BAC Information

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BAC

Clone NameB6Ng01-142J10
Chromosome2 (Build37)
Map Location 85,376,715 - 85,377,593
singlet/doubletsinglet
Overlap genenone
Upstream geneCtnnd1, 2700094K13Rik, Txndc14, Med19, Zdhhc5, Clp1, Ypel4, Serping1, Ube2l6, Smtnl1, Timm10, Slc43a1, Rtn4rl2, Slc43a3, Prg2, Prg3, P2rx3, Ssrp1, Tnks1bp1, Agtrl1, LOC625033, Lrrc55, Olfr987, GA_x5J8B7W531T-1241080-1240524, Olfr988, GA_x5J8B7W531T-1286425-1285652, Olfr990-ps1, Olfr991-ps1, Olfr992, Olfr993, Olfr994, Olfr995, 4833423E24Rik
Downstream geneOlfr996, Olfr997-ps1, Olfr998, Olfr999-ps1, Olfr1000, Olfr1001-ps1, Olfr1002, GA_x5J8B7W531T-1558688-1559570, Olfr1004-ps1, Olfr154, GA_x5J8B7W531T-1577060-1577325, Olfr1006, GA_x5J8B7W531T-1588603-1588734, Olfr1008, Olfr1009, Olfr1010, Olfr1012, Olfr1013, Olfr1014, Olfr1015, Olfr1016, GA_x5J8B7W3KVV-518538-519236, Olfr1018, Olfr1019, Olfr1020, Olfr1021-ps1, Olfr1022, Olfr1023, Olfr1024, Olfr1025-ps1, Olfr1026, Olfr1027-ps1, Olfr1028, Olfr1029, Olfr1030, Olfr1031, Olfr1032, LOC100042075, Olfr1033, Olfr1034, Olfr1533-ps1, Olfr1035-ps1, Olfr1036, Olfr1037, LOC100041372, Olfr1038, Olfr1039, Olfr1040, GA_x5J8B7W3KVV-170014-170572, Olfr1042, Olfr1043, Olfr1044, Olfr52, Olfr1045, Olfr1046, Olfr1047, Olfr1048, Olfr1049, Olfr1050-ps1, Olfr1051, GA_x5J8B7W3KVV-25848-25992, Olfr1052, Olfr1053-ps1, Olfr1054, Olfr1055, Olfr1056, Olfr1057, GA_x5J8B7TRQ4E-1174-939, Olfr1058, Olfr1059-ps1, Olfr1515, Olfr1062, Olfr1063-ps1, Olfr1064-ps1, Olfr1065, Olfr1066, Olfr1069-ps1, Olfr1070-ps1, Olfr228, Olfr1073-ps1, Olfr1075-ps1, GA_x5J8B7W4CQV-104617-103730, Olfr1076, LOC625853, Olfr1078-ps1, GA_x5J8B7W4CQV-78329-78805
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142J10.bB6Ng01-142J10.g
ACCDH940747DH940748
length8791,147
definitionDH940747|Mus musculus domesticus DNA, BAC clone: B6Ng01-142J10, 5' end.DH940748|Mus musculus domesticus DNA, BAC clone: B6Ng01-142J10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcttttagattgcaggtctgggtgaagtcaatgagatacaggg
gaggtcaatgagatacaggggaggtcaatgagatacaggggaggtcattc
ttgatccttcctggtaagactagagcagtctctgttcttattgctcctga
gcatggtgatattatgcacccccttcatttgcatctttgttgcatattag
aattagaatatgaattgtgagagggcaagggccatgccctctttgcttct
gcatttctcaaactgatgttaagtaactctcaggacttgattacagaagg
atggaagttagtagccaagatctggaatacccagtcctcctctgacaaaa
agggtcctgaatgaaagagtgtaaaaatgttacaaaccctcagccccctc
tcatccttcacaccagagtaatgccacatctccttccagactcctctctg
attattcagttcctttcctaattagcgctctccttaagtctgtcattcca
aatgtgcttgtctccccccttctggaaaggatatttacacgttcctcccc
tttatatgtgatctttagatctgataataattgcagagtctacaaaaatt
cttaaagaggagaaaggcttaataaatctttaatgcaattatatagactc
aaatacaattgtatgctcatgcatatgtggggatgttttttttgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgcatttctgagaggccactcatgtg
tgggaaccagatgttaacataaggtgtcttcttcagtgtttctccatttt
atgtttgagacagggttctttctttgaacttgaagcttgccttgaccact
agatggagcttggtgcaagacttcctagt
gaattctcacctgaggaatactgaatagctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaatcctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggaaaggatgtggagaaagagaaacactcctccattgttggtg
gggttgcaagcttgtacaatcactctggaaatcagtctggcagttcctca
gaaaattggacatggtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagatgtttcaactagtaagaaagaaacatgctccactat
gttcatagcagccttatttacaatagccaggagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaaaaaaaatgtggtacatttac
acaatggagtactactcagctattaaaaagaatgaatttatgaaattcct
aggcaaatggttggacctggagggcattatcatgagtgaggtaacccaat
cacaaaataactcaaatgatatgtactcactgataagtgattattagccc
agaaactagaatacccaatacataagttacaatttgcaaaacacatgaaa
ctcaagaagaacgaagaccaaagtgtggacactttgccccttctttaaat
tgggaacaaaacacccatggcaggagttacagagaccaagtttggagctg
agactaaaggatgaaccatcgagagactgccatatccaaggatccatcct
ataatcagcctccaaacgctgacaccattgcatacactagcaagattttg
ctgaaaggaccctgatatagctgtctcttgtgagactaggctggggccta
gcaaacacataagtggatgctcacagtcagctatgggatggatcacaggg
ccccaatgagagctagagaaagtacccaagagctaaagagatctgcaccc
tgtagtgacacatctgactagcagtatcccgagctctgactctagctgcc
atatgtatcaaagatgcctagtcgcattctgagaaattcatggactgcaa
ctttaatgccagtacatggtacgcagcaaacgtggaatgtgggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_85376715_85377593
seq2: B6Ng01-142J10.b_43_921

seq1  GAATTCAGCTTTTAGATTGCAGGTCTGGGTGAAGTCAATGAGATACAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTTTAGATTGCAGGTCTGGGTGAAGTCAATGAGATACAGGG  50

seq1  GAGGTCAATGAGATACAGGGGAGGTCAATGAGATACAGGGGAGGTCATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAATGAGATACAGGGGAGGTCAATGAGATACAGGGGAGGTCATTC  100

seq1  TTGATCCTTCCTGGTAAGACTAGAGCAGTCTCTGTTCTTATTGCTCCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCTTCCTGGTAAGACTAGAGCAGTCTCTGTTCTTATTGCTCCTGA  150

seq1  GCATGGTGATATTATGCACCCCCTTCATTTGCATCTTTGTTGCATATTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGATATTATGCACCCCCTTCATTTGCATCTTTGTTGCATATTAG  200

seq1  AATTAGAATATGAATTGTGAGAGGGCAAGGGCCATGCCCTCTTTGCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAATATGAATTGTGAGAGGGCAAGGGCCATGCCCTCTTTGCTTCT  250

seq1  GCATTTCTCAAACTGATGTTAAGTAACTCTCAGGACTTGATTACAGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCTCAAACTGATGTTAAGTAACTCTCAGGACTTGATTACAGAAGG  300

seq1  ATGGAAGTTAGTAGCCAAGATCTGGAATACCCAGTCCTCCTCTGACAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGTTAGTAGCCAAGATCTGGAATACCCAGTCCTCCTCTGACAAAA  350

seq1  AGGGTCCTGAATGAAAGAGTGTAAAAATGTTACAAACCCTCAGCCCCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCCTGAATGAAAGAGTGTAAAAATGTTACAAACCCTCAGCCCCCTC  400

seq1  TCATCCTTCACACCAGAGTAATGCCACATCTCCTTCCAGACTCCTCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTCACACCAGAGTAATGCCACATCTCCTTCCAGACTCCTCTCTG  450

seq1  ATTATTCAGTTCCTTTCCTAATTAGCGCTCTCCTTAAGTCTGTCATTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAGTTCCTTTCCTAATTAGCGCTCTCCTTAAGTCTGTCATTCCA  500

seq1  AATGTGCTTGTCTCCCCCCTTCTGGAAAGGATATTTACACGTTCCTCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTTGTCTCCCCCCTTCTGGAAAGGATATTTACACGTTCCTCCCC  550

seq1  TTTATATGTGATCTTTAGATCTGATAATAATTGCAGAGTCTACAAAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGTGATCTTTAGATCTGATAATAATTGCAGAGTCTACAAAAATT  600

seq1  CTTAAAGAGGAGAAAGGCTTAATAAATCTTTAATGCAATTATATAGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAGAGGAGAAAGGCTTAATAAATCTTTAATGCAATTATATAGACTC  650

seq1  AAATACAATTGTATGCTCATGCATATGTGGGGATGTTTTTTTTGTGTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAATTGTATGCTCATGCATATGTGGGGATGTTTTTTTTGTGTGTG  700

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTACATTTCTGTGAGGCCACTCATGTG  750
      ||||||||||||||||||||||||| |||||||| |||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGCATTTCTGAGAGGCCACTCATGTG  750

seq1  TGGAAACCAGATGTTAACATCAAGGTGTCTTCTTCAGTTGTTCTCCATTT  800
      ||| |||||||||||||||| |||||||||||||||||  ||||||||||
seq2  TGGGAACCAGATGTTAACAT-AAGGTGTCTTCTTCAGTGTTTCTCCATTT  799

seq1  TATGTTTTGAGACAGGG-TCTTTCGTTGAACTTGAAGCTTGCCATGACAA  849
      |||| |||||||||||| |||||| |||||||||||||||||| |||| |
seq2  TATG-TTTGAGACAGGGTTCTTTCTTTGAACTTGAAGCTTGCCTTGACCA  848

seq1  CTAGATGG-GCTTGGTGCTAGGCCTCCTAGT  879
      |||||||| ||||||||| || | |||||||
seq2  CTAGATGGAGCTTGGTGCAAGACTTCCTAGT  879