BAC Information

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BAC

Clone NameB6Ng01-142J02
Chromosome2 (Build37)
Map Location 42,796,326 - 42,796,848
singlet/doubletsinglet
Overlap genenone
Upstream geneLrp1b, LOC625094
Downstream geneLOC100041228, LOC100041245, Kynu, Arhgap15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142J02.bB6Ng01-142J02.g
ACCDH940731DH940732
length5171,206
definitionDH940731|Mus musculus domesticus DNA, BAC clone: B6Ng01-142J02, 5' end.DH940732|Mus musculus domesticus DNA, BAC clone: B6Ng01-142J02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
taccagacattcacagaagacctaatcctcaaattatcacacaaactatc
aatagaagaaacattgccaaagtcattgtatgggaccacagctaccatga
tacccaaatcacacaaataatcaacaagaaagaaaattaattaaaatctt
attttgtttcttataagatttataccccctgttaggcatcattcatttta
atacatgaattaaactcatttattttattagcatttgctagtgtctttat
gtttaattagtatggaaagatgttgttgtggtatttttctacatatgtat
tttgtaaaccttcttcctctactctatagaccttgtacacatttcctcag
tcttcttcatgtttttgttatgtttcttctgttacctttctgtacccatt
acttaaaagttctgttttcctctcatcccctttctatattagagggctat
actcataggtgtttgtgtgtgtgtgtgtatgtgtgtgtgtgtttgaaagt
gagaggggggagaggta
gaattcaattaagtcctggtctttctcagcatacagacactagttaacaa
atgatgaacttagatttaaaggacaatttagaaatggtcataattttgga
caggggggaaattaaatagaggatttagacttgggaatttctatcttttc
tttcatcttatctatcttttctttcttaggtaaatggaaggggactgaaa
agaaaaaagaagcatagagtaatattatgagaaattagatatatgggaat
ggattactcaatttaaacaaaacattttgtagccataatcatacattggt
agaaatctttatattttgatacagaattgaagttacattttcttacattg
gtacagaatttataaattaatacaggtataagattttcattgacatcaat
ttgtgtatattgctataaaattttaaataaattttgttacttttagatag
gcattgtgcctatgcaacttatttaagaatataaggcttagacccagtac
ttttaatagatgctattacaaactgttcaggatgcttaagtaatgtgact
taaagataaactcatggtaatattagattctgattaaacccatatatccc
tcaacagaggaatggatacagaaatttactcacctattaaaaacaatgaa
tttctgaaattcttaggacagtgaatggaactagaacatatcatctgagt
gaggaaacacaatcataaaagaacaaacatggtatgcactcactgataag
tggatattagccaagaagctcggaatacccaagatacaattcacagacca
catgaagctcaagaagaaggaagaccaaagtgtggatacctcggtctttc
tttggaagagggaacaaaacgcctgtgggaggagatgcagagtcaaagta
cggagcaggactgaatgaacggcatccagagcctgtctacctgggatcca
tcccacctagagtcaccaaacccagacactatgtgatgcaacagtgctgc
tgaaagaaggcttgatataacagtctctgaaagactctgcagtgctgaca
atacaattgaccctctcagtcagcaatggaactggcatgatcctcatgaa
gggcaaagaccagaatctggaatgtggcagctcctaagcgatacactact
tgacatccataccactcgagcgtctccaggaacctatgtctccactcagg
agatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_42796326_42796848
seq2: B6Ng01-142J02.b_47_569 (reverse)

seq1  TACCTCTCCCCCCTCTCTCTCATAAACACACACACACATACACACACACA  50
      ||||||||||||||||| ||   |||||||||||||||||||||||||||
seq2  TACCTCTCCCCCCTCTCACTTTCAAACACACACACACATACACACACACA  50

seq1  CACAAACACCTATGAGTATAGCCCTCTAATATAGAAAGGGGATGAGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAACACCTATGAGTATAGCCCTCTAATATAGAAAGGGGATGAGAGGA  100

seq1  AAACAGAACTTTTAAGTAATGGGTACAGAAAGGTAACAGAAGAAACATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAACTTTTAAGTAATGGGTACAGAAAGGTAACAGAAGAAACATAA  150

seq1  CAAAAACATGAAGAAGACTGAGGAAATGTGTACAAGGTCTATAGAGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACATGAAGAAGACTGAGGAAATGTGTACAAGGTCTATAGAGTAGA  200

seq1  GGAAGAAGGTTTACAAAATACATATGTAGAAAAATACCACAACAACATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGGTTTACAAAATACATATGTAGAAAAATACCACAACAACATCT  250

seq1  TTCCATACTAATTAAACATAAAGACACTAGCAAATGCTAATAAAATAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACTAATTAAACATAAAGACACTAGCAAATGCTAATAAAATAAAT  300

seq1  GAGTTTAATTCATGTATTAAAATGAATGATGCCTAACAGGGGGTATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAATTCATGTATTAAAATGAATGATGCCTAACAGGGGGTATAAAT  350

seq1  CTTATAAGAAACAAAATAAGATTTTAATTAATTTTCTTTCTTGTTGATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAGAAACAAAATAAGATTTTAATTAATTTTCTTTCTTGTTGATTA  400

seq1  TTTGTGTGATTTGGGTATCATGGTAGCTGTGGTCCCATACAATGACTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTGATTTGGGTATCATGGTAGCTGTGGTCCCATACAATGACTTTG  450

seq1  GCAATGTTTCTTCTATTGATAGTTTGTGTGATAATTTGAGGATTAGGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGTTTCTTCTATTGATAGTTTGTGTGATAATTTGAGGATTAGGTCT  500

seq1  TCTGTGAATGTCTGGTAGAATTC  523
      |||||||||||||||||||||||
seq2  TCTGTGAATGTCTGGTAGAATTC  523