BAC Information

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BAC

Clone NameB6Ng01-143A15
Chromosome2 (Build37)
Map Location 60,438,330 - 60,554,289
singlet/doubletdoublet
Overlap geneItgb6
Upstream geneLOC100039016, Tanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1
Downstream geneRbms1, ENSMUSG00000075325, Tank, Psmd14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143A15.bB6Ng01-143A15.g
ACCDH941083DH941084
length884653
definitionDH941083|Mus musculus domesticus DNA, BAC clone: B6Ng01-143A15, 5' end.DH941084|Mus musculus domesticus DNA, BAC clone: B6Ng01-143A15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,438,330 - 60,439,212)(60,553,637 - 60,554,289)
sequence
gaattcatctctttgcttgggatattcttttcttgattgtttccaatcag
cgaacaatgtctcaccttcatgccctgaatgactggttgttgaatgacct
gttattatcttaagtcgacctccttttgaagcgacaaagcatgataaacc
atacagtgcagtaaacctttaacgcaagcggagttgactttctctggccg
aaggaggtctgtctacccatctgaggaaaggcctgctttgtgcttctccc
tgtgcttgtaggtcacgttcttaaaagtgctggtggaacctcggtacaga
ggattggttccctaaagaacagtagggggaaaaaacggttcaaagaaaag
atgcattttgttagtacaccatttccacatcttcaaatatttgtgttata
gttcaaatgggagagcaaagctctatcttggaagctatttgaatttattt
tgataaattttaaattttatccacctttatctcatttatgttgttatttc
atgttatatgcgtatgcacatctctgaaattattatttttaattttatta
caccaatttgtgtagcagaagggcacttgtgtgctactgtgtgcctgtgt
agggtaccttgggagccagctttgactttctactttgaggtccgaagaat
caaactgagttcagcaggtttgaccacaatgtctgttaccctctgactca
ccctcgctggccctctaccttatgttctgagtctctcagttaacagggat
ggggctggcatgaggccagggtagagcccatcagtttggttagacttggc
tgggtagcattccagggctatttgtaggtttgtgggaggaggacccacac
acctgcctcctacactggaggggttgggggagga
gaattcttaggacccactttaatcccttcgagacagtagtgccctgtgac
ctgaccacctctctttaaggcccccaccgcctctctataccagtatgctg
acaacaaaactttaacctgagtttagattgggacaaccatatctaaacca
cagtgatatcacgacgcaggagaggactggccggagtgaccccacgagca
tctgcagactcagggctagagcctgggtgtagcgacaacatctcctcccc
acccgcaacctcagcagcagctggctggtgactctcctcggctcaggctt
actcatttgacagacaacctgaagcagagcacagagcacggcagcttagc
tctgcctctcagggcccttgtctgtgtacgcttcggcttggaccaggttt
ttattgaactcttagaaacgtataggcatacgccagggcttgcctggcat
tcttcaatagaaaggatataggaagggaatctatgggggcttggcatgga
ggtagcaggcaatgctgcccttcctgcatctctacccaaagcactctgca
ggagcctggccgggacactggtacatgatcctcctaaatgcctttgaatg
catcttctctctctcccctaccccgtcgcctccctctccccctctctctc
cct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60438330_60439212
seq2: B6Ng01-143A15.b_48_931

seq1  GAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCCAATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCTTTGCTTGGGATATTCTTTTCTTGATTGTTTCCAATCAG  50

seq1  CGAACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACAATGTCTCACCTTCATGCCCTGAATGACTGGTTGTTGAATGACCT  100

seq1  GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTATCTTAAGTCGACCTCCTTTTGAAGCGACAAAGCATGATAAACC  150

seq1  ATACAGTGCAGTAAACCTTTAACGCAAGCGGAGTTGACTTTCTCTGGCCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTGCAGTAAACCTTTAACGCAAGCGGAGTTGACTTTCTCTGGCCG  200

seq1  AAGGAGGTCTGTCTACCCATCTGAGGAAAGGCCTGCTTTGTGCTTCTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGTCTGTCTACCCATCTGAGGAAAGGCCTGCTTTGTGCTTCTCCC  250

seq1  TGTGCTTGTAGGTCACGTTCTTAAAAGTGCTGGTGGAACCTCGGTACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTGTAGGTCACGTTCTTAAAAGTGCTGGTGGAACCTCGGTACAGA  300

seq1  GGATTGGTTCCCTAAAGAACAGTAGGGGGAAAAAACGGTTCAAAGAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGTTCCCTAAAGAACAGTAGGGGGAAAAAACGGTTCAAAGAAAAG  350

seq1  ATGCATTTTGTTAGTACACCATTTCCACATCTTCAAATATTTGTGTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTTGTTAGTACACCATTTCCACATCTTCAAATATTTGTGTTATA  400

seq1  GTTCAAATGGGAGAGCAAAGCTCTATCTTGGAAGCTATTTGAATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAATGGGAGAGCAAAGCTCTATCTTGGAAGCTATTTGAATTTATTT  450

seq1  TGATAAATTTTAAATTTTATCCACCTTTATCTCATTTATGTTGTTATTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATTTTAAATTTTATCCACCTTTATCTCATTTATGTTGTTATTTC  500

seq1  ATGTTATATGCGTATGCACATCTCTGAAATTATTATTTTTAATTTTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATATGCGTATGCACATCTCTGAAATTATTATTTTTAATTTTATTA  550

seq1  CACCAATTTGTGTAGCAGAAGGGCACTTGTGTGCTACTGTGTGCCTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATTTGTGTAGCAGAAGGGCACTTGTGTGCTACTGTGTGCCTGTGT  600

seq1  AGGGTACCTTGGGAGCCAGCTTTGACTTTCTACTTTGAGGTCCGAAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTACCTTGGGAGCCAGCTTTGACTTTCTACTTTGAGGTCCGAAGAAT  650

seq1  CAAACTGAGTTCAGCAGGTTTGACCACAATGTCTGTTACCCTCTGACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGAGTTCAGCAGGTTTGACCACAATGTCTGTTACCCTCTGACTCA  700

seq1  CCCTCGCTGGCCCTCTACCTTATGTTCTGAGTCTCTCAGTTAACAGGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGCTGGCCCTCTACCTTATGTTCTGAGTCTCTCAGTTAACAGGGAT  750

seq1  GGGGCTGGCATGAGGCCAGGGTAGAGCCCATCAGTTTGGTTAGACTTGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTGGCATGAGGCCAGGGTAGAGCCCATCAGTTTGGTTAGACTTGGC  800

seq1  TGGGTAGCATTCCAGGGCTATTTGTAGGTTTGTGGGAGGAGGACCCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGCATTCCAGGGCTATTTGTAGGTTTGTGGGAGGAGGACCCACAC  850

seq1  ACCTGCCTCCTACACTGGAGGGG-TGGGGGAGGA  883
      ||||||||||||||||||||||| ||||||||||
seq2  ACCTGCCTCCTACACTGGAGGGGTTGGGGGAGGA  884

seq1: chr2_60553637_60554289
seq2: B6Ng01-143A15.g_66_718 (reverse)

seq1  AGGGGGAGAGAGGGGGAGAGGGAGGGGAGGGGGTAGGGGAGAGAGAGAAG  50
      |||| |||||||||||||||||||| || |||||||||||||||||||||
seq2  AGGGAGAGAGAGGGGGAGAGGGAGGCGACGGGGTAGGGGAGAGAGAGAAG  50

seq1  ATGCATTCAAAGGCATTTAGGAGGATCATGTACCAGTGTCCCGGCCAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTCAAAGGCATTTAGGAGGATCATGTACCAGTGTCCCGGCCAGGC  100

seq1  TCCTGCAGAGTGCTTTGGGTAGAGATGCAGGAAGGGCAGCATTGCCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCAGAGTGCTTTGGGTAGAGATGCAGGAAGGGCAGCATTGCCTGCT  150

seq1  ACCTCCATGCCAAGCCCCCATAGATTCCCTTCCTATATCCTTTCTATTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCATGCCAAGCCCCCATAGATTCCCTTCCTATATCCTTTCTATTGA  200

seq1  AGAATGCCAGGCAAGCCCTGGCGTATGCCTATACGTTTCTAAGAGTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCCAGGCAAGCCCTGGCGTATGCCTATACGTTTCTAAGAGTTCAA  250

seq1  TAAAAACCTGGTCCAAGCCGAAGCGTACACAGACAAGGGCCCTGAGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACCTGGTCCAAGCCGAAGCGTACACAGACAAGGGCCCTGAGAGGC  300

seq1  AGAGCTAAGCTGCCGTGCTCTGTGCTCTGCTTCAGGTTGTCTGTCAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAAGCTGCCGTGCTCTGTGCTCTGCTTCAGGTTGTCTGTCAAATG  350

seq1  AGTAAGCCTGAGCCGAGGAGAGTCACCAGCCAGCTGCTGCTGAGGTTGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGCCTGAGCCGAGGAGAGTCACCAGCCAGCTGCTGCTGAGGTTGCG  400

seq1  GGTGGGGAGGAGATGTTGTCGCTACACCCAGGCTCTAGCCCTGAGTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGGAGGAGATGTTGTCGCTACACCCAGGCTCTAGCCCTGAGTCTGC  450

seq1  AGATGCTCGTGGGGTCACTCCGGCCAGTCCTCTCCTGCGTCGTGATATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTCGTGGGGTCACTCCGGCCAGTCCTCTCCTGCGTCGTGATATCA  500

seq1  CTGTGGTTTAGATATGGTTGTCCCAATCTAAACTCAGGTTAAAGTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTTTAGATATGGTTGTCCCAATCTAAACTCAGGTTAAAGTTTTGT  550

seq1  TGTCAGCATACTGGTATAGAGAGGCGGTGGGGGCCTTAAAGAGAGGTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCATACTGGTATAGAGAGGCGGTGGGGGCCTTAAAGAGAGGTGGT  600

seq1  CAGGTCACAGGGCACTACTGTCTCGAAGGGATTAAAGTGGGTCCTAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCACAGGGCACTACTGTCTCGAAGGGATTAAAGTGGGTCCTAAGAA  650

seq1  TTC  653
      |||
seq2  TTC  653