BAC Information

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BAC

Clone NameB6Ng01-143K14
Chromosome2 (Build37)
Map Location 142,776,650 - 142,777,696
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668913, LOC668914, Kif16b
Downstream geneSnrpb2, Otor, LOC668915, LOC668916, Pcsk2, Bfsp1, LOC100043799, LOC100043534, Dstn, Rrbp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143K14.bB6Ng01-143K14.g
ACCDH941539DH941540
length9071,154
definitionDH941539|Mus musculus domesticus DNA, BAC clone: B6Ng01-143K14, 5' end.DH941540|Mus musculus domesticus DNA, BAC clone: B6Ng01-143K14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcaattctgagccccattttttaatggagttatttgatt
ttctggagtccaccctcttcagttctttatatatattggatattagtccc
ctgtctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtatcttttgccttgcagaaactttgcagtttca
tgaggtcccatttgtcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcgaggcttttccccac
tttttcctctataagtttcaatgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataggaatggatcgattcgc
attcttctacatgataatagccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcactataccaataccatgcagttttttcctgtgtgtc
tttaagtgagttattaatgccctttttaaaatcctcgaccaccatcatga
tatatgattgtaaatcagtctttcttttcgggtgtgttggggtatccagg
attcgctgtagtgggcatacttggttttgatgatgccctgtggtcttggt
ttctgtctttcacaatctggtaatctctgcttttagatgttctagctgtc
tctggctggagcttgttccaactgtgattctttagcctctgtcagcactc
ctgggagaccaactctctcctgcatcccagtggtcagacactctctgcag
caagctc
gaattctttggttcatgctgagttccttgatccacttggacttaagtttt
ctgaaaggtgataaacatagatatattttcatatttctcaatacaaactg
ttacttaaaacagcaccatttgttgaatatgctttctttctttttttttt
ttttgattgtacgtttttgcttctttgtcaaatagtgtccatgtatatgt
gggcttatttatgggtcttcagttctattccattaattgagctgtctaca
tatgtaccaatacaatgtggattttaacactattgctctgtagtacagaa
caaggttaaggatggtaattcccccggaagttcttttcattttatgtatt
gttattgctatggtgggctttttgtttttctatatgaaattgagaattgc
tctttaattacatgtgaagaattgtgttggaatcttgatggagattgcat
taactctgttgattgctttttgggaggatagccaaatttacgatgtaaat
cctacaaatctaaaagcttgggagagctctccattttctgaggtcttctc
aattgctttcagggaagacttgaagttatagtcatacagatatttccctt
actttgtaagagttatgtcaagatattttatactatttctgcctactgtg
aagggtgttgtttttttaaaatattttccaatcttgcttatccattgtat
agagaaaggttaataatttatttgagttaattaattagccagccacttta
agttgtttattagctggagaaggactcatgtagatttttttgtggtatct
atggaatctaatatatcgttcacaaatgtgataccttgacaatttctttc
aatattttgtccccatgatctactatgtctatgctctatctagaacttca
gtactttatggatagatttgagagatgacatctgtctgccctttactaga
gatcatcagtactctccattattgagtgctgtgttgctgattgctttatt
atttagaagctggatactactctcaatattttactgaacgggttgtaatt
cgatctttccagccctttatgtattgctatacatcagcagctcagtctcc
cgaaccctaactatcggttgagggttctcaccactaatcctgacgtgtgc
ttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_142776650_142777696
seq2: B6Ng01-143K14.b_47_633 (reverse)

seq1  AAAAACTGCATGGTACTGGTATAGAGACAGACAAGTAGACCAATGGAATA  50
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  AAAAACTGCATGGTATTGGTATAGTGACAGACAAGTAGACCAATGGAATA  50

seq1  GAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGAAGACCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTC  100

seq1  GACAAGGGAGCTAAAACCATCCAGAGGAAGAAAGACAGCATTTTCAACAA  150
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GACAAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAA  150

seq1  TTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATGGGAATCGATC  200
       |||||||||||||||||| | |||||||||||||||||| |||||||||
seq2  ATGGTGCTGGCACAACTGGCTATTATCATGTAGAAGAATGCGAATCGATC  200

seq1  CATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTT  250
      ||| | ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTATCTCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTT  250

seq1  CACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAG  300
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  CACATAAAACCAGAGACATTGAAACTTATAGAGGAAAAAGTGGGGAAAAG  300

seq1  CCTTGAAGATATGGGCACAGGGGACAAATTCCTGAACAGAACAGCAATGG  350
      ||| |||||||||||||||||||| ||||||||||| |||||||||||||
seq2  CCTCGAAGATATGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAATGG  350

seq1  CTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAA  400
      |||||||||||||||| ||||| |||||||||||||| |||||||| |||
seq2  CTTGTGCTGTAAGATCAAGAATCGACAAATGGGACCTCATGAAACTGCAA  400

seq1  AGTTTCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAAC  450
      |||||||||||||||||||| || ||||||||||||||||| ||||||||
seq2  AGTTTCTGCAAGGCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAAC  450

seq1  AGATTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATAT  500
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGATTGGGAAAGGATCTTTACCTATCCTAAATCAGACAGGGGACTAATAT  500

seq1  CCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAAC  550
      |||| |||||||||||||| |||| |||||||| ||||||||||||||||
seq2  CCAATATATATAAAGAACTGAAGAGGGTGGACTCCAGAAAATCAAATAAC  550

seq1  CCCATTAAAAAATGGGGCTCACAAAACCATCCAGTGGAAGAAAGACAGCA  600
       |||||||||||||||||||| ||          | ||| |||||     
seq2  TCCATTAAAAAATGGGGCTCAGAA----------TTGAACAAAGAAT---  587

seq1  TTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCATGTAGAAGAATG  650
                                                        
seq2  --------------------------------------------------  587

seq1  CGAATCGATCCATACTTATCTCCTTGTACTAAGGTCAAATCTAAGTGGAT  700
                                                        
seq2  --------------------------------------------------  587

seq1  CAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATAGAGGAGAAAG  750
                                                        
seq2  --------------------------------------------------  587

seq1  TGGGGAAAAGCCTTGAAGATATGGGCACAGGGGAAAAATTCCTGAACAGA  800
                                                        
seq2  --------------------------------------------------  587

seq1  AGAGCAATGGCTTGTGCTGTAAGATCGAGAATTGACAAATGGGACCTAAT  850
                                                        
seq2  --------------------------------------------------  587

seq1  GAAACTCCAAAGTTTCTGCAAGGCAAAAGACACTGTCTATAAGACAAAAA  900
                                                        
seq2  --------------------------------------------------  587

seq1  GACCACCAACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGG  950
                                                        
seq2  --------------------------------------------------  587

seq1  GGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACCTCAGAAA  1000
                                                        
seq2  --------------------------------------------------  587

seq1  ATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAAT  1047
                                                     
seq2  -----------------------------------------------  587