BAC Information

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BAC

Clone NameB6Ng01-143I01
Chromosome2 (Build37)
Map Location 43,504,553 - 43,505,587
singlet/doubletsinglet
Overlap geneKynu
Upstream geneLrp1b, LOC100041228, LOC100041245
Downstream geneArhgap15, Gtdc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143I01.bB6Ng01-143I01.g
ACCDH941421DH941422
length9901,020
definitionDH941421|Mus musculus domesticus DNA, BAC clone: B6Ng01-143I01, 5' end.DH941422|Mus musculus domesticus DNA, BAC clone: B6Ng01-143I01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttggtttaattttggtagtgctatataagcaatatcagttaatg
taggtcttttcttttggttagttaggaccaggatctctttgtcctgttta
tcctctcatagaaccatctctcagattcattgattctttgcactttgctt
gtttctatttttattaattctactctgctttttattactttttgccatct
gctacatttgagtttggtttgttcttgtttttccagatttttgaagttgt
aacattaagtcatttactgtgctctgaatttttaatgaagatatgtagaa
ctataaattcccctcataggactacttacaatgtgtcctacagattttca
gtgctatgtttttattttcatttagttccatgaacatttttatttctttc
ttgttccttctttgacccatttatcatttggtaatgcatggtccctgagt
ttgtgtatgtaccagatatctgctgctgattttaaattttgttacatcat
ggtcagattggatacatagaattaggtctatttttctgaatttgctggat
ttctttgtgtctacatatatgtgacatatatgtgttttttaaaagccttt
gtgtgaaacgctgacaccattgcatatgccagtaagattttgctgaaagg
accctcatatagctgtctcttgtgagactatgccggggcctagcaaacac
agaaagaagtggatgctcacagtcagctattggatggatcactgggcccc
gagtggaggagctgcaggaagtacccagggagctggggggaactgcaacc
ctataggtggacaacaatatgaactaaccataaccccccccccccacccc
cagagctaatgtctgtagctgtatatgtatcagacatggcctagtcggcc
atcagtggaagagagcacattgtcgtgcagacttatatgcttagtacagg
gaaactccagcaataggtggggagtggatatgtgggggat
gaattcataacaaccaagatacacataactgagatggccatgtacagatg
aatgcaccaagagacttcagcatacacacacaatggaatggcctcagcca
cataaaaattactgtcattggtggtaacactggagaatgctacacaaaat
gacaacacatagaaagtaacacctgtcttcactcatatggactgcagaag
taagcagagtagaagagttcactagagacagaaagaggcagaaaaaccat
tcaatgcagggagacaagaacagaggtttcagtgttttgcaggagagtag
gtgacaataattggcaaaaatgtgttggctatttcaaaaaaggagagaga
gtccccatgaatgaccattgtaatcatcattggcaacaagtccactggct
agctaagcctgcttctgcattggcatgatctccaaaccctcttccttaat
atttgtgtctttgatcaggcatgctaggttaattatgggaatgctctcct
tgtcttcagttttgttgcaagccccaaagctttaacccaggccctgaacc
tggactacagttctggatcctactgcagaagccaggatcaggctaatgcg
acctcccaaaccctgaactccaagtttttcagacacttggctcaccagaa
ccacctgttatttgttctgtttttgttttgttttgttttgttgtgttttt
ctgaggaaaatgtttttattcttgaattatttatgaaagcttctatctac
ctggaagtttagatctgaaagcctggcacccttcatgacctcctccacta
gtcttctctttgaattataaccatatgcaggctggtcactggggcagcct
cccagaagaacttctaaagtccagtacttaacttctttcatcctagccca
tgaatccaacttggttgattattttaacacatagtatttctgcaaaattg
cactgactaatctttagactaggacgagaacccatgcttacaaattgtta
catttattcctcagctcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_43504553_43505587
seq2: B6Ng01-143I01.g_67_1086 (reverse)

seq1  GATGAGCTGA-GAATAAATGTAAACAATTTGGTAAAGGCCAATGGGTTTC  49
      |||||||||| |||||||||| |||||||| ||||  ||  ||||| |||
seq2  GATGAGCTGAGGAATAAATGT-AACAATTT-GTAA--GC--ATGGG-TTC  43

seq1  TCCGTCCTTTGTTCTAAAGATTTAGGTCAGTTGCCAATTTTGGCAGAAAA  99
      | |||||  |  ||||||||||   ||||||   ||||||| |||| |||
seq2  T-CGTCC--TAGTCTAAAGATT--AGTCAGT--GCAATTTT-GCAG-AAA  84

seq1  TACTATGTGTTAAAATAATC-ACCAAGTTGGATTCATGGGGCTAGGATGA  148
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  TACTATGTGTTAAAATAATCAACCAAGTTGGATTCAT-GGGCTAGGATGA  133

seq1  AAGAAGTTAAGTACTGGACTTTAGAAGTTCTTCTGGGAGGCTGCCCCAGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTAAGTACTGGACTTTAGAAGTTCTTCTGGGAGGCTGCCCCAGT  183

seq1  GACCAGCCTGCATATGGTTATAATTCAAAGAGAAGACTAGTGGAGGAGGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGCCTGCATATGGTTATAATTCAAAGAGAAGACTAGTGGAGGAGGT  233

seq1  CATGAAGGGTGCCAGGCTTTCAGATCTAAACTTCCAGGTAGATAGAAGCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGGGTGCCAGGCTTTCAGATCTAAACTTCCAGGTAGATAGAAGCT  283

seq1  TTCATAAATAATTCAAGAATAAAAACATTTTCCTCAGAAAAACAAAACAA  348
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTCATAAATAATTCAAGAATAAAAACATTTTCCTCAGAAAAACACAACAA  333

seq1  AACAAAACAAAACAAAAACAGAACAAATAACAGGTGGTTCTGGTGAGCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAACAAAAACAGAACAAATAACAGGTGGTTCTGGTGAGCCA  383

seq1  AGTGTCTGAAAAACTTGGAGTTCAGGGTTTGGGAGGTCGCATTAGCCTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTGAAAAACTTGGAGTTCAGGGTTTGGGAGGTCGCATTAGCCTGA  433

seq1  TCCTGGCTTCTGCAGTAGGATCCAGAACTGTAGTCCAGGTTCAGGGCCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTTCTGCAGTAGGATCCAGAACTGTAGTCCAGGTTCAGGGCCTG  483

seq1  GGTTAAAGCTTTGGGGCTTGCAACAAAACTGAAGACAAGGAGAGCATTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAGCTTTGGGGCTTGCAACAAAACTGAAGACAAGGAGAGCATTCC  533

seq1  CATAATTAACCTAGCATGCCTGATCAAAGACACAAATATTAAGGAAGAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAACCTAGCATGCCTGATCAAAGACACAAATATTAAGGAAGAGG  583

seq1  GTTTGGAGATCATGCCAATGCAGAAGCAGGCTTAGCTAGCCAGTGGACTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAGATCATGCCAATGCAGAAGCAGGCTTAGCTAGCCAGTGGACTT  633

seq1  GTTGCCAATGATGATTACAATGGTCATTCATGGGGACTCTCTCTCCTTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAATGATGATTACAATGGTCATTCATGGGGACTCTCTCTCCTTTT  683

seq1  TTGAAATAGCCAACACATTTTTGCCAATTATTGTCACCTACTCTCCTGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATAGCCAACACATTTTTGCCAATTATTGTCACCTACTCTCCTGCA  733

seq1  AAACACTGAAACCTCTGTTCTTGTCTCCCTGCATTGAATGGTTTTTCTGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGAAACCTCTGTTCTTGTCTCCCTGCATTGAATGGTTTTTCTGC  783

seq1  CTCTTTCTGTCTCTAGTGAACTCTTCTACTCTGCTTACTTCTGCAGTCCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTGTCTCTAGTGAACTCTTCTACTCTGCTTACTTCTGCAGTCCA  833

seq1  TATGAGTGAAGACAGGTGTTACTTTCTATGTGTTGTCATTTTGTGTAGCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTGAAGACAGGTGTTACTTTCTATGTGTTGTCATTTTGTGTAGCA  883

seq1  TTCTCCAGTGTTACCACCAATGACAGTAATTTTTATGTGGCTGAGGCCAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGTGTTACCACCAATGACAGTAATTTTTATGTGGCTGAGGCCAT  933

seq1  TCCATTGTGTGTGTATGCTGAAGTCTCTTGGTGCATTCATCTGTACATGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGTGTGTGTATGCTGAAGTCTCTTGGTGCATTCATCTGTACATGG  983

seq1  CCATCTCAGTTATGTGTATCTTGGTTGTTATGAATTC  1035
      |||||||||||||||||||||||||||||||||||||
seq2  CCATCTCAGTTATGTGTATCTTGGTTGTTATGAATTC  1020