BAC Information

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BAC

Clone NameB6Ng01-143G07
Chromosome2 (Build37)
Map Location 141,818,728 - 141,980,221
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneLOC668913, LOC668914, Kif16b, Snrpb2, Otor, LOC668915
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143G07.bB6Ng01-143G07.g
ACCDH941339DH941340
length1,1431,126
definitionDH941339|Mus musculus domesticus DNA, BAC clone: B6Ng01-143G07, 5' end.DH941340|Mus musculus domesticus DNA, BAC clone: B6Ng01-143G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(141,818,728 - 141,819,886)(141,979,086 - 141,980,221)
sequence
gaattccataaactgactggagttttttctactctctctatatgcattct
ttttaaattttttgtaaaacaatcttagatgaaatgctagaactaaatat
ggtcatctctgaatgggagggtaatagatcaaaaaattttcatcacctga
gatgaggcctctattgtgttgtgcctatagactcccatgagataaaacct
tgaaaacagtgactagctggcatctacacctcctctcaactctactgccc
tgagattgtgaaaaattatgttttcctaatacatggcatttctgaaactt
tcatcgatacaatgaagtagaagtggaatcagagggcattaatttttaca
aagcctcacagtggatccatcccctgctttgtggtggaatgaatgcccag
acatggaatctgtgagtaataatagaaagtgtggttgagcctgtgaactc
cttgtctcaaaattagattctgaacatttgcagccattgctagagccttg
gcttgtactttacagaattattggactgaattatttcatttggtcccagt
gtgccttgtcaactgaaaatattgtcccagagagttaacaaaacaatatt
ttgtaaagaaatcattcctgcagggatagggaaacctgttggtaacctga
gtctctgaccagtgatatcaaacagacacaggctgggaaagatccagggt
tcactaagctgattaaatcacaaggaaatggcaaagcttaccccagcgcc
ctgaagcccagtctcctttggacctagaggaggtttgaaactgtgtgttt
ataattttttcctgcatagatgacagaatggacagtttaatgacttctca
ttgtggttgggccttagctttaaatgagaagttcttcattttccatgtct
agtacttacacatcccttgattatccttaaatactgtggctggttataga
ttctagctcagtttccaaatcaagtatgttttaccacaaatgcatgaaca
catagcaatagtttgcttctctcttgtctgagagtaagagaacatgtagc
tcttttcttttctcctgattcattcactttccctagtgacataaccttgt
gatggatactacagcattcagtctcacttctttctcagataaa
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaacat
gctcagcatccttaatcatcagagaaatgcaaatcaaaataacccggaga
ttccatctcacactagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcaaggatgtggagaaagaggaacactcctcccttgtgaag
actttctatgtttaaatttcaaccgacttcacaagggttttctgaaaaca
aaaattacctttataagagcaatggcttttttaaaatgcattttcagact
taagactatagatgaattataatttagccaaatatagataatgttagata
tattctagagtctgctatagctggctctggaaatattaatttaatttggc
tacagtgtctttttttccaatagaatcagtataattagtgtgtttgcatt
ttacttggtgctgtcttagaagataatgtaatgaacctgtcagagatgag
aacatgcccaggcttggagtcattttataactcaaaataataagataaag
aagcacctttgaacaaattttattttgtccttaagttaaggttatatgct
ctggactaatgagtcacctggagaatattatcactgctgcatcatggtca
taaagaaatatttcacatgaacttgtacagccccactttggaaacaacgc
tatcacctccggtataatctgtgggtcaaaagcagttgtacagatgaagc
aaaagttaagtagcagggtctccatttctcagcacgagacataacaggga
tgatgatgtggagtggttgagaactgggtgtgatgactcaacctcaccac
agtgagaactcaccacagttggactctgctctcgttctgtgatcttgctg
attgaagcagtgctatacatgctctaaacgcctttctgtcctgctcttta
gggagaggtatgcaacaggggcttcttttgatttatgaagacaaaatatt
agctctaattgtgggccttgatatgaggaggccacattcaaatgtaagaa
gaagactatgccgactcatggctagtaatcctcgtgaaataggagaaatt
ttagggagagggagacaaaggccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_141818728_141819886
seq2: B6Ng01-143G07.b_46_1188

seq1  GAATTCCATAAACTGACTGGAGTTTTTTCTACTCTCTCTATATGCATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAACTGACTGGAGTTTTTTCTACTCTCTCTATATGCATTCT  50

seq1  TTTTAAATTTTTTGTAAAACAATCTTAGATGAAATGCTAGAACTAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTTTTTGTAAAACAATCTTAGATGAAATGCTAGAACTAAATAT  100

seq1  GGTCATCTCTGAATGGGAGGGTAATAGATCAAAAAATTTTCATCACCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATCTCTGAATGGGAGGGTAATAGATCAAAAAATTTTCATCACCTGA  150

seq1  GATGAGGCCTCTATTGTGTTGTGCCTATAGACTCCCATGAGATAAAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGCCTCTATTGTGTTGTGCCTATAGACTCCCATGAGATAAAACCT  200

seq1  TGAAAACAGTGACTAGCTGGCATCTACACCTCCTCTCAACTCTACTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAGTGACTAGCTGGCATCTACACCTCCTCTCAACTCTACTGCCC  250

seq1  TGAGATTGTGAAAAATTATGTTTTCCTAATACATGGCATTTCTGAAACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTGTGAAAAATTATGTTTTCCTAATACATGGCATTTCTGAAACTT  300

seq1  TCATCGATACAATGAAGTAGAAGTGGAATCAGAGGGCATTAATTTTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGATACAATGAAGTAGAAGTGGAATCAGAGGGCATTAATTTTTACA  350

seq1  AAGCCTCACAGTGGATCCATCCCCTGCTTTGTGGTGGAATGAATGCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCACAGTGGATCCATCCCCTGCTTTGTGGTGGAATGAATGCCCAG  400

seq1  ACATGGAATCTGTGAGTAATAATAGAAAGTGTGGTTGAGCCTGTGAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGAATCTGTGAGTAATAATAGAAAGTGTGGTTGAGCCTGTGAACTC  450

seq1  CTTGTCTCAAAATTAGATTCTGAACATTTGCAGCCATTGCTAGAGCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTCAAAATTAGATTCTGAACATTTGCAGCCATTGCTAGAGCCTTG  500

seq1  GCTTGTACTTTACAGAATTATTGGACTGAATTATTTCATTTGGTCCCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTACTTTACAGAATTATTGGACTGAATTATTTCATTTGGTCCCAGT  550

seq1  GTGCCTTGTCAACTGAAAATATTGTCCCAGAGAGTTAACAAAACAATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTGTCAACTGAAAATATTGTCCCAGAGAGTTAACAAAACAATATT  600

seq1  TTGTAAAGAAATCATTCCTGCAGGGATAGGGAAACCTGTTGGTAACCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAGAAATCATTCCTGCAGGGATAGGGAAACCTGTTGGTAACCTGA  650

seq1  GTCTCTGACCAGTGATATCAAACAGACACAGGCTGGGAAAGATCCAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGACCAGTGATATCAAACAGACACAGGCTGGGAAAGATCCAGGGT  700

seq1  TCACTAAGCTGATTAAATCACAAGGAAATGGCAAAGCTTACCCCAGCGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAGCTGATTAAATCACAAGGAAATGGCAAAGCTTACCCCAGCGCC  750

seq1  CTGAAGCCCAGTCTCCTTTGGACCTAGAGGAGGTTTGAAACTGTGTGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCCCAGTCTCCTTTGGACCTAGAGGAGGTTTGAAACTGTGTGTTT  800

seq1  ATAATTTTTTCCTGCATAGATGACAGAATGGACAGTTTAATGACTTCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTTCCTGCATAGATGACAGAATGGACAGTTTAATGACTTCTCA  850

seq1  TTGTGGTT-GGCCTTAGCTTTAAATGAGAAGTTCTTCATTTTCCATGTCT  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTGGGCCTTAGCTTTAAATGAGAAGTTCTTCATTTTCCATGTCT  900

seq1  AGTACTTACACATCCCTTGATTATCCTTAAATACTGTGGCTGGTTATAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTACACATCCCTTGATTATCCTTAAATACTGTGGCTGGTTATAGA  950

seq1  TTCTAGCTCAGTTTCCAAATCAAGTATGTTTTACCCACAAATGCATGAAC  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCTAGCTCAGTTTCCAAATCAAGTATGTTTTA-CCACAAATGCATGAAC  999

seq1  ACATAGCAATAGTTTTGCTTCTCTCTTTGTCTTGAAGGAAGGTAAGAG-A  1048
      |||||||||||| |||||||||||| ||||||     ||  ||||||| |
seq2  ACATAGCAATAG-TTTGCTTCTCTC-TTGTCT-----GAGAGTAAGAGAA  1042

seq1  CATGTAGCTCTTTTCTTTTCTCCTGGAATTCATTCACTTTCCCTAGTGAC  1098
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  CATGTAGCTCTTTTCTTTTCTCCTG--ATTCATTCACTTTCCCTAGTGAC  1090

seq1  AATAACACTTGTGATGGGTATCTACAAACCATTCCCAGTCTCACTCTCTT  1148
       ||||| |||||||||| || ||||  | ||||  |||||||||| ||||
seq2  -ATAAC-CTTGTGATGGATA-CTAC--AGCATT--CAGTCTCACT-TCTT  1132

seq1  CTTCAGATAAA  1159
        |||||||||
seq2  TCTCAGATAAA  1143

seq1: chr2_141979086_141980221
seq2: B6Ng01-143G07.g_66_1191 (reverse)

seq1  CCTGGCCTTTGTTCTTCCTCTACCTTAATATTCCTCCTATTTTCAGAGGA  50
      ||||||||||| ||| ||||| || ||| ||| |||||||||   |||||
seq2  CCTGGCCTTTG-TCTCCCTCT-CCCTAAAATTTCTCCTATTTCACGAGGA  48

seq1  TGTACTAGCCATGAGTCAGCTTAGTCTCTTTCTTACATTTGATTGTGGGC  100
      | ||||||||||||||| || ||||||  ||||||||||||| ||| |||
seq2  T-TACTAGCCATGAGTCGGCATAGTCTTCTTCTTACATTTGAATGT-GGC  96

seq1  CTCCTCATAATCAAGGCCAACAA-TAGAGGCCTAATATTTTGTCCTTCAT  149
      |||||||| ||||||||| |||| |||||  |||||||||||| ||||||
seq2  CTCCTCAT-ATCAAGGCCCACAATTAGAG--CTAATATTTTGT-CTTCAT  142

seq1  ATATCAAAAGAAGCCCCTTGTTGCATACCTCTCCCTAAAGAGCAGGGACA  199
      | ||||||||||||||| |||||||||||||||||||||||||| |||||
seq2  AAATCAAAAGAAGCCCC-TGTTGCATACCTCTCCCTAAAGAGCA-GGACA  190

seq1  GAAAGGCGTTTAGAGCATGTATAGCACTGCTTCAATCAGCAAGATCCACA  249
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAAAGGCGTTTAGAGCATGTATAGCACTGCTTCAATCAGCAAGAT-CACA  239

seq1  GAACGAGAGCAGAGTCCAACTGTGGTGAGTTCTCACTGTGGTGA-GTTGA  298
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAACGAGAGCAGAGTCCAACTGTGGTGAGTTCTCACTGTGGTGAGGTTGA  289

seq1  GTCATCACACCCAGTTCTCAACCACTCCACATCATCATCCCTGTTATTGT  348
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GTCATCACACCCAGTTCTCAACCACTCCACATCATCATCCCTGTTA-TGT  338

seq1  CTCGTGCTGAGAAATGGAGACCCTGCTACTTAACTTTTGCTTCATCTGTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGCTGAGAAATGGAGACCCTGCTACTTAACTTTTGCTTCATCTGTA  388

seq1  CAACTGCTTTTGACCCACAGATTATACCGGAGGTGATAGCGTTGTTTCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGCTTTTGACCCACAGATTATACCGGAGGTGATAGCGTTGTTTCCA  438

seq1  AAGTGGGGCTGTACAAGTTCATGTGAAATATTTCTTTATGACCATGATGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGGCTGTACAAGTTCATGTGAAATATTTCTTTATGACCATGATGC  488

seq1  AGCAGTGATAATATTCTCCAGGTGACTCATTAGTCCAGAGCATATAACCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGATAATATTCTCCAGGTGACTCATTAGTCCAGAGCATATAACCT  538

seq1  TAACTTAAGGACAAAATAAAATTTGTTCAAAGGTGCTTCTTTATCTTATT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTAAGGACAAAATAAAATTTGTTCAAAGGTGCTTCTTTATCTTATT  588

seq1  ATTTTGAGTTATAAAATGACTCCAAGCCTGGGCATGTTCTCATCTCTGAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGTTATAAAATGACTCCAAGCCTGGGCATGTTCTCATCTCTGAC  638

seq1  AGGTTCATTACATTATCTTCTAAGACAGCACCAAGTAAAATGCAAACACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCATTACATTATCTTCTAAGACAGCACCAAGTAAAATGCAAACACA  688

seq1  CTAATTATACTGATTCTATTGGAAAAAAAGACACTGTAGCCAAATTAAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATACTGATTCTATTGGAAAAAAAGACACTGTAGCCAAATTAAAT  738

seq1  TAATATTTCCAGAGCCAGCTATAGCAGACTCTAGAATATATCTAACATTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTCCAGAGCCAGCTATAGCAGACTCTAGAATATATCTAACATTA  788

seq1  TCTATATTTGGCTAAATTATAATTCATCTATAGTCTTAAGTCTGAAAATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATTTGGCTAAATTATAATTCATCTATAGTCTTAAGTCTGAAAATG  838

seq1  CATTTTAAAAAAGCCATTGCTCTTATAAAGGTAATTTTTGTTTTCAGAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAAAAAGCCATTGCTCTTATAAAGGTAATTTTTGTTTTCAGAAA  888

seq1  ACCCTTGTGAAGTCGGTTGAAATTTAAACATAGAAAGTCTTCACAAGGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTGTGAAGTCGGTTGAAATTTAAACATAGAAAGTCTTCACAAGGGA  938

seq1  GGAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATCTGCTGTCACCTGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTTCCTCTTTCTCCACATCCTTGCCAGCATCTGCTGTCACCTGAA  988

seq1  TTTTTGATCTTAGCCATTCTGACTAGTGTGAGATGGAATCTCCGGGTTAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATCTTAGCCATTCTGACTAGTGTGAGATGGAATCTCCGGGTTAT  1038

seq1  TTTGATTTGCATTTCTCTGATGATTAAGGATGCTGAGCATGTTTTTCAGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTGCATTTCTCTGATGATTAAGGATGCTGAGCATGTTTTTCAGG  1088

seq1  TGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTCAGCCATTCGGTATTCCTCAGGTGAGAATTC  1126