGTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGGGTTTTTATATAGGATATGTATTCAATTTCATCTCCCCGTGTTT  100

seq1  CCATAAAAACACTTTGCTGACTGAGCTCTGAACTCAGCACTGTTAGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAAACACTTTGCTGACTGAGCTCTGAACTCAGCACTGTTAGTTTT  150

seq1  CTTTCTCTGAACCTTTCTCTCCCATAGTATCCTATGTTGAGGTAACTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTGAACCTTTCTCTCCCATAGTATCCTATGTTGAGGTAACTAAT  200

seq1  TTTGAATTTCCAGTGTACTCTGTTTCTAGTATATACCAGACTCATCAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATTTCCAGTGTACTCTGTTTCTAGTATATACCAGACTCATCAGTT  250

seq1  GTTAATTTTCTTGTAGGAAATACAAAGATCATATTTGAGGCCTTGAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTTCTTGTAGGAAATACAAAGATCATATTTGAGGCCTTGAAATT  300

seq1  CAAACACAAAGCAAATTTATGTAAGTCAATGAATAACTATATATGTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACAAAGCAAATTTATGTAAGTCAATGAATAACTATATATGTAAAA  350

seq1  ATCATAATTAGAAAGAAAGCGATAAAAATGAAAAATAAGATACTAAAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATTAGAAAGAAAGCGATAAAAATGAAAAATAAGATACTAAAAAC  400

seq1  AACTGAGCATGTGAATTTATATTTATAGCCTTGAATATTCATTCCCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGCATGTGAATTTATATTTATAGCCTTGAATATTCATTCCCAAAA  450

seq1  ATAATACACATTTTATAGGAATTCAAATCTGACAAATTAAGAAAAGTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATACACATTTTATAGGAATTCAAATCTGACAAATTAAGAAAAGTAGT  500

seq1  GGAAACATAGTTTTTAATTTTGTATTTTATGATTTCTTTCTACAGACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATAGTTTTTAATTTTGTATTTTATGATTTCTTTCTACAGACCTC  550

seq1  ATAGATTCAGAGCTGTAACCAAATTAGAATATAAATTAGAGTGCAAATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTCAGAGCTGTAACCAAATTAGAATATAAATTAGAGTGCAAATAA  600

seq1  GCTGCAGATAATCATGAATGTGGTCCAACTTGATTTCATGGGTATGTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGATAATCATGAATGTGGTCCAACTTGATTTCATGGGTATGTTCT  650

seq1  ATCTTCACTGCAGAAGAAACTACCCTATAAATGGGACTAAAGGAAAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCACTGCAGAAGAAACTACCCTATAAATGGGACTAAAGGAAAACTC  700

seq1  TGCTCTCTCAGAAACACTTGCTCCAGGCCCTACCATAGCTGAGGACATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTCAGAAACACTTGCTCCAGGCCCTACCATAGCTGAGGACATGG  750

seq1  GTAGATAGCTCTGCCATTGCCATTCCAAGTCAACACAGGAAATCTTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATAGCTCTGCCATTGCCATTCCAAGTCAACACAGGAAATCTTAAGA  800

seq1  AATATTGGGATTCACAACAAGACATTTTAGGGTGCAGACATAAAAGGACC  850
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AATATTGGGATTCACAACAAGACATTTTA-GGTGCAGACATAAAAGGACC  849

seq1  CACAGGTGGCTTAAAATTTAGAATTTTAAACACCTGCTCATTTCCTTCAT  900
      |||||||||||| |||||||||||||||||||||||||||||| ||||| 
seq2  CACAGGTGGCTT-AAATTTAGAATTTTAAACACCTGCTCATTT-CTTCA-  896

seq1  TTTCGTTCTGTTCTACATGTAGCTTTTCACCTTTCTCCTCCTCTTCAGTG  950
      |||||||||| |||||||||||| ||||||||||||||| ||| ||||||
seq2  TTTCGTTCTG-TCTACATGTAGC-TTTCACCTTTCTCCT-CTC-TCAGTG  942

seq1  CTCTCCTAACATTCCTTAACTGTGAAAATACTCACAGGACACTCATACAC  1000
      |||| |||||||  ||  |||||| |||||||||||||||||||||||||
seq2  CTCT-CTAACAT--CT--ACTGTG-AAATACTCACAGGACACTCATACAC  986

seq1  CTAGTACTAACCACAATTGAAAATATTTTCTTTTAACTTCCTATAACAAA  1050
      ||||||||| |||    || ||||| |||||||  |||  |||||   ||
seq2  CTAGTACTACCCA----TG-AAATA-TTTCTTT--ACT--CTATA--CAA  1024

seq1  AAGAAAGTCCTACAGCCATTTAATATACTGTGTGATTCAAGAAACATTAC  1100
      ||||| || ||| |||   |||||||||||||||| || ||||||| |||
seq2  AAGAAGGT-CTA-AGC--ATTAATATACTGTGTGAATC-AGAAACA-TAC  1068

seq1  GTGGATAATTTTA  1113
      |||||| ||||||
seq2  GTGGAT-ATTTTA  1080