BAC Information

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BAC

Clone NameB6Ng01-143A22
Chromosome2 (Build37)
Map Location 131,022,203 - 131,134,130
singlet/doubletdoublet
Overlap geneCdc25b, 2310035K24Rik, D430028G21Rik, Pank2, Rnf24
Upstream geneTmc2, Nol5a, Idh3b, Ebf4, LOC668899, Cpxm1, LOC100043446, 1700020A23Rik, 4933425O20Rik, A930025D01Rik, Vps16, Ptpra, Mrps26, Oxt, Avp, 1700012O15Rik, Ubox5, Fastkd5, Prosapip1, 2600009E05Rik, Itpa, Slc4a11, 4930402H24Rik, LOC100043766, C030014O09Rik, LOC627316, Atrn, LOC100043768, Gfra4, Adam33, Siglec1, LOC100043457, Hspa12b, 1700037H04Rik, Spef1, Cenpb
Downstream geneLOC100043463, Smox, Adra1d, Lamr1-ps1, Prnp, Prnd, Rassf2, Slc23a2, LOC626513, LOC100043470, EG329521, 5730494N06Rik, Pcna, Cds2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143A22.bB6Ng01-143A22.g
ACCDH941097DH941098
length9751,012
definitionDH941097|Mus musculus domesticus DNA, BAC clone: B6Ng01-143A22, 5' end.DH941098|Mus musculus domesticus DNA, BAC clone: B6Ng01-143A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,133,149 - 131,134,130)(131,022,203 - 131,023,231)
sequence
gaattctcttactatgggttcatcttcgcttttcctttgtcagtttatac
cacagaatagagcaatttgattttctaatgtgatcttttatttgaagcta
tagaaaatttaggtgataggataagatgacggaatttcagccagtatttg
tcgaagaaaaatgttgtcatctgtaacacttcaagtcaccactgacttaa
tggagtgcatatcccactgtgtgggtctcctcttttatgaacaatagggg
ctgcccagaggagccagctgtgttcctgtgttcactcttgcccttgggtc
agcagcctttcacccacatgtttttgatcaccccagcttgctttgttggt
gttggcatgttttgttgttttaagcaggatcttactaaatgcccagggtt
gacctgggacctattttgtagtccaggctggtctgaacatgatgcaatcc
ccatcacggccttccaagtgctaacaggcctgtgttgccatgctgataga
cgctaccttttcttgaagcaaaaacagtagtttatacttccatgtatcat
ctattaatattttactgctaacataatcaaatagtggtcctagatttccc
ttaattttggccccaaacatgacattgttgatgtccttagcttctctgag
acagtaagagaggtggcttctttggctctgctgactctgaggtcacattt
tagagttgtgtgtccttctgtttgactgtgtggaagtgtttgaggggaac
tcattgtgcaccgtgcatgactactgtggcctctggcgtctgccatgtgg
gcctagcacagatgaatgctgaagtttctaaatgaataagtcgcctgtct
cagtcctgtcataatcttaagtatctacagacgtttggtatagttaacta
tagagtaaactggccttgatggtcatttaataggtagattcacggagaac
tggtgaggtgagtgaggtgagtgag
gaattcttttttttttttttttctttcttcgagacaggctttctctgtat
agccctggctgtcctggaactcactctgtagaccaggctggcctcgaact
gagaaatccgcctgcctctgcctcccaaatgctgggattaaaggcgtgcg
ccaccacgcccagcctgcctcagaattctacgtagctaggcttacaggct
tgtaccaccagaccaggctcttgagtggaccttgactgtgtcaaggacct
tgactctcttgcttcctctttcctgggacgtgtcattgagtgctgtaaca
ggttatgaaacagctttccagaaacagtggccactcctggtttacctctg
ccttcaccagagtgtcctctacctagtagccaggcttgtagtaggtgcat
tcctgtgctgaggagtctgtgtacttgggaggctcttaaagcagtgtgta
cagggcatggcctcttcctgacatgtggcctgccctgaacctcctccaat
gttgctccaggtgccgcttcatcagggaacgggaccgtgcagctaacgac
taccccagcctgtactacccggagatgtacatcctcaaaggcggctacaa
ggagttcttcccacagcatccggtactatgggtgggatggccacagctct
cctggcatggactgtagggacagggtccaactaggctttaggccccaccc
ccaccccagaacttcctctttctcccatactgatgggctctcttcatctt
cccatcctctagaacttttgtgagccccaggactaccgacccatgaacca
cgaggctttcagggatgagctgaggatctttcgccttaagactcgcagct
gggctggggaacggagcaggagggaactttgtagcagctgcagaccagtg
atgatgagcctgctgcatcttacctcgtgagcttgggagcagtggtccat
ggcctgtgagcactactatagagcctcaggtgctataggggttggggcat
ggtgtggtgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_131133149_131134130
seq2: B6Ng01-143A22.b_49_1023 (reverse)

seq1  CTCACCTCACCTCACCTCACCTCACCAGTTCTCCGTGAATTCTACCTATT  50
      |||| ||||||||| |||||||||||||||||||||||| ||||||||||
seq2  CTCA-CTCACCTCA-CTCACCTCACCAGTTCTCCGTGAA-TCTACCTATT  47

seq1  AAATGACCATCAAGGCCAGTTTTACTCTATAGTTAACTTATACCCAAACG  100
      ||||||||||||||||||| ||||||||||||||||| |||| |||||||
seq2  AAATGACCATCAAGGCCAG-TTTACTCTATAGTTAAC-TATA-CCAAACG  94

seq1  TCTTGTAGATACTTAAGATTATGACAGGACTGAGACAGGCGACTTATTCA  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-TGTAGATACTTAAGATTATGACAGGACTGAGACAGGCGACTTATTCA  143

seq1  TTTAGAAACTTCAGCATTCATCTGTGCTAGGCCCACATGGCAGACGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAACTTCAGCATTCATCTGTGCTAGGCCCACATGGCAGACGCCAG  193

seq1  AGGCCACAGTAGTCATGCACGGTGCACAATGAGTTCCCCTCAAACACTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACAGTAGTCATGCACGGTGCACAATGAGTTCCCCTCAAACACTTC  243

seq1  CACACAGTCAAACAGAAGGACACACAACTCTAAAATGTGACCTCAGAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGTCAAACAGAAGGACACACAACTCTAAAATGTGACCTCAGAGTC  293

seq1  AGCAGAGCCAAAGAAGCCACCTCTCTTACTGTCTCAGAGAAGCTAAGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGCCAAAGAAGCCACCTCTCTTACTGTCTCAGAGAAGCTAAGGAC  343

seq1  ATCAACAATGTCATGTTTGGGGCCAAAATTAAGGGAAATCTAGGACCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACAATGTCATGTTTGGGGCCAAAATTAAGGGAAATCTAGGACCACT  393

seq1  ATTTGATTATGTTAGCAGTAAAATATTAATAGATGATACATGGAAGTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTATGTTAGCAGTAAAATATTAATAGATGATACATGGAAGTATA  443

seq1  AACTACTGTTTTTGCTTCAAGAAAAGGTAGCGTCTATCAGCATGGCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTGTTTTTGCTTCAAGAAAAGGTAGCGTCTATCAGCATGGCAACA  493

seq1  CAGGCCTGTTAGCACTTGGAAGGCCGTGATGGGGATTGCATCATGTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTGTTAGCACTTGGAAGGCCGTGATGGGGATTGCATCATGTTCAG  543

seq1  ACCAGCCTGGACTACAAAATAGGTCCCAGGTCAACCCTGGGCATTTAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCCTGGACTACAAAATAGGTCCCAGGTCAACCCTGGGCATTTAGTA  593

seq1  AGATCCTGCTTAAAACAACAAAACATGCCAACACCAACAAAGCAAGCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTGCTTAAAACAACAAAACATGCCAACACCAACAAAGCAAGCTGG  643

seq1  GGTGATCAAAAACATGTGGGTGAAAGGCTGCTGACCCAAGGGCAAGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATCAAAAACATGTGGGTGAAAGGCTGCTGACCCAAGGGCAAGAGTG  693

seq1  AACACAGGAACACAGCTGGCTCCTCTGGGCAGCCCCTATTGTTCATAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGAACACAGCTGGCTCCTCTGGGCAGCCCCTATTGTTCATAAAA  743

seq1  GAGGAGACCCACACAGTGGGATATGCACTCCATTAAGTCAGTGGTGACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGACCCACACAGTGGGATATGCACTCCATTAAGTCAGTGGTGACTT  793

seq1  GAAGTGTTACAGATGACAACATTTTTCTTCGACAAATACTGGCTGAAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTACAGATGACAACATTTTTCTTCGACAAATACTGGCTGAAATT  843

seq1  CCGTCATCTTATCCTATCACCTAAATTTTCTATAGCTTCAAATAAAAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCATCTTATCCTATCACCTAAATTTTCTATAGCTTCAAATAAAAGAT  893

seq1  CACATTAGAAAATCAAATTGCTCTATTCTGTGGTATAAACTGACAAAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAGAAAATCAAATTGCTCTATTCTGTGGTATAAACTGACAAAGGA  943

seq1  AAAGCGAAGATGAACCCATAGTAAGAGAATTC  982
      ||||||||||||||||||||||||||||||||
seq2  AAAGCGAAGATGAACCCATAGTAAGAGAATTC  975

seq1: chr2_131022203_131023231
seq2: B6Ng01-143A22.g_66_1077

seq1  GAATTCTTTTTTTTTTTTTTTTCTTTCTTCGAGACAGGCTTTCTCTGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTTTTTTTTTCTTTCTTCGAGACAGGCTTTCTCTGTAT  50

seq1  AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACT  100

seq1  GAGAAATCCGCCTGCCTCTGCCTCCCAAATGCTGGGATTAAAGGCGTGCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATCCGCCTGCCTCTGCCTCCCAAATGCTGGGATTAAAGGCGTGCG  150

seq1  CCACCACGCCCAGCCTGCCTCAGAATTCTACGTAGCTAGGCTTACAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACGCCCAGCCTGCCTCAGAATTCTACGTAGCTAGGCTTACAGGCT  200

seq1  TGTACCACCAGACCAGGCTCTTGAGTGGACCTTGACTGTGTCAAGGACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCACCAGACCAGGCTCTTGAGTGGACCTTGACTGTGTCAAGGACCT  250

seq1  TGACTCTCTTGCTTCCTCTTTCCTGGGACGTGTCATTGAGTGCTGTAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCTTGCTTCCTCTTTCCTGGGACGTGTCATTGAGTGCTGTAACA  300

seq1  GGTTATGAAACAGCTTTCCAGAAACAGTGGCCACTCCTGGTTTACCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGAAACAGCTTTCCAGAAACAGTGGCCACTCCTGGTTTACCTCTG  350

seq1  CCTTCACCAGAGTGTCCTCTACCTAGTAGCCAGGCTTGTAGTAGGTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCACCAGAGTGTCCTCTACCTAGTAGCCAGGCTTGTAGTAGGTGCAT  400

seq1  TCCTGTGCTGAGGAGTCTGTGTACTTGGGAGGCTCTTAAAGCAGTGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGCTGAGGAGTCTGTGTACTTGGGAGGCTCTTAAAGCAGTGTGTA  450

seq1  CAGGGCATGGCCTCTTCCTGACATGTGGCCTGCCCTGAACCTCCTCCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCATGGCCTCTTCCTGACATGTGGCCTGCCCTGAACCTCCTCCAAT  500

seq1  GTTGCTCCAGGTGCCGCTTCATCAGGGAACGGGACCGTGCAGCTAACGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCCAGGTGCCGCTTCATCAGGGAACGGGACCGTGCAGCTAACGAC  550

seq1  TACCCCAGCCTGTACTACCCGGAGATGTACATCCTCAAAGGCGGCTACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCAGCCTGTACTACCCGGAGATGTACATCCTCAAAGGCGGCTACAA  600

seq1  GGAGTTCTTCCCACAGCATCCGGTACTATGGGTGGGATGGCCACAGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCTTCCCACAGCATCCGGTACTATGGGTGGGATGGCCACAGCTCT  650

seq1  CCTGGCATGGACTGTAGGGACAGGGTCCAACTAGGCTTTAGGCCCCACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCATGGACTGTAGGGACAGGGTCCAACTAGGCTTTAGGCCCCACCC  700

seq1  CCACCCCAGAACTTCCTCTTTCTCCCATACTGATGGGCTCTCTTCATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCAGAACTTCCTCTTTCTCCCATACTGATGGGCTCTCTTCATCTT  750

seq1  CCCATCCTCTAGAACTTTTGTGAGCCCCAGGACTACCGACCCATGAACCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCTCTAGAACTTTTGTGAGCCCCAGGACTACCGACCCATGAACCA  800

seq1  CGAGGCTTTCAGGGATGAGCTGAGGAACTTTCGCCTTAAGACTCGCAGCT  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CGAGGCTTTCAGGGATGAGCTGAGGATCTTTCGCCTTAAGACTCGCAGCT  850

seq1  GGGCTGGGGAACGGAGCAGGAGGGAACTTTGTAGCAGGCTGCAAGACCAG  900
      |||||||||||||||||||||||||||||||||||| ||||| |||||||
seq2  GGGCTGGGGAACGGAGCAGGAGGGAACTTTGTAGCA-GCTGC-AGACCAG  898

seq1  TGATGATGAGCCTGCTGCCATCCTTACCTCGTGAGGCTTGGGAGCCAGTG  950
      ||||||||||||||||| ||| |||||||||||| ||||||||| |||||
seq2  TGATGATGAGCCTGCTG-CAT-CTTACCTCGTGA-GCTTGGGAG-CAGTG  944

seq1  GGTCCCATGGGCCTGTGAGGCCACCTACCTTATAGAGGCCTCAGGTGCTA  1000
      |   |||| ||||||||||  || ||||  |||||| |||||||||||||
seq2  G--TCCAT-GGCCTGTGAG--CA-CTAC--TATAGA-GCCTCAGGTGCTA  985

seq1  TAGGGGGTTGGGGGCATGGTGTGGTGTCA  1029
      ||||||  | |||||||||||||||||||
seq2  TAGGGG--TTGGGGCATGGTGTGGTGTCA  1012